MSTRG.13774.1.p1 (mRNA) -

Overview
NameMSTRG.13774.1.p1
Unique NameMSTRG.13774.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000111_pilon:1003046..1004328+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13774.1.p1 ID=MSTRG.13774.1.p1|Name=MSTRG.13774.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1283bp|location=Sequence derived from alignment at sc0000111_pilon:1003046..1004328+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTCAATGATCAAATACATCAAAGGTTTCAAACTATCAAATAAGTCGAAC
AAAGTTGTTGTGAAAACTTTTCCTGGGGCTAAGGTGGATTGTATGAAACA
CTACATTAAACCAACACTAGATAAAAAGCCGGATGCTGTTATCATACACT
GTGGGACAAATGATCTGAAGCTAAAAGAGCCTGAAGACATAGCAGAGAAC
ATCATAGGATTGACGAAAATGGTGAGCGAAGAAAGTAAAGAAACTTGTAT
TTTGGTATCTGGCATTATCCCAAGAGGTGATGATTTAAATCGAAATGTTA
AGAAGGTTAATGAAATTCTGCAGAAAAAGTGTAATGAATGCAATGTTGGC
TTTATTGACAATGAAAATATCGACCCTGAAAGACACTTAAACAACAGCAA
ATTGCATTTAAATGTACATGGAACCAACGAGCTACAGAAAAATCTACAAT
ATTACATTGATTGTTGACATGACCAGCATGAACTAAATGGACCTAGCCTC
GATGGTAAGACAAAGTCTGTGAATCCTctcgaaaatcttaaaaatgaaag
tggtaTCCTTTTTACTTATCTTAACATTGACTCCTTGAGGAACAAAATTG
AAAACGTCAAAGATAAAATCCTTCCTTTTGTAGATATCCTGTGTGTCGCC
GAGACAAAGCTCGACTCCTCTTTCACCGAATCTCAGTTTTTTGTCAAGAA
CTTCAAAAAACCAATACGACTTGACTTTTCCAAAAAGAGTGGAGGTCTTT
TGCTTTATGCCAAAAAAGATCTGCCACTTCGACAGCTAAACGATAACCTA
CTCTCGCAGGGAATCGAATGCTTGACGCTTGAACtaaatttgagaaaatc
aaaatggcttATTCTTTCGATTTATCGAAATCCAAGCCTTCAAAAACTTA
AGCCTTTTCTTGAGGAGTTGACTAAAGTTCTCGATCACTACGGTGCCTCG
TATGAAAACATTTTAATCTTTGGCGATTTTAACGAGGAGATATCagataa
aaatatgttaaaatttttagattctttttccttaaaatctCTAATaaaaa
aaCCGACATGCTTTAAATCAGAGAACGGTAGATGCATTGATTTGATCCTT
ACAAATCGGCCCCTTTGCTTCaaaaaaaGTGGTTCCTTCGATACAGATCT
CAGTGATTACCATCATTTGATATATAGCATGTTCAAAGCTAGTTTTAAAA
AGGCCCCGCCTAAAGTTATAGAATAtagatcttttaaaaattttgatgaa
aagtgtTTCCGGTCGGATCTTTGTCGAAACTTT

Coding sequence (CDS) from alignment at sc0000111_pilon:1003046..1004328+

>MSTRG.13774.1.p1 ID=MSTRG.13774.1.p1|Name=MSTRG.13774.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=465bp|location=Sequence derived from alignment at sc0000111_pilon:1003046..1004328+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAATGATCAAATACATCAAAGGTTTCAAACTATCAAATAAGTCGAACAA
AGTTGTTGTGAAAACTTTTCCTGGGGCTAAGGTGGATTGTATGAAACACT
ACATTAAACCAACACTAGATAAAAAGCCGGATGCTGTTATCATACACTGT
GGGACAAATGATCTGAAGCTAAAAGAGCCTGAAGACATAGCAGAGAACAT
CATAGGATTGACGAAAATGGTGAGCGAAGAAAGTAAAGAAACTTGTATTT
TGGTATCTGGCATTATCCCAAGAGGTGATGATTTAAATCGAAATGTTAAG
AAGGTTAATGAAATTCTGCAGAAAAAGTGTAATGAATGCAATGTTGGCTT
TATTGACAATGAAAATATCGACCCTGAAAGACACTTAAACAACAGCAAAT
TGCATTTAAATGTACATGGAACCAACGAGCTACAGAAAAATCTACAATAT
TACATTGATTGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13774MSTRG.13774Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13774.1.p1.exon1MSTRG.13774.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13774.1.p1MSTRG.13774.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000111_pilongenomesc0000111_pilon:1003046..1004328 +