MSTRG.13757.10.p1 (mRNA) -

Overview
NameMSTRG.13757.10.p1
Unique NameMSTRG.13757.10.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000111_pilon:652373..655134+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13757.10.p1 ID=MSTRG.13757.10.p1|Name=MSTRG.13757.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2762bp|location=Sequence derived from alignment at sc0000111_pilon:652373..655134+ (Clytia hemisphaerica_ch_hm2_pilon)
GGTTACACTTGTTCAAAATGGGAAAATGATACCTTTTGCTACCCACCCCA
TATTGGCAGTAACGTTGGAGTGACAATTTCTGACAGGACTTGCGACGCCG
TGGTTCCTCCATTCAAAGATACTGTACAAATTCAAACAACACCCTGCAAT
TCGACTTACGGTATATAATTTTGATCGTCTTTGAgctgttgtttttgttt
gattgtttgaaaaaaaaaaatcttttatgaaACACagagaattttcgaaa
aaatctaaaatatctGGCAacaatatttggcaaccaggggttacctaaat
cttagggggcacctaaaacctgatACCAAGCCATGTGTTAGTTTTAGACA
ATCGATTTTCTGTCCTAATTATTCTAATTTAGGATACACAACCCTGTAAT
GTATTCCATAAGATGGTTAAACCATAGCCTGGTTAATTCGTCCAGTTTTT
ACAAGACCAAGATACGGCTGACGGCAATAtagctttaatgatttttatga
tgtacggaattttaagcttgtcttgaaaatgatattcagtcacaacttac
catcagattttaccaagtggctgaatcaatctggcttaCATTTCTAGGCT
AGTTAAAcccccccTCCCATGAGCTCTATGTGGgcgcttcactttttttt
ttgcaaaattttaccTGATAATTTCGTTATAGAATGGAAGTCATGGTCTG
ATTGGTCGAAATGTGAACCAATCAACGCGACGGAATCCTTGTATGGTGAC
GGGACACGATATCGAACAGCTGTAGATTGCCAGGATGAAAACGGTGAAAA
AGTTGATGATTACTGGTGCGGTGAAAATGCCACAATCTATCATTTGAATT
CGTGTTATGTTTTCAATGAGAGTAAGttaaacttaaaggttttgttttca
aataagagtgataaaacctttaaaagggttagaaaaacactaactaaacc
cacaaccgaactaaaacttaaaagcgttaaccaaactaattaaactGATC
AACGAACTAAACAAACTCCTTAAACTTAGAAACCCATAGATGTTTCAATG
TCAATCTTATGCCACTTTGATTGGAAAAGAGTTTGCGGGAATTGAGTATC
CAGTGAGTATACATTCCCGAGGAAGAATTCTACCCCTGATCATTCTTTTC
TGCTGCCCCCCTCCTGGTGTCGCCCTGTTtgagaaaattatatttctcat
CTCCACTAGGGCTTTTCTGAAGGTCCTAATGGGGCTTTTAACTAAGAGGA
GTTCAAATTATAGTAGTAATTGCATTATGATGGGATAGTAGTTTGCTTGG
ATCAATAAAATTGAGGTATGCAAAGCCAAGCAAGGCTCACAGAACGTCTC
AATAACATAACATAAACATTGAAATAACGTTTATCACGTTTTACCAATTT
GAGAATATTTGGCATCAGCACATCAGCTGCAAACTCTACCTCATAAAAAG
CAAACTCAATACACCTATTGAAGTCAATCTTTCCTGGTCAACTCTGATAC
AGTCTCCAATCAGCCTCTGAAAACCCTATGTACCGCATTCTACGGCCTGT
CAGCATTTAGAATTTGTTAAGCCACGAAAAGCTcttaaatcttaattttt
tttcaatcatttagCGGAATATCAATACAGTGATTACTTCTGGTCGGAGA
TGTCAGAATGtgaaatttacagaccagaattacAAGGAGTTCCAGAAACC
AATGAACAGTGTGGAAATGGATTTCAATATTCCAATCAAACATATTGTAC
TATGGGTGAATACCAGGAGCATCCACCACAGAACGAAAGTCTTTGTCCAC
CTGCTGGTTACATTGTGAAAGCGTGTTACGTACCTTGCAAAGGAGGTATG
TAGTTATTTTGTTCACTATAGATCCTTCTTTAAAACTGCAACATCGAAAA
TCGAGGAcgttaaccctattagccccggggctagaatctaccacgctgga
gttcttttgtgtatatctcggagaaatgttttaaacgacttgaaactttc
tgacctTGAACAAAATCTTATTGAGAgtatttgtgcaaaattttagggtc
atagcttgtccagatcaggttctatgactttattgtgaaacatgacataa
aacccagctaaaatcgctcaaaactcaaaattttaaagtgctgataacta
tttattcaatcatcttcaaattttgacacgtgataggtattgacaatata
aatttgaaaaaaagaaaaagaaaattttaaaaataatgacgtcatcattt
ataacgtcatcaaattttgaaaattttattcatcttcagcacagatttta
agataaagcggggggggggggtaataaAATCTTCATGTAAAATgaaaaac
cggcaattatgttaaaggacagccttttatctttcagaatcttttaatag
aatctaaatatctttattggttcgattgtaatagacatttttgtaaacca
tatattttcgctttttttccgacaggtggaaattttagGATGACGTCATC
GGCTTTTGAAAGACggcatcattttttttttgttccaggAAATTTATGTC
ATggtggagaacatctgtaccaaatttcatgaccgtAGCTCtcctagatc
aaaaataatcgagggtggtatattctaccctccccccccctggggataca
aaaatcACAAAAGCTTGGGGCTTACCGTCGGCCTCATTcgatcaggatct
agacaaatcggGAActgattcatgatatgcaccattgcaatgtcttccga
cattacatcatg

Coding sequence (CDS) from alignment at sc0000111_pilon:652373..655134+

>MSTRG.13757.10.p1 ID=MSTRG.13757.10.p1|Name=MSTRG.13757.10.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2496bp|location=Sequence derived from alignment at sc0000111_pilon:652373..655134+ (Clytia hemisphaerica_ch_hm2_pilon)
GGTTACACTTGTTCAAAATGGGAAAATGATACCTTTTGCTACCCACCCCA
TATTGGCAGTAACGTTGGAGTGACAATTTCTGACAGGACTTGCGACGCCG
TGGTTCCTCCATTCAAAGATACTGTACAAATTCAAACAACACCCTGCAAT
TCGACTTACGAATGGAAGTCATGGTCTGATTGGTCGAAATGTGAACCAAT
CAACGCGACGGAATCCTTGTATGGTGACGGGACACGATATCGAACAGCTG
TAGATTGCCAGGATGAAAACGGTGAAAAAGTTGATGATTACTGGTGCGGT
GAAAATGCCACAATCTATCATTTGAATTCGTGTTATGTTTTCAATGAGAC
GGAATATCAATACAGTGATTACTTCTGGTCGGAGATGTCAGAATGtgaaa
tttacagaccagaattacAAGGAGTTCCAGAAACCAATGAACAGTGTGGA
AATGGATTTCAATATTCCAATCAAACATATTGTACTATGGGTGAATACCA
GGAGCATCCACCACAGAACGAAAGTCTTTGTCCACCTGCTGGTTACATTG
TGAAAGCGTGTTACGTACCTTGCAAAGGAGgAAATTTATGTCATggtgga
gaacatctgtaccaaatttcatgaGGTTACACTTGTTCAAAATGGGAAAA
TGATACCTTTTGCTACCCACCCCATATTGGCAGTAACGTTGGAGTGACAA
TTTCTGACAGGACTTGCGACGCCGTGGTTCCTCCATTCAAAGATACTGTA
CAAATTCAAACAACACCCTGCAATTCGACTTACGAATGGAAGTCATGGTC
TGATTGGTCGAAATGTGAACCAATCAACGCGACGGAATCCTTGTATGGTG
ACGGGACACGATATCGAACAGCTGTAGATTGCCAGGATGAAAACGGTGAA
AAAGTTGATGATTACTGGTGCGGTGAAAATGCCACAATCTATCATTTGAA
TTCGTGTTATGTTTTCAATGAGACGGAATATCAATACAGTGATTACTTCT
GGTCGGAGATGTCAGAATGtgaaatttacagaccagaattacAAGGAGTT
CCAGAAACCAATGAACAGTGTGGAAATGGATTTCAATATTCCAATCAAAC
ATATTGTACTATGGGTGAATACCAGGAGCATCCACCACAGAACGAAAGTC
TTTGTCCACCTGCTGGTTACATTGTGAAAGCGTGTTACGTACCTTGCAAA
GGAGgAAATTTATGTCATggtggagaacatctgtaccaaatttcatgaGG
TTACACTTGTTCAAAATGGGAAAATGATACCTTTTGCTACCCACCCCATA
TTGGCAGTAACGTTGGAGTGACAATTTCTGACAGGACTTGCGACGCCGTG
GTTCCTCCATTCAAAGATACTGTACAAATTCAAACAACACCCTGCAATTC
GACTTACGAATGGAAGTCATGGTCTGATTGGTCGAAATGTGAACCAATCA
ACGCGACGGAATCCTTGTATGGTGACGGGACACGATATCGAACAGCTGTA
GATTGCCAGGATGAAAACGGTGAAAAAGTTGATGATTACTGGTGCGGTGA
AAATGCCACAATCTATCATTTGAATTCGTGTTATGTTTTCAATGAGACGG
AATATCAATACAGTGATTACTTCTGGTCGGAGATGTCAGAATGtgaaatt
tacagaccagaattacAAGGAGTTCCAGAAACCAATGAACAGTGTGGAAA
TGGATTTCAATATTCCAATCAAACATATTGTACTATGGGTGAATACCAGG
AGCATCCACCACAGAACGAAAGTCTTTGTCCACCTGCTGGTTACATTGTG
AAAGCGTGTTACGTACCTTGCAAAGGAGgAAATTTATGTCATggtggaga
acatctgtaccaaatttcatgaGGTTACACTTGTTCAAAATGGGAAAATG
ATACCTTTTGCTACCCACCCCATATTGGCAGTAACGTTGGAGTGACAATT
TCTGACAGGACTTGCGACGCCGTGGTTCCTCCATTCAAAGATACTGTACA
AATTCAAACAACACCCTGCAATTCGACTTACGAATGGAAGTCATGGTCTG
ATTGGTCGAAATGTGAACCAATCAACGCGACGGAATCCTTGTATGGTGAC
GGGACACGATATCGAACAGCTGTAGATTGCCAGGATGAAAACGGTGAAAA
AGTTGATGATTACTGGTGCGGTGAAAATGCCACAATCTATCATTTGAATT
CGTGTTATGTTTTCAATGAGACGGAATATCAATACAGTGATTACTTCTGG
TCGGAGATGTCAGAATGtgaaatttacagaccagaattacAAGGAGTTCC
AGAAACCAATGAACAGTGTGGAAATGGATTTCAATATTCCAATCAAACAT
ATTGTACTATGGGTGAATACCAGGAGCATCCACCACAGAACGAAAGTCTT
TGTCCACCTGCTGGTTACATTGTGAAAGCGTGTTACGTACCTTGCAAAGG
AGgAAATTTATGTCATggtggagaacatctgtaccaaatttcatga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13757MSTRG.13757Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13757.10.p1MSTRG.13757.10.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13757.10.p1.exon1MSTRG.13757.10.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13757.10.p1.exon2MSTRG.13757.10.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13757.10.p1.exon3MSTRG.13757.10.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13757.10.p1.exon4MSTRG.13757.10.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000111_pilongenomesc0000111_pilon:652373..655134 +