|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:588783..592793+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13756.2.p1 ID=MSTRG.13756.2.p1|Name=MSTRG.13756.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4011bp|location=Sequence derived from alignment at sc0000111_pilon:588783..592793+ (Clytia hemisphaerica_ch_hm2_pilon)
atttgatttatatagcaaattattgcttgggatagaagttaaaggtacgt
gcacacaatgtagcaaaactgcttcgctcataaatttgcttcgcaaaaaa
attgtgagtctTCGATCACTTTCTTAATAACCCCTCGAAGACTCTATAAC
CGTTccagtactttgattgttattgattactttcgataacttcGACAACC
AATTGATTACTTCAATAATCAGTTTGGTAAGCCAAACTTgagataaaaaa
agttttattgctgacgtcagcattttttagtgGTGTGTGTACACTCCAAT
ATGcaatgtatgaagtgatatgattagacaagtggaaacggtgataaaaa
actTATTGTATAATTTACAAGTTgttagcaaaataagagacactcttaAA
AAATCCCTAAAGTGACAGGGTCCCAAGCAAGCCTTAATCCCCAAAACAAT
CGGTGGCACAACACTGCTGCCTCTCACAGTGCTCTTCTTTTTCCTTCTAG
TTCTTCtaatgtaaatggtgccttaaataatgaaaaaatatcctttaaag
ggacataacagtacttgcgaaatttgtaaacaaactgtatgcagcggata
caaaatcaaaacaaatgtcacatgtcaaaatagaaatcaaaccaaatatg
gctaattttgattggtcaattgttttacaagtttgttttggacacgtgat
tttaatattgttctctttaatgacacgtggttcgcgcaatgtttacattt
tactacttttatgtccctttaaaaactttagacaatttttatttgaattg
atTGTCATGTTCTCCCAAACAACTGATGTACAAGGGTTGCACAGCGATCG
AGACTCCACCCTGTTTCGCAATTTGCAAGCAAAATAAAGGTGTGAGACGG
GGATTGATATTTGCATAAAAAACACCCCCAAAACCTCAGAGACACAGCAC
AAGAAAGGAGATTAATTTGGAAGTGTTTACTGTGGAAAGGTTgtgtgaat
tttttgatgtcagtgttgattttgttggttgatggcttgttgaatctggc
aagaaaaaagtaaacagctTTTTCTATAACCAAGGATTTGAAGGATTTGA
GCCACTCtctcaataattataagaataaattaacttacagggctgcaaat
aagcgtcggtcatcggtcaatgtccgactgaaaaagctatttgaccgact
gaaaatcttttgtgtcggtcatgatgtccgaatgaaaaaaggaataaacc
attaacttgagagttgaaaataaatctcttacacccctgtctcttactta
gcctattcttttaatactcgcttcctttgtagctttcagggtgtttctaa
gatcacttttatcaattcgctttcttcgtaactttcattcaagggtgttt
caaagttaaacttttatcgactcgctttcttcataactttcaagaatttt
tttaagaccattttcatcaacttgcttacttcataactttcaagagtgtt
tctaagctaacttttatcgacttgctttcttcgtagctttcaagagtgtt
tctaagatcacttttatcaattcgctttcttcataactttcaagagtgtt
tctaagctaacttttatcgacttgctttcttcgtaactttcaagagtgtt
tctaagatcacttttatcaattcgctttcttcataactttcaagagtgtt
tctaagatcacttttatcaattcgctttcttcataactttcaagagcgtt
tctaagttaacttttatcaactcgctttcttcttaactattaagagtgtt
tctaagttaacttttatcaacttgctttcttcgtaacttccaaaggtgtt
ttcttaacttttatcaacttgctttcttcgtaactattaagagtgtttct
aagttaacttttatcaactcgctttcttcttaactattaagagtgtttct
aagatcacttttatcaactcgctttcttcttaactattaagagtgtttct
aagatcacttttatcaactcgcctTCTTCGTTActattaagagtgtttct
aagatcacttttatcaactcgctttcttcgttactattaagagtgtttct
aagttaacttttatcaacttgctttcttcgtaacttccaaaggtgtttct
aagatcacttttatcgaatcaatttctctgttatatacagtaacaaactg
ttgaaaggtaactttaatttttcctactcgctttctccgtaactttaaaa
aaaatatacactgaatgaccgacaggattttgagtttgaccgacaggatt
tcatttctgtcggacatgatgtccgattgactaaaaatatttatttgcag
ccctgatAGTATAGTagactttgagtgcttcattgaagatgaagaagtag
aaagataaaaaatgtactggttaattttgtttttaaatagatTTGTTCTA
CTGTTATTGAAGctacaaaagaaaattctaaCATTGCAGAttttttttGC
AGACAGTCAAAGAGGCCCCCaagtcacctttcaaatcacgcaatcacgca
aaagaaatttccaaatcacgtcataacgagttaaatttcctttctattAC
AATCACTTTGGTTTCTCCAATCATGCAATCACGcacttttaaaatcttaa
atcacaaAATCACGCACTTAAGAAAcaccaatcacgccatcacaaaAACC
CTGGGGGCCTCATTAAAGGAACAGtatgcttatacttactatgtttgcta
tacTGTGCTATATTGTCTAggtaaaaagatgtaaaaaaaagacgcaaata
tttttttatgaatgctGATATATGGCAATAATCAGTCAAAACCTACATCA
TACCTACATGACATATTATACAACCTGACTGCTGAAACAAGAATTAAATT
GTATTTAATTCTTTCTTCTAGGCTTAATTTATTCAAATGGAAGCAGCAAC
ACAGATGTTAAAGCGAGCTGTTGAGCTTGACACATCTAAAAAATATTCAG
AATCAAAAATTTGTTATGAAGAAGGTATAGAAATGTTGTTAAAAACCTTA
ACAAAAATGACCGATGAAAATGCTAAAAAGGTCATACGACAGAAGATTGA
TGGGTACATGAAAAGAgctgaagaactgaaaaaatttgtcaagaagttaa
agaaagatgggaaatttcatgagaaaattgaaattgaaaataatcaaaga
gGCTGTAGTTATGGAAGCCTTTTTTCTAAATTCATTGATGATAATTTGAC
TGTTGTTGAGATTAAAGATGCTTACATTAGAAGTCATCATCAGATATTGA
ATTTATTGAGATTTTGCGAGCTGTTGTTACGAAAAGCCAAGAACTTGAAT
GCCATCAACATTACAACAGGTAGGGTAATAAAAATTCTCATTGTTTACTT
ATGGGTCAGAATCTGACAGCTGttgttttcttgacaaaatgCAAAGTGAA
AACTAAAAGTGCATAGGAAAGGCCtttttttGTTCAGCAGACAAAGTACA
ACATTTTCTTGCAATTTCTCTTCTAGGCAGTGATGAGAATCAACCAGAGG
AACaagctcaaaaattaaaaaatttaacaacAAGTTTAGATTCATACAGG
GTGACATTATCTATAAAATATGAAGACACTCTACATGATCGTGAAATATT
ATTTGATAATGGTTGGATTATCAAGATAGGTAGAGGATTGGATTATTTTA
AAAGGCCAAACGGTCCTTTCTCAATAGGATTTTGTGATATGGATTTAAGA
CAATGTCATAAAACAACCATTGACATATATGATGCACGATaacattattt
tcttatattttttgtattcaaagtcactctatttattttttaactatttt
ttcaacttatctaatgctatgctattttaagaatttgtttgtttcattat
ttatttttcaacttacttgtatttcaaaaacattatactatatttttttc
tttttataatatttgTTTCATTCTTTCATATTTACAGTGAAAATAAATTA
ACACCATGCAT Coding sequence (CDS) from alignment at sc0000111_pilon:588783..592793+ >MSTRG.13756.2.p1 ID=MSTRG.13756.2.p1|Name=MSTRG.13756.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1398bp|location=Sequence derived from alignment at sc0000111_pilon:588783..592793+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGCAGCAACACAGATGTTAAAGCGAGCTGTTGAGCTTGACACATC
TAAAAAATATTCAGAATCAAAAATTTGTTATGAAGAAGGTATAGAAATGT
TGTTAAAAACCTTAACAAAAATGACCGATGAAAATGCTAAAAAGGTCATA
CGACAGAAGATTGATGGGTACATGAAAAGAgctgaagaactgaaaaaatt
tgtcaagaagttaaagaaagatgggaaatttcatgagaaaattgaaattg
aaaataatcaaagagGCTGTAGTTATGGAAGCCTTTTTTCTAAATTCATT
GATGATAATTTGACTGTTGTTGAGATTAAAGATGCTTACATTAGAAGTCA
TCATCAGATATTGAATTTATTGAGATTTTGCGAGCTGTTGTTACGAAAAG
CCAAGAACTTGAATGCCATCAACATTACAACAGGCAGTGATGAGAATCAA
CCAGAGGAACaagctcaaaaattaaaaaatttaacaacAAGTTTAGATTC
ATACAGGGTGACATTATCTATAAAATATGAAGACACTCTACATGATCGTG
AAATATTATTTGATAATGGTTGGATTATCAAGATAGGTAGAGGATTGGAT
TATTTTAAAAGGCCAAACGGTCCTTTCTCAATAGGATTTTGTGATATGGA
TTTAAGACAATGTCATAAAACAACCATTGACATATATGATGCACGATaaA
TGGAAGCAGCAACACAGATGTTAAAGCGAGCTGTTGAGCTTGACACATCT
AAAAAATATTCAGAATCAAAAATTTGTTATGAAGAAGGTATAGAAATGTT
GTTAAAAACCTTAACAAAAATGACCGATGAAAATGCTAAAAAGGTCATAC
GACAGAAGATTGATGGGTACATGAAAAGAgctgaagaactgaaaaaattt
gtcaagaagttaaagaaagatgggaaatttcatgagaaaattgaaattga
aaataatcaaagagGCTGTAGTTATGGAAGCCTTTTTTCTAAATTCATTG
ATGATAATTTGACTGTTGTTGAGATTAAAGATGCTTACATTAGAAGTCAT
CATCAGATATTGAATTTATTGAGATTTTGCGAGCTGTTGTTACGAAAAGC
CAAGAACTTGAATGCCATCAACATTACAACAGGCAGTGATGAGAATCAAC
CAGAGGAACaagctcaaaaattaaaaaatttaacaacAAGTTTAGATTCA
TACAGGGTGACATTATCTATAAAATATGAAGACACTCTACATGATCGTGA
AATATTATTTGATAATGGTTGGATTATCAAGATAGGTAGAGGATTGGATT
ATTTTAAAAGGCCAAACGGTCCTTTCTCAATAGGATTTTGTGATATGGAT
TTAAGACAATGTCATAAAACAACCATTGACATATATGATGCACGATaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000111_pilon | genome | sc0000111_pilon:588783..592793 + |
|
