MSTRG.13754.20.p1 (mRNA) -

Overview
NameMSTRG.13754.20.p1
Unique NameMSTRG.13754.20.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000111_pilon:516744..517756-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13754.20.p1 ID=MSTRG.13754.20.p1|Name=MSTRG.13754.20.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1013bp|location=Sequence derived from alignment at sc0000111_pilon:516744..517756- (Clytia hemisphaerica_ch_hm2_pilon)
AGACAAGAATCGATAAAGCTCTTCGTCTGACTCAGAGCCAAATGTTTTCG ATCGCAAACGGAGGCAGACCTGGTGTGAGCAAGATTGTGATTGTGTTAAC AGACGGCTCACAAACACAAGACGTTGGTGCTGAAGATCCAGGAAATGTTG CCGAAGAACTTCGATCAATGGGATATAAAGTGTTGGCTGTTGGTATTGGA AGTGGCGTCAACAGTACAGAGTTGGCTCATATTACTGGCAACAAAGCAAA TGTGTATTCTGCAGTGACTTTTGACGAGCTTATCAGTCAAGACTTTTTGG GCACAGTCAACAAAGCTGGTTGTGACGAAGGTAAGAAAAATTCATCATAT CGAAGAGTTTTCACTGTTCTGTTCTGTGTCTTTTGATTTTATGGAGAAAC TTTGTTTGATTTGAAAAAGAAGAAAGATAGTGTGTTTCACAACTCACTAA TTGAACTAACTTTAAGATGGATCTTTAAAGGTTGATCTTGAAGATTGACA CGTCCGGAAAGCTTTTGACAATCGAATAGTTGTATGTTCTTTTTTTGTTT GTGTTTTAGCCAAGAAGGAAGTAAAACCATTATGCGAAGTGAAAGTGGAT GTTGGATTCGTACTTGACTCATCGGGCAGTTTGAGAAACGATTACGACAA AGAAAAGAACTTTTTGAAGGCTTTGGCAGCTACTTTTGGTGTCAGCGAAG ATGGTGCAAGAGCAGGTGTGGTGACATTCAGTTATGACACGGAGCACAGC ATCAAACTGAATGACCATTACGATTTGTTCAGCTTCAGCGATGCTGTTGA CAAGATCCCGCTAATGGGACACACGACAAGAATCGATAAAGCTCTTCGTC TGACTCAGAGCCAAATGTTTTCGATCGCAAACGGAGGCAGACCTGGTGTG AGCAAGATTGTGATTGTGTTAACAGACGGCTCACAAACACAAGACGTTGG TGCTGAAGATCCAGGAAATGTTGCCGAAGAACTTCGATCAATGGGATATA AAGTGTTGGCTGT

Coding sequence (CDS) from alignment at sc0000111_pilon:516744..517756-

>MSTRG.13754.20.p1 ID=MSTRG.13754.20.p1|Name=MSTRG.13754.20.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1560bp|location=Sequence derived from alignment at sc0000111_pilon:516744..517756- (Clytia hemisphaerica_ch_hm2_pilon)
CCAAGAAGGAAGTAAAACCATTATGCGAAGTGAAAGTGGATGTTGGATTC
GTACTTGACTCATCGGGCAGTTTGAGAAACGATTACGACAAAGAAAAGAA
CTTTTTGAAGGCTTTGGCAGCTACTTTTGGTGTCAGCGAAGATGGTGCAA
GAGCAGGTGTGGTGACATTCAGTTATGACACGGAGCACAGCATCAAACTG
AATGACCATTACGATTTGTTCAGCTTCAGCGATGCTGTTGACAAGATCCC
GCTAATGGGACACACGACAAGAATCGATAAAGCTCTTCGTCTGACTCAGA
GCCAAATGTTTTCGATCGCAAACGGAGGCAGACCTGGTGTGAGCAAGATT
GTGATTGTGTTAACAGACGGCTCACAAACACAAGACGTTGGTGCTGAAGA
TCCAGGAAATGTTGCCGAAGAACTTCGATCAATGGGATATAAAGTGTTGG
CTACAAGAATCGATAAAGCTCTTCGTCTGACTCAGAGCCAAATGTTTTCG
ATCGCAAACGGAGGCAGACCTGGTGTGAGCAAGATTGTGATTGTGTTAAC
AGACGGCTCACAAACACAAGACGTTGGTGCTGAAGATCCAGGAAATGTTG
CCGAAGAACTTCGATCAATGGGATATAAAGTGTTGGCTGTTGGTATTGGA
AGTGGCGTCAACAGTACAGAGTTGGCTCATATTACTGGCAACAAAGCAAA
TGTGTATTCTGCAGTGACTTTTGACGAGCTTATCAGTCAAGACTTTTTGG
GCACAGTCAACAAAGCTGGTTGTGACGAAGCCAAGAAGGAAGTAAAACCA
TTATGCGAAGTGAAAGTGGATGTTGGATTCGTACTTGACTCATCGGGCAG
TTTGAGAAACGATTACGACAAAGAAAAGAACTTTTTGAAGGCTTTGGCAG
CTACTTTTGGTGTCAGCGAAGATGGTGCAAGAGCAGGTGTGGTGACATTC
AGTTATGACACGGAGCACAGCATCAAACTGAATGACCATTACGATTTGTT
CAGCTTCAGCGATGCTGTTGACAAGATCCCGCTAATGGGACACACGACAA
GAATCGATAAAGCTCTTCGTCTGACTCAGAGCCAAATGTTTTCGATCGCA
AACGGAGGCAGACCTGGTGTGAGCAAGATTGTGATTGTGTTAACAGACGG
CTCACAAACACAAGACGTTGGTGCTGAAGATCCAGGAAATGTTGCCGAAG
AACTTCGATCAATGGGATATAAAGTGTTGGCTACAAGAATCGATAAAGCT
CTTCGTCTGACTCAGAGCCAAATGTTTTCGATCGCAAACGGAGGCAGACC
TGGTGTGAGCAAGATTGTGATTGTGTTAACAGACGGCTCACAAACACAAG
ACGTTGGTGCTGAAGATCCAGGAAATGTTGCCGAAGAACTTCGATCAATG
GGATATAAAGTGTTGGCTGTTGGTATTGGAAGTGGCGTCAACAGTACAGA
GTTGGCTCATATTACTGGCAACAAAGCAAATGTGTATTCTGCAGTGACTT
TTGACGAGCTTATCAGTCAAGACTTTTTGGGCACAGTCAACAAAGCTGGT
TGTGACGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13754MSTRG.13754Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13754.20.p1.exon2MSTRG.13754.20.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13754.20.p1.exon1MSTRG.13754.20.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13754.20.p1MSTRG.13754.20.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000111_pilongenomesc0000111_pilon:516744..517756 -