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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:965648..973278+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13771.2.p1 ID=MSTRG.13771.2.p1|Name=MSTRG.13771.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7631bp|location=Sequence derived from alignment at sc0000111_pilon:965648..973278+ (Clytia hemisphaerica_ch_hm2_pilon)
gaaaatactcACAAGCTTCGGAAGATTCAGATATCTCCTCTTCCATTTCT
TGAAAATAGATTTATGGCAGAGTGAAATGATGCACAGTCAGACTTTCAGA
AGTGTAATCTGGCAATCTCGTCTCAAAACGAAAGTTCGTAAAAATTTTGG
TACCATTATGAATTTTAGGAAGCTCATTCAAAAAGTACTACCTTAGCTAA
TTCCAGGCATTCCAGGCCGTTTTGAAAACTTCCATACTTTTGAAGTACAC
TATCTTGAACTTTTTTGTTGACAAACAAAGCGAGTCTTCCcgctgttttt
attttatcggtCGTCATTATAGCCGGTTCTCCCCCTCCCCCTCTAGTTTT
AATGTCAAGATGGCGGCGAAGAAGTGCCTGAATTTTGAGATTGATTATTT
TGTTGACATCGCACGCCAAATTGCTTACAAAAGGTTCATACACAAAAAGT
ATTGGTGAGTGTTCTTAATGTTTTTAGACCTTTTAGCTTTTCTGGTTTAT
TGGGTACCGTGAAgtcttgcatcagtggagggtaacTTGCATGATGTGAA
GTCGGGtataatataggtatataaacttagtatatatataAACTTGCATA
TCAGTCGatatcagtggaggctaacatgcatagccctcaaatgaatgacc
tggatggtccttaaaatacaaagttaaatcaaaacaaaaatggtatagta
gagctgcgagcggagctgcgtggttcatttgttttgaaattttgctgctt
tgttttgattggtcagtcatttcaGGGCTATGCATGAGCATgtttagcaa
ctccagaagatctttttcaaaatctatcctatcttttagagctttgaaaa
agaaagaaaatgaggggtcataggcctccagaggattagtggttgtaaag
atattcaaattttagtgtcaaaaatttgactaataatgtcaaaaaaaagg
ttaggaaaatagcttggaaaaattcgaaaaatatgtcaaaaaagaaaaaa
aagaaattttccagtcatgcttcttaaattttgcatatctctttttctag
tgtagctagagacctcaaatttggagggagaattcgttgatggtgttaaa
atattattatataaaaatacaactacacagctccgctcgcagctctgctc
taccatttttgttttgatttaattttgtattttaatgaccagtcaggtct
ttcatttgagggctatgcgtgttagcctccactgatgcaagttacccaat
ctcacggtagtatatttatcaaaataaggaaagatatatctttttttgaa
aaaagaagacattgcattgttttatttttgtttttgaagaaaatagcttg
gaaaaggttgaactGAGTCAagaaaggtggtaggacccattttcaagggg
cctctggaaatggaggaacaaaaacttatgagtaaagaataagtttttct
gaaaggagaaaccccacatgaaaagaaaatccatttcggcagaaataaaa
acttttttttggacattcccatgctaaagaagcaaaaaagttaaaaaaac
tacatgaaaatgaaagaactagaattagcgattgtgatttttgaattcct
caccctttttctgataaacatacaaagtttcagcctccaaattagatttt
cctccgtttccagacacatttgttcttcgatagttgcaaattttttttct
cccgtcggcaaacaattttcaaaatgttgtaaaaacgttcagcattttac
caatttgctgtctagcccgtgtccacagtgttatataccgctggaaagct
ttaagatcacgggctttcatttagtaaaaaccggaacgctttagcataca
tagaaaaaaagttccaagggttcaaagttcacggaaaaatgaaacatttg
ttttgacgtcaacgaaagttgcatgacttctggagtcgctagcATGTTAG
CctcctccactgatgcaagttacccgacttcacggtagccATCAGTGGGG
CCCCCCATCAgtttgcatgaatgcgtgaatgggcattttcggttgcatga
atgcgtgaaaattgaaaaaaaataagtgaATGCGtcaattgaaaaaactt
gcttgaacatgaaaattcactttgcgtgaatgcgtgaaccTAGGAACCta
ggctattttgtgcgtgaataagtgaattttcccttttttccactgaTTGC
Agtgttcccgattttccaatgtttccctgatttttccctaaaattttccc
attttctgaaaaattggattaATGCGTGAAACTCGatgaaaatttgcgtg
aatgcgtgaatttcgaaaaaaaatagcgtgattgcgtgaattgagggtcc
gctgggggagCCTCATCAGTCGCCattaaacttaaactcctatatcagga
ttagaaactaggctagtcttacctcttttatcttttcctttagggagggg
agccgtccatattcatttgacaacgcaaaacatcaaattgacgttatgag
tGGGaggggggttttcaaaagttaggtttgacgttataagaaatcaaagg
tatacctttttgtgaaaatcgcaGATACTTGtaaccaccaaccacactat
acTTTATAAGCTTTCGAAAACATATTCGTGTATgaaatacatgaaaattt
gctgctcgcataatcccattggttcgcgctatgatatcattacatcatat
tttcattgtttgcgcggtcgagcgaaccacatcgcacaagttggcaaaga
aggtggtacgcCTAAAGCACGGCACAGCACGGACCTAGCGCCAAGTgaag
cttttaatttctttttaaaataaaagtcattagttaaaagaacacataca
cgcaCGGGTACAACCAAGTACGGACTTTGCGATGGaacgggaaaactttg
atgaaaaatggctacaacttttggtatacatcAGTATCGCTTGACGTTAT
ATGTggggggtggggggttcagaggataacgtcaatttgacgttttgcct
tgtcaaatgaatatggacgggtccccttacaacaatacaatgctgacaag
ttgacacaacacatgtgtacatgtacattgacaagtaatccctgagagaa
gtttatattgaaatctgcaacaaaaacgaaagtggtctcttctactgatt
gcttcccagcgctcctttgcagctgtttatcaaatttccaccaatgacgT
TGCGGATTTCAAacagcccttctttttggcacccgtggcctttcagtgcc
ttgcatgacgggcggctgtaaaatcccacccttcatatattcgTTTCGAT
CCATGAtctgtggcttaggttttttctcatcttcaatttactgaagaaag
aagaaagcggtgatttgatgcgagagttagattgtcaacaaagtgccgta
aaaaattattgaataaaagaagaaaagaacttttaaaaatcttaaataat
ttcattttgaagaataggtgcaaaaaagtgaaacatagaaaagtttagat
ttggaaaattttcaatgtttagttttttgcacaaacccctgtaactatgg
gcaagcaccccgttgctaagatgctggcttgaaatcgaaaatgaaaccac
tcaaaaaaaagaaagtaaaacgtATTCGAAATCCAGTAATCTTGATATAT
GAGTCTATACTGGTCATCAAATGACTAGctaactgaccaatcaaagcaat
tAAAAACGCAGCTCCGTTCGCAGCTCTACtctgccatttttgttttgatt
taactttgtattttaaggaccagccatgagtcattcatttgagggctatg
ttagcctcaactgatgcaagttacccgatctcacggtataggTTATGTAC
AGATATTTGCTGTCGTGATCGGGGCCCTCCCCCCACTAGCGGACGCAATC
CTtacttagctttccagcggcgTATAACACTGAGGCTCGGAATTCTCAGG
TTAGAAAAACCAAATTAGGAAACCGAGTTAGCAAAAAGCCAAGTTAtgat
agcaactccagaagatttttcaaattttcttttttttttcaaaaccttat
cttatcttgtagagctttgaaaaagaaagaaaatgaggggtcataggcct
ccagaggataagtggttccggcaactgctctaacttgggacgattggttg
aaacatgatATCTGATCTGTATTTTTACTTGctgttaaatctctttaaca
actaatttgttttgataactccaccaagtttatcaatcatactttttcgt
tcctcttagagtgcacagacactcgcgtgtgCTCCACTTTAGAttgtttt
cataatttaatttaaaagcctactcggtgcgaaagagaaattttgtattt
tttaaagccccgttcattaactcaaattaaatgactttggaggttcggtg
aaatggtggccgaattgccgtcccatgttttatcagatagtcccaagtta
gagcagttgacggttgtaaagatattcaaattttagtatcgaaaatttga
ctaaaaatgtcaaaaaaaagggttaggaaaatagcttggaaaaattcgaa
aaatgtgtcaaaaaaaaaaaaagaaaaatttttcagtcTTACTTCTTTAA
TTtagcatatctctttttctagtgtagctagagacctgaaatttggaggg
agaattctttgatggtgttagaatttattattatataaaaatatttataa
aatatttagtatatatcaaaataacgaattatatctttttttgaaaaaag
aagacattgcattgttttatttttgtttctgaaAAGAAAGTAGTATCCAG
ATAGCTTGGATAGCTTGGTTCTTTAACCCTAAcctgttttgacatttttt
gtcaaattttcgacactaaaatttgaatatctttacaaccacttatcttC
TGAAGTTTTGAccttcatgaatttttttttttaattgtatcAAAAAAGAG
TACAGTATGCTACGTTTTTAAGAacacatttctttgttttgtgattattt
ctttttgaattattaaccctttccggacgcacgggccactgggtggccca
tgaatcgtgttcctatatgacgcacgggccaccgggtggcccatagcctt
gtaaaagattttaacagttttcgcACCAAAATACAgtaacatggttttga
ataatgattttgagataaatttcccgtaacctgcaaaaaaacgcttttcc
atatcttgtttacaacaaaaattaaaaatgttcaatgtttgttgcaaatt
tactcaggctaaatctgtaagggaaaaattgctcaaaaatttggacaaaa
aatcactttactcagattcttggaaagcttatgacatgaaatttttttta
ctgttcaaaaattcaattctctaaatcatatttaaagttcaaggcgtaaa
gcaaatgccttttactctatttctttattcaaagtcaaaaactttgtctt
tccgaaaaaaaatttgccgatttttcggtcacgtgaccaggtgtcagcca
tatttaaaaattcttttttggtaTTACTTAccgtgatatcttttatcaat
cactttctattgcaactttagtgaagccagtcaaaaacTGAGtttttgtt
tgcgtcatatagcggtgaaatcatgcgtccggaaagggttaagtttgatc
ttttattgttttaatcTTCTCAAGGTACTTTGTTggctttgtgtaaactt
gcttatgttttgcatattttctaACTAAAttcaaccacggctttttcgtt
cctctatttttgcatataaTCTTTTATGGGGGATGGAAAAGCTTTGATCA
CTCTCAATTATtcagaaaaacacaagaaaatctAAATCTGTTGTTACACA
TGCAACAGTCGGATTGTCTTTTCTTTGAAATGTGACAACTCAACTGAGGA
ACTTGGATGCctaatcaattttcaaatatcttttttttttcactaaaagg
acctaaaagaaaaaattgattagACTCATTAACTCCCAAGTTTAATAATT
TTGTTAGCATGAtttaaaatgcaaaatttttgagtttctttttaccGTTA
GAAAGTTCACTGCACCTTTGGAATACTAATAGTATTATTTCTTCAACGTT
TTGCTATAACtactctaaaaaagattaatttcttatgttttttatctctt
ttacaaCCAAATAGAGTGTAACAGTAAGAATAGTTGGAGCGCATGTGAGG
TCACAAAATCAACAGAGGGGGAGTTTTTCTCCATTGTAGAGTCAAAATTG
TGAGAAATTAAAGATTGAATAACTcaatgaataaaagacattatgaagtg
gttctttttttgtttgatcacatttttcttcctctttgatgtttcgaaaa
aaaatctcagggTTAATTCCAAACATTAATTCCCCTTTAATGGATGCATT
GTACTGCTTTTGTGCttttttggtttggttttgtgAAGAAATGGTCTGTT
ATctcattaaatgttttttcaatttaagGTGTATCTTAATTAgaccattt
ttttttatttttcatttattcagGAATGTAGTTCTACATGCAGTCGCTTC
AGTTTTAGTTGTGTGGTcagcatttttcatttcatcgtgTTTTCTACCAT
ATTTCTTGTGCCatctcaatttgatttttattttggttttgtgCATTGTT
CAAGATGTCCATGCAGGGGTATGACTATCATTTTCTCTCGTGTTTAAAAT
TCTAGAAACTGTTTAAAATGcaacatgttttttcttttataagcataacg
tttataagcatagtGATAGGAAGGCTCAGTTTTTGGCTCTTTCGTTTGAG
Aacctagaatgctaagcataatgcaaacctgatatagggacagacacttg
cttataaaaaaacatataattgAGTTAAAAACTTATTATTTATTTTGCTC
TGTGTGATATATTTGTAAACATCtcacaaataaaaatatttaaatcataA
ATAGTTTTGTGGTTACTGTGACTTAGTAATGGCCAGAAGACATAGGAAAA
TTGAATCAAATTTGAGTTTCATAATTCGTTTCCAGCTTGCATCTCTGCTG
GTTTACCCTGTATTGTATTACCATGCTTTATACGTCACTGATGCTACATT
CTTACAAGTAGTAAGTTTAGCTATCCTTATTTACATCATACAAAATTTTG
TGGGACAACAATGGATTGAATGTGTGGACCAAATCACGCAGAATACAATC
AAAAGTGTGGATCCTAATTTCTTAGCTGCTGACTTGTACAATGAAGTgtt
tctatcattctatcataacATGATCACGTTACTCATCCGCATGGATTTTC
GAATGGACTTGCATGATCGATCGAATGTTGCCTTGAGACAAGTTTTGGAC
CGAATGAAAAAGACACCATAGTTTACTGTGCCTCtgtaaaaatccaattt
ttaagaCTAATTGAGCGGGATCAGTTATATTTATTTAGAATGTGTTTCAC
TATCTATActgtattatttaaaaaaattttaatcattctatatttttata
aattttgatccAGAAGGTATGAATAGTGGGATGGATTCTAAGCTCGGGAA
GGAAAGTAGTTTAAATTTGTAGAGGGCATAAAATTGCcttttttcacttc
atttttttggctgggattttacagattttcg Coding sequence (CDS) from alignment at sc0000111_pilon:965648..973278+ >MSTRG.13771.2.p1 ID=MSTRG.13771.2.p1|Name=MSTRG.13771.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1728bp|location=Sequence derived from alignment at sc0000111_pilon:965648..973278+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGCGAAGAAGTGCCTGAATTTTGAGATTGATTATTTTGTTGACAT
CGCACGCCAAATTGCTTACAAAAGGTTCATACACAAAAAGTATTGGAATG
TAGTTCTACATGCAGTCGCTTCAGTTTTAGTTGTGTGGTcagcatttttc
atttcatcgtgTTTTCTACCATATTTCTTGTGCCatctcaatttgatttt
tattttggttttgtgCATTGTTCAAGATGTCCATGCAGGGCTTGCATCTC
TGCTGGTTTACCCTGTATTGTATTACCATGCTTTATACGTCACTGATGCT
ACATTCTTACAAGTAGTAAGTTTAGCTATCCTTATTTACATCATACAAAA
TTTTGTGGGACAACAATGGATTGAATGTGTGGACCAAATCACGCAGAATA
CAATCAAAAGTGTGGATCCTAATTTCTTAGCTGCTGACTTGTACAATGAA
GTgtttctatcattctatcataacATGATCACGTTACTCATCCGCATGGA
TTTTCGAATGGACTTGCATGATCGATCGAATGTTGCCTTGAGACAAGTTT
TGGACCGAATGAAAAAGACACCATAGATGGCGGCGAAGAAGTGCCTGAAT
TTTGAGATTGATTATTTTGTTGACATCGCACGCCAAATTGCTTACAAAAG
GTTCATACACAAAAAGTATTGGAATGTAGTTCTACATGCAGTCGCTTCAG
TTTTAGTTGTGTGGTcagcatttttcatttcatcgtgTTTTCTACCATAT
TTCTTGTGCCatctcaatttgatttttattttggttttgtgCATTGTTCA
AGATGTCCATGCAGGGCTTGCATCTCTGCTGGTTTACCCTGTATTGTATT
ACCATGCTTTATACGTCACTGATGCTACATTCTTACAAGTAGTAAGTTTA
GCTATCCTTATTTACATCATACAAAATTTTGTGGGACAACAATGGATTGA
ATGTGTGGACCAAATCACGCAGAATACAATCAAAAGTGTGGATCCTAATT
TCTTAGCTGCTGACTTGTACAATGAAGTgtttctatcattctatcataac
ATGATCACGTTACTCATCCGCATGGATTTTCGAATGGACTTGCATGATCG
ATCGAATGTTGCCTTGAGACAAGTTTTGGACCGAATGAAAAAGACACCAT
AGATGGCGGCGAAGAAGTGCCTGAATTTTGAGATTGATTATTTTGTTGAC
ATCGCACGCCAAATTGCTTACAAAAGGTTCATACACAAAAAGTATTGGAA
TGTAGTTCTACATGCAGTCGCTTCAGTTTTAGTTGTGTGGTcagcatttt
tcatttcatcgtgTTTTCTACCATATTTCTTGTGCCatctcaatttgatt
tttattttggttttgtgCATTGTTCAAGATGTCCATGCAGGGCTTGCATC
TCTGCTGGTTTACCCTGTATTGTATTACCATGCTTTATACGTCACTGATG
CTACATTCTTACAAGTAGTAAGTTTAGCTATCCTTATTTACATCATACAA
AATTTTGTGGGACAACAATGGATTGAATGTGTGGACCAAATCACGCAGAA
TACAATCAAAAGTGTGGATCCTAATTTCTTAGCTGCTGACTTGTACAATG
AAGTgtttctatcattctatcataacATGATCACGTTACTCATCCGCATG
GATTTTCGAATGGACTTGCATGATCGATCGAATGTTGCCTTGAGACAAGT
TTTGGACCGAATGAAAAAGACACCATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000111_pilon | genome | sc0000111_pilon:965648..973278 + |
|
