MSTRG.13751.3.p1 (mRNA) -

Overview
NameMSTRG.13751.3.p1
Unique NameMSTRG.13751.3.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000111_pilon:395704..398248-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13751.3.p1 ID=MSTRG.13751.3.p1|Name=MSTRG.13751.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2545bp|location=Sequence derived from alignment at sc0000111_pilon:395704..398248- (Clytia hemisphaerica_ch_hm2_pilon)
TTGCAATTTTATTTTTCCAATCTTCTGTTACATTTTATATGTATTTTATA
TTAGGTTGATCAAAATTTAACTTAACACGATTTTATGTTTTTCCATTTCA
TTATGGATATTCTTAAATTTCTGGGGAAAATCATCCTATACAGTGAAGTA
TTTTTCCAGTATTCTTATGTAAGTGTGATTTTGTGATTTTGAATGCAATA
CCTACCTGAAGCATAACGGGAACAGTTGGTAATTTACAGTTAAGATTGCT
CTAGTTTCTGTTGCCAAATTCAATGATGGAGATATTCTCAGCATATTCTT
ATCTTTTTGATTAATTTTATTATGAATTATTCTCGTGAAGTATATTCTTT
AAAAAAACATTTAGTGGGTTTACTTTTGTGAATTACAACGAAAACTTTCT
CGCACATTTCCTCATTTTCATAAAAAATGAAAGTTCTGCATTCGCGGATC
TTTAAAACTGTCAAATTTGTCAGGATCTCCAGAACTTTTAAATTTTTTTA
TCAAATTTACGGACGTCACTTTTCGGCCGAAAAACTGAAATCCTTAAAAA
ATGCTGACGTCATGATTTAAAAAATCTTTTTTCCATATCTTTTTGGTGAT
TCTATCAAAAGTTATTGAAATTTCAATTTTCATGACGTCATCAAAATAGC
GCAAATTTGAGGATTTTTGCGAAATACGCAAAATTCATAAATCAAAAAAC
ATCTGCCTAGGCTGAATCTTATCTTACTTTAGTTATACGCATTGCTTGAG
CCCAAAATGATTTGTAACGTTGCAAGAGTTTTGACCTCCAGGAACCCGTC
TCATTCCCCTGGAGATAATTTTTGCTGTTCTATTATCAGGTATTTACATG
CATTGCACTAGTACAATTTGTAAGGCTGATTCAAAACATCCTGTCTGTGA
ATTTGGTTGTGAACCTGCGCAAACAGATCGAAAGAATCGACGTAGATTGG
ACCACAAGGAAAAAGCACCGAATGAAATTTATACAGTCACCAGTGGGTTT
ATTGAATTCAACCATGGAGATGATAATTTTCTCAATAGCGTCGAATTAGC
AGGTAATGCGACTTTCTTGTTCTCCTTGATATCTTGATTCTATTAATTTC
AAATTCCTCGATTTAATAGAACTTTAAATAGATTTTAAGAGTCCACGCAA
AATCTTCTCTAGGAGACTATTCTTAAAAGTCGAACCCCATGAATTGTAAG
ACCTTACCCCTTATTTCTTAGAAACTCATCTTTCTATCTTTATTTGACTT
TTTAAGAGATTTCTGTGGATTTTTCATGAATTCCTCTCCCCGGGCAGCAT
TCTAAACACGATGTAAAATCAATAAGGTAAGCCTCAGGCTAGAGTCGAAC
CTCCTCTGTAGGATTTAAAGCCACTTCTTACATAATTTGCATGGCTAGCA
TGGTCTTCATACAAAGACTGTATGGAAAGCAAAATTTACCGTGAGAATTT
AAAAAATGTAAAACGCGCAAACAAAGAAAGTGCTAAACTCAGTCAGTCAT
CTGAGCTGCGGCGCAAACTTTTTAGGCCTCACTTTTTCTTACTTCATCAG
AAAGGTTGAAGATTCACCTCTAGCCTTCTGCTTGGTGCTCAATGGGTAAA
ATTCTCTGCTGGAAAGACTCAATGTAAAGAATCTAATGCATGCTGTTCTA
GGACCCTCTTCCCCTAGCGTAAGAATGCAATTGAAATAACCTGAAACTAA
AGCCACTACAATGCAATTCTTGACACTCATGACGTAATGTTTTTTACGGA
AACACAGGAAAATCACCGGGCATTTGCCACCAGTTTCATTGTTTAAAATT
CAAAATGGGTGGCAAACGCCCGGTCTTTTTCGGGTGTTTTCGTATAAAAG
ATTACGTCTTGAATATCAAGAACACATACCAAATACCAAACACCTCTAAA
ACACGTCTCTTTTCAGGTACACATCACAACACAAAATACAATACACAACA
ACAACACAACTCATTCACTTCAAGTACAGAATTTCTTTCCATCTTAGCTG
TTCTTATCGCCGTCACTCTTATTGCCGTCGTCAGTATCATCGCTGCCGTC
TACTTTTACCGACAAAGACGTCAAAATATCAACAATACTAGTTCAAGTGA
CTTAGTGACGTATTTGTAGATTTGCTTGGAGTGCTATAAATTAAATTAGT
GTATAATGCACTTATCACTTTATCGCCACCCAGCTGGCACACAACGTTGT
TTCAACGTTTATCTAACGTTCACAACGTCCATTTAACGTTAGATTAACGT
TGAAACAACGTTGTGTGCCAGCTGGGCAAAGAGGGCTGAACTCGATTTTA
CCAATGGTGGATGGTGGATGGTGGATGGTGGATGGTACCAAATGTATGTG
AGTATAAATCGATAGACCTTTTGCAGGACGCATCATTTTAATAAAAACTC
TACTCATTAAAACAACGATAGGTATAAGAAAACATTTATTAGTACACGCG
TTGACTAATTATACTTTCTTTTATCATTGTTATGACGCTGGAATTTTTCA
TTATTCAACATCACATCGTTCTTAGGAGTCTGTTTATCTAAAGTT

Coding sequence (CDS) from alignment at sc0000111_pilon:395704..398248-

>MSTRG.13751.3.p1 ID=MSTRG.13751.3.p1|Name=MSTRG.13751.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=654bp|location=Sequence derived from alignment at sc0000111_pilon:395704..398248- (Clytia hemisphaerica_ch_hm2_pilon)
CTGTTCTTATCGCCGTCACTCTTATTGCCGTCGTCAGTATCATCGCTGCC
GTCTACTTTTACCGACAAAGACGTCAAAATATCAACAATACTAGTTCAAG
TGACTTAGTGACGTATTTGTAGATGCATTGCACTAGTACAATTTGTAAGG
CTGATTCAAAACATCCTGTCTGTGAATTTGGTTGTGAACCTGCGCAAACA
GATCGAAAGAATCGACGTAGATTGGACCACAAGGAAAAAGCACCGAATGA
AATTTATACAGTCACCAGTGGGTTTATTGAATTCAACCATGGAGATGATA
ATTTTCTCAATAGCGTCGAATTAGCAGCTGTTCTTATCGCCGTCACTCTT
ATTGCCGTCGTCAGTATCATCGCTGCCGTCTACTTTTACCGACAAAGACG
TCAAAATATCAACAATACTAGTTCAAGTGACTTAGTGACGTATTTGTAGA
TGCATTGCACTAGTACAATTTGTAAGGCTGATTCAAAACATCCTGTCTGT
GAATTTGGTTGTGAACCTGCGCAAACAGATCGAAAGAATCGACGTAGATT
GGACCACAAGGAAAAAGCACCGAATGAAATTTATACAGTCACCAGTGGGT
TTATTGAATTCAACCATGGAGATGATAATTTTCTCAATAGCGTCGAATTA
GCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13751MSTRG.13751Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13751.3.p1.exon3MSTRG.13751.3.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13751.3.p1.exon2MSTRG.13751.3.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13751.3.p1.exon1MSTRG.13751.3.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13751.3.p1MSTRG.13751.3.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000111_pilongenomesc0000111_pilon:395704..398248 -