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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:741574..747145+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13760.1.p1 ID=MSTRG.13760.1.p1|Name=MSTRG.13760.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5572bp|location=Sequence derived from alignment at sc0000111_pilon:741574..747145+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGGAAAAATTTGCAATAgtaataaaataatatatttgaAGTATTGAAGA
GAGAAATACAGATATACTCAACGAAAGGCATTAAATTAATACTGAATTAA
TGCAGAATTTTTTCACACATGCTGTAGAGAAGACCTgaatttttgaagat
atttcatTTCACCAAGATTAATTAATCAgaggtaaaattatttttgaatt
tcttccattttttcatcaaaataatttacttttagGTAGGTATTATATAC
CTCTTGGGACTATTAGTTAGAGTAATTATTAGAGTTTAGGAGGATTTCAC
gaaagttttttcatttcacgcattcacgcaagtttttccaattcacgcat
tcatgcactttattttcaatttgcaCGCATTCACGCATCCAAAAAATccc
attcacgcaaaccactggggCTGGCAGGGGGCTCATTTTAGATTAAAAGA
CGACTTTTGCTGATTGGGACCCAAGGCTGTTTACCATATGGTGATGtata
aaaaccggaacgctgtTAGCTAGGGCGGGGATGTAATATGCCACGCTACT
TAAATTATTTAAGCGTTTTAGAGAGTTAGAGCTGCGGCTAGATAAACACT
TTTAGTTTAACGTTCAAacatttttgtagaaaaggaaGCACAGTGTTGAT
CGTGgtgattttataaattttccaaTTACTGCAAAAGCAATAATATTTTG
GTCGCTACGTATTGAATTTGCGCATAGAATTCAGTATGTAAAATTATGAA
TTCATGTGtttttttACGATTTTAAATCAGCCGTACGGCGTTTGTCATGG
TCATTTCATTTCCGTCGGTGTCTTTTGTAgtcaaaaaatcaatgaaaaac
ttaaaattgtgatactccgtgaaaatccaaagtaaaaatAGCGCGGTTAC
GGCTTTTTCAAAGGAGGGCAGAACAAAAGAGGGACGCAGACAAGAGAATT
ATTCAATTATGTTTAAACAATGTATATGTGACAAACCAATAATCGAATCC
ATTAATTACTAATAattatttcattcaaaagaatttaaattggttAATTT
CAATTGCCATTCATTGATTTCATTAAGAtaattaaaaggtttttttagat
tctaaaattgaataattaaatagATATTCTCCCCGGGTCaagtttataat
ttttttggaaaatttttttattgaaaagatagcgaaaacaataatttctt
ttcagtcaattttttgtgaaataattTGCGAAGGGAATATTTTTTCGTAA
TATTATACATTTCATAATGAGATCCAATTGATTCgcaaaaaaattacctt
ggATTCAATATCAAAATCTGGTTTCCGTTTCACAGGGCGTGACCTttcga
aaattctgaaaaacagaaatttttaaaaaatcacaaaaaatttaaaaata
tgagaatattctttttattaaaatttaagataaattattaaaaatacatA
CAAGTCATAAAGagcagaattaaaattttttcaagtcaaatgTGAAACAT
TCAATATTGAAGAGTCTTAACTCCCTTTAAAGCAATTATTGATATGCGTA
ATGTTAAACATCTTTctaacggaaacacccgaaaaaagccGGAATTTGAC
GCCTGTCTGTTACTAAAATAGAAACACGATGGTCAAAACCTGGCTTTTTT
CGGGTGCTTCCATTAGAAAATATGATGTTATCTTGACTTGTACATACCAA
GAATACCTTCAAATAATTTTGACAAGTAATTTAAGTTAAGAGGACTCAAT
CTTCTTATAAAACATGCTTTAGATTTTTCTGTATCATACTTTAAGAATAT
CAAATTCGTCTgagttaaataaaaaaacgcTTAACACGATTTCACGCGAT
ATGCAATGTGTCACACGGAAAAACCACTGATTGCAACAATGCAACATCTT
TATATGCTAAATCTGAATGTTAACACATTTAggactttaaaaaaatgaaa
ttgaaattttttaatcgttcctatcctaaaattgacttttttaaaaGTCT
GTTGGGGAGCCCCTTGCAACGTGTTCCAGAGGGAAAATGGGCGAAGAGAA
TCAAGTAAATTCTAGCTCCAAATGAATTAAACTAAAATCGGATGGAATTA
TAAAATGAATACCTTCAATTTCAACTAGTATCAACTTTTAAAGGGATTTT
GGTCAATATAGTTACCACAATCTAATAAAAAATCATGACCTTTTACTATC
CATTAGACAAGTGTGTGTGTGCGAACTTGTAATAAACTTTATTTTAAGGA
GTTCATTCAAGGAGTCCCAGCAGATTGTTGAGAACTGGGACACATGAGCT
TTCTCGTATTCGACTTTAAAatcacgaaataaattcaaaagttaACATTT
CCGATTTTGATTCGAATACGCCGAGGTAAACCTTCATTGAGAAATCATTT
AACGGTAAGAAATTGGtttctctttaactcgaaactctataatttgaatg
tcaccttaactcaaacaagttttttcTGGTCccttaacaatgccttataa
accttactccgaCCCGTGACTTTTCGAGTTACATTTGTTGATATATTTAA
CACAAATCTGCCCTTTCAAGTAACAAACCCATATAAACAAGTAGAATTTT
CCATAGCTCGAAtatatacaataaaaatatAACGTAAATAACTTGAAAAC
TTTAAGGCGCGATttaaaaccgagttaaaaacaccaaataactcgaaaag
ttaaaagctcaaaaacaaaaactagaCTTATTATTTTGGGATAATCTCTC
ATGCTATATTCTGTTTAAACTCTACTACCGATAATGCAAAATAAAGttag
aaaaaaacaactttagGTATCATAAGGTATCATTGaatcaatttttctta
aaaaaaaatagggaaaaattaGTCAATGAGACCATTCGACCTAGAAAAGT
ggagattcttataaaataattgTGTAAGAACTATAtacgaaaattttcta
aatattcTAAGTTGCAACACCTTGATAGAAATTCTCTACTCAGTGCATTT
CGAGTGTGAAAGATATACCGCCAAATCAAGGTGGCATCAGTCATTTCTTA
AGTTAATGCAGtttttttCGTTACGATAATACAGGTCttcaatgtttttt
gtttttttttttcgttaaaatTGTTTCCTTCTTCAAGCAgagattcgaat
ttttttttaagttatgGCAATAACAACTAGATGACATGATTTTTGCgacg
aaaacatttcaaaactgCTGTGGCTAACATGACCTGCAGGTACATGACCT
GGAAATGACCTCCGTCATTGCCAATTGGCTGTTACCAATTTTGGACGCCT
GTTAATCGagtctttctataatttgaatctctcCCAGTGTTTGAACAAAt
taaaataatgaagaattatttttgaaagcAGTTATGATGCAAACAAAGAT
TCTTTAAACTGACCAGACTAGcgcatttgaaaaattggaaaaacctctac
agacagcaatatttttgaactatttcaaaatgattgaaaaacctttcaaa
cattttttagaaaatatgacATGGCGGCTTTTAgtaccgttggaaaggta
tttttataCTTTCTTAACCATTTGGTACAGCGCTTTGTCTTTCAATTAAG
TGGTCAGAAGTTATGACTTCATGTTTCCAGTAACTGAAAGGATTTATTGA
ATcttgaatataattattttttcttaaccttaCAATATCTACCttttttt
CCTTTAGATTTCCTACAAATCTGCTGACATCAATCCAGAAAACACCGTAT
CAAACGAAGCAAACAACAAGTCAAAAAACAGGTGTTACACTTTGGAAATA
ACAATATCCACAGATATTTCCGACAAATTTCTCAACAACTATTTCAGAAA
TCACAAAGGACATCGAATTAAGGAAATAGCGAACAAACGTCTATGAAGCG
AGTCCGCTCAAAGAATCTATCAGTGACCAACAAAGCAAGAAGTATGGAGC
ATACACCACAAGATATGCAAGAACTCAATGAAGAAATGCTTTCTTATAGC
ATGGAGCATGCACCACATTCACCATCAGGTCATCGGCACCGTCACGGCTC
CACCTCGATGACCATGCAAAGTGGCTTTTCAGACGAGAGCGGTGTTGACA
AATCGGATAAAATCAAACGCCCTATGAACGCCTTCATGCTTTGGTCGAAA
CTGAGACGTCGCGAGATTTCCAAAAATGACCCCACCATACATAACGCTCA
AATCAGTAAGCTGTTAGGTGAAGAATGGAAGGTCCTATCGACAGAAGACA
AGCAACCGTTCCTGAGAGAGTCACAAAAACTGATGGCCAAGCACAAGAAG
GAGCACCCCAACTATCGATACAAACCACGCAAAAATAAACAAGAGCGAGG
TCATACATCAGGAGGTGGATCATACCATCAGAAAGCTTTCTCCTTACCAA
GCCAAGCTAAACCGTATATGAAATACTCTTCATATCACCACCATTACAGA
CCATCGCAATCACGTTCGATGGTGGATGATCGTAGACCACCGTCACCGCC
CACACACCACCCGGTTGTTTATTATCAATACCGTAAATGTCACGTGCCCG
GTTGCTACGATTGTGAATATCAACGCGCCTATGAGTCGCACGGTCCAAGT
CCGCCATCTTTCTGTTGCCGTGGTAGCGGTTATGAAAAATCGAACACGCA
TGCGTCGAGACGTTGCATGTGTTGCTCTCCACCACCCTATCACCAACCCG
CCTGCATGGGGTGTAACCGCCAAAGCCCACCACCACCCTCCTCAAATCAG
CAACGAAATAACAGCTTTACAGTTGAATCTCTCATCAACGATCGAGGCTA
TAACTCATCTGGTAAATCGACATGCACTAGCTCGTGTTCCAATGGATCGA
CGTCACCAAGCACCAGCCTAAGGTCGTCAGCAGAGAATGACACAAAGGGA
TCGGATGGGTCTGGGCCCGAAGAATCTTAACTCTCAACAAACAcgaatta
aaaatgacaaaatgttAATGAGTCTGAAACATTATGAGAAATTTGGGTgt
aattttttgttcttttttatagcggtgtatattatattaaaaataatCTA
ATTTGGTTTTAAGATTGAAATATCAGATGAACGGTGCTTACGTTGcaaat
tcatttgaaaaattttagaaattctaTGATTTGACAAATATTTACTCAAA
TTAATACATAATGATTTGGTGAAAAAAGGTGCCGATCATAAAATAAGACG
TTTCTGTCTCAATGTGCGGGAGTCATTTGTTTTAGTTTAATAAAAACCGA
TGATATTGGAGGATAACTTTATCTATTCAGCTTTAAATGGGGATGATGTT
GTCATTGGAGACTATTTTTAGCCCAATTTTCCAAATCTAGGAGAGGTCTG
GGTCTGTGATACATGGGGTGTAAAATGTAACAGTAATAATAACGTATTAC
AGGCTGGAAAGAAAATATATCGtctaatttattattttttaaatgatttt
aattgtacataattaacgataattttttttaacgaaATCCAGAATCAAAG
GAAAACTTTAATTGCTTTACTACTAATAAAGATATCAAGTATGCGTTCTA
AAAAACATCCTTTTTTAATACA Coding sequence (CDS) from alignment at sc0000111_pilon:741574..747145+ >MSTRG.13760.1.p1 ID=MSTRG.13760.1.p1|Name=MSTRG.13760.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000111_pilon:741574..747145+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCGAGTCCGCTCAAAGAATCTATCAGTGACCAACAAAGCAAGAAG
TATGGAGCATACACCACAAGATATGCAAGAACTCAATGAAGAAATGCTTT
CTTATAGCATGGAGCATGCACCACATTCACCATCAGGTCATCGGCACCGT
CACGGCTCCACCTCGATGACCATGCAAAGTGGCTTTTCAGACGAGAGCGG
TGTTGACAAATCGGATAAAATCAAACGCCCTATGAACGCCTTCATGCTTT
GGTCGAAACTGAGACGTCGCGAGATTTCCAAAAATGACCCCACCATACAT
AACGCTCAAATCAGTAAGCTGTTAGGTGAAGAATGGAAGGTCCTATCGAC
AGAAGACAAGCAACCGTTCCTGAGAGAGTCACAAAAACTGATGGCCAAGC
ACAAGAAGGAGCACCCCAACTATCGATACAAACCACGCAAAAATAAACAA
GAGCGAGGTCATACATCAGGAGGTGGATCATACCATCAGAAAGCTTTCTC
CTTACCAAGCCAAGCTAAACCGTATATGAAATACTCTTCATATCACCACC
ATTACAGACCATCGCAATCACGTTCGATGGTGGATGATCGTAGACCACCG
TCACCGCCCACACACCACCCGGTTGTTTATTATCAATACCGTAAATGTCA
CGTGCCCGGTTGCTACGATTGTGAATATCAACGCGCCTATGAGTCGCACG
GTCCAAGTCCGCCATCTTTCTGTTGCCGTGGTAGCGGTTATGAAAAATCG
AACACGCATGCGTCGAGACGTTGCATGTGTTGCTCTCCACCACCCTATCA
CCAACCCGCCTGCATGGGGTGTAACCGCCAAAGCCCACCACCACCCTCCT
CAAATCAGCAACGAAATAACAGCTTTACAGTTGAATCTCTCATCAACGAT
CGAGGCTATAACTCATCTGGTAAATCGACATGCACTAGCTCGTGTTCCAA
TGGATCGACGTCACCAAGCACCAGCCTAAGGTCGTCAGCAGAGAATGACA
CAAAGGGATCGGATGGGTCTGGGCCCGAAGAATCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000111_pilon | genome | sc0000111_pilon:741574..747145 + |
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