MSTRG.13775.1.p1 (mRNA) -

Overview
NameMSTRG.13775.1.p1
Unique NameMSTRG.13775.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000111_pilon:1013272..1015262+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13775.1.p1 ID=MSTRG.13775.1.p1|Name=MSTRG.13775.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1991bp|location=Sequence derived from alignment at sc0000111_pilon:1013272..1015262+ (Clytia hemisphaerica_ch_hm2_pilon)
GGGGGTTcaattttcagcggggacaaaaattggagtataattctCCACTG
GGGATGATatctttccagtgggtctgtgagaagggggtgtgaatGAATAA
ACTATTTGGATTTTATTCGTCTTTCAGGAATACCAAAGAAATTCTATAAA
TATGTTTGGTGGATGTAATGTTACCACCCTGGCAGAAACAGATCAAATCG
ATATTCCGGAGATTTCGAAAGCGTTCTTCGTCGTTATCTTTACACTACTA
TCAATAACAGCATCCGTATTGAATATGTTGATCATTTATTTGTTTCTTAC
TAATCGTTCGTTGAGGACAATATCCAATAAATTTATCATATCACTAGCAG
TTGGTAAGTGTGGTTTCTTTCtagtttatcaaaaatataatcaCCTCAAA
TCTCGGGGAATACCTATTCTGAaacacagacctctacaaaactgtATGTA
ATATATATTAGCACAAATCCTTTAGTGGATACCAGCAGCCTTCCCCTTAG
CTCACCTTTTTAATGGTTATGATAGCTTTTGTTCATCCAAATGCTAgcag
attttcaattttatctcgagaaatgtctttaaaaaaaacgagtGTCATAT
ATTCAAGGCTAGTCTAGAATGCCGAATGAATAACTCAGACAAAATATCAT
CGTATTACGCAGATCATAAATGACTAAATTATTCTACAAGGCGTAAAATT
AATTCTTATCTTCGTTCTTTCCATTTTAGGAGATGTTTTGATGGGTACAC
TTCTTGGTCCGTCCAAAATATTTGCTTTGCTCAACATTCAAGATTGTTCG
TTAAAAACTCTCGGCCAAACAGTGACATCCACAATGGCTGTATCAGGAGT
GACCATCGGTTGTATCGCTTACGATCGCTTCTTATACGTTAAATCGATAA
ACCATTATAATAATAAGCGAACTCAGCAATATTTAATGATTCTGGTCATC
GTACCTTGGTTCATGGTCTTAGTACTACTGGCAACGAAACTAGCCTCTGA
GCTGAGTAATGCAGTCATGGCTTTATGTCTAGTTCTTGGAATCTACGCCT
TCATTATATTTTGTTATACAAAACTCATTCAATTGTTACGTAAGAGTGTT
CAAATAGCTGCTAAAAACGAGACTACGACATCAACGACTGCGAATACGGA
ACGGAACTTAAAAATGGTCAGTTTTGTTAAACTTATCCTCGTAACGGCTA
TTGCTTTTACATTCCCAATAGTTATAAATCGAACAATGCATATCATATAT
TTATCCATGGATAAGAACTGGATTTTCTACCAGCGCCGTCAGACCCTAAT
AATCCTCATCACGCATTGTTCGTTTATACTCAATAGCTCTATTAATCCAG
TATTATACTGTTGGAAACACCAAGGCTTTCGTAAAGCATGTAAAAGAACG
TTTAAGAGGCAAGACCAGCAACGAGTCCGATTTGCACGGACGCCGAAAAT
TTATCCATTGGATAATAAGATGGATGGAAGATTAGTAGCAGAGAACTCTC
AAACATCTTAAAATTAACATAATGACAGCACTGAACTTGCAGAACATTAT
GAATTGGGAAACAAGACAATATTTGTATGAAACAAATTGgtgaaatttgg
aaattttattaGACCCTGATTATACCAACgatctgaaaagtttttttaat
aagtccttccgaaaatttttaagccttcggatgttcttatctttttggat
ttttaacatgttcttatttttgccatttttgagtatttttgcccattctC
CTGAGAAATTGGGTGCTTTTAAGTCAAAGCAAATcattaagatgttctta
acttgttcttaataatattttgaccatcgaatccttatgttcttattatc
ATACATTATGTTATACCACACAGGTTTTTTCTGAATTCGAATACGATAAT
TATTATGGAATACCCCCGCGAAACCCATGCCTGGATAATAAATATACTTG
ATAATCATTTTCTAGTCAAAATATTAAGGAGGGACTTTTCT

Coding sequence (CDS) from alignment at sc0000111_pilon:1013272..1015262+

>MSTRG.13775.1.p1 ID=MSTRG.13775.1.p1|Name=MSTRG.13775.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000111_pilon:1013272..1015262+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGGTGGATGTAATGTTACCACCCTGGCAGAAACAGATCAAATCGA
TATTCCGGAGATTTCGAAAGCGTTCTTCGTCGTTATCTTTACACTACTAT
CAATAACAGCATCCGTATTGAATATGTTGATCATTTATTTGTTTCTTACT
AATCGTTCGTTGAGGACAATATCCAATAAATTTATCATATCACTAGCAGT
TGGAGATGTTTTGATGGGTACACTTCTTGGTCCGTCCAAAATATTTGCTT
TGCTCAACATTCAAGATTGTTCGTTAAAAACTCTCGGCCAAACAGTGACA
TCCACAATGGCTGTATCAGGAGTGACCATCGGTTGTATCGCTTACGATCG
CTTCTTATACGTTAAATCGATAAACCATTATAATAATAAGCGAACTCAGC
AATATTTAATGATTCTGGTCATCGTACCTTGGTTCATGGTCTTAGTACTA
CTGGCAACGAAACTAGCCTCTGAGCTGAGTAATGCAGTCATGGCTTTATG
TCTAGTTCTTGGAATCTACGCCTTCATTATATTTTGTTATACAAAACTCA
TTCAATTGTTACGTAAGAGTGTTCAAATAGCTGCTAAAAACGAGACTACG
ACATCAACGACTGCGAATACGGAACGGAACTTAAAAATGGTCAGTTTTGT
TAAACTTATCCTCGTAACGGCTATTGCTTTTACATTCCCAATAGTTATAA
ATCGAACAATGCATATCATATATTTATCCATGGATAAGAACTGGATTTTC
TACCAGCGCCGTCAGACCCTAATAATCCTCATCACGCATTGTTCGTTTAT
ACTCAATAGCTCTATTAATCCAGTATTATACTGTTGGAAACACCAAGGCT
TTCGTAAAGCATGTAAAAGAACGTTTAAGAGGCAAGACCAGCAACGAGTC
CGATTTGCACGGACGCCGAAAATTTATCCATTGGATAATAAGATGGATGG
AAGATTAGTAGCAGAGAACTCTCAAACATCTTAAATGTTTGGTGGATGTA
ATGTTACCACCCTGGCAGAAACAGATCAAATCGATATTCCGGAGATTTCG
AAAGCGTTCTTCGTCGTTATCTTTACACTACTATCAATAACAGCATCCGT
ATTGAATATGTTGATCATTTATTTGTTTCTTACTAATCGTTCGTTGAGGA
CAATATCCAATAAATTTATCATATCACTAGCAGTTGGAGATGTTTTGATG
GGTACACTTCTTGGTCCGTCCAAAATATTTGCTTTGCTCAACATTCAAGA
TTGTTCGTTAAAAACTCTCGGCCAAACAGTGACATCCACAATGGCTGTAT
CAGGAGTGACCATCGGTTGTATCGCTTACGATCGCTTCTTATACGTTAAA
TCGATAAACCATTATAATAATAAGCGAACTCAGCAATATTTAATGATTCT
GGTCATCGTACCTTGGTTCATGGTCTTAGTACTACTGGCAACGAAACTAG
CCTCTGAGCTGAGTAATGCAGTCATGGCTTTATGTCTAGTTCTTGGAATC
TACGCCTTCATTATATTTTGTTATACAAAACTCATTCAATTGTTACGTAA
GAGTGTTCAAATAGCTGCTAAAAACGAGACTACGACATCAACGACTGCGA
ATACGGAACGGAACTTAAAAATGGTCAGTTTTGTTAAACTTATCCTCGTA
ACGGCTATTGCTTTTACATTCCCAATAGTTATAAATCGAACAATGCATAT
CATATATTTATCCATGGATAAGAACTGGATTTTCTACCAGCGCCGTCAGA
CCCTAATAATCCTCATCACGCATTGTTCGTTTATACTCAATAGCTCTATT
AATCCAGTATTATACTGTTGGAAACACCAAGGCTTTCGTAAAGCATGTAA
AAGAACGTTTAAGAGGCAAGACCAGCAACGAGTCCGATTTGCACGGACGC
CGAAAATTTATCCATTGGATAATAAGATGGATGGAAGATTAGTAGCAGAG
AACTCTCAAACATCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13775MSTRG.13775Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13775.1.p1.exon1MSTRG.13775.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13775.1.p1.exon2MSTRG.13775.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13775.1.p1MSTRG.13775.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000111_pilongenomesc0000111_pilon:1013272..1015262 +