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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:389388..393309- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13750.1.p1 ID=MSTRG.13750.1.p1|Name=MSTRG.13750.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3922bp|location=Sequence derived from alignment at sc0000111_pilon:389388..393309- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTTCAAATTGTCTGATTCATGATTTAAAGGATTCATTTTTTTCAGAA
ATAGTTTGATTATATTTTTGACATTATTTATATCATTTTGACATAATTTT
TGTCATTTTTTCATTCTTTTTGATTGCTATGGAATTTCTTTCGGACGGAT
TTTTTACGCGACGACACAAAGTTGAAAATGTCGAGTATTATTTGAAAGAG
AGTGTAAAGAAAATGGCGGAACGAGATGGTAAGATAAGAATTTAATTTTT
GATTTTTGATTTTTTTCATTTCGAATTTTATTTTTAAAGAAAAATCGGGT
TATATCTTTTTCTGAAGGACTTTAAGTATTAAAACTTAAATATTTGCATG
GGTCACAGGCAAGAAACAACAAAACTTTATTTATTGATAAATTTTCTCTC
TACTCTACGGTAGAGTATCTTCTGATCTAGACGCTCTACCATAGAGTAGA
GATCCAAATATTTAAGTTTTAATAATGGAAAAGCAATCACTTTCACTGAA
GAGTTTCATAACATTATGCTTTCTCATTCCAATATAAGGTAGGTACTTGA
TCAAATCCAATCGCTCTCTGCTCTACAAAATCAATTTTTACGAACAAAAG
ATTATTTCATTCATCTCTAGTAACAGGTTCAACTGCATTGGGCAAATCCA
TTTTATATACATACAGGGGATGGTAGAATATTTCCAGGGGGTCTAAAAGA
TTGATTTTAGTTCGCCCACCGTCACTTTAAGGTGTGAAAAGAAATTTTCC
ACGGGGTTATTTGAAAGAGTTATTTTATCCACACATTTAAAAGAAATATT
TTTTGACGTAAAAAGGTTCGTTCACCCCCCCCCCTGTATGGAAATTTAAT
GGAATAGCTCATTTTCCACGTTAGAAATTGTTACAGTCGACGCTCTTTCT
TTGATTCGACGTTTTACTATTCGGCATACTTCATTATTCGATAATATTGA
AAGTCACCGTCAACAAGAAACTCCCATAAACGATACTCTAACATTTCTCG
GTGAAAATCCGATTTTTCTTGTAAATCGAATCAGAGAGCGTCAACTTTAT
TAACTCTTCTTTGCTGGCATTTGGAAACCACTCTCTACGAAACTATTCTA
AATACGCCGACACGGTTTCCTCGTGGTAGTAAAAAAAGTGTGCATTTGAA
GCGAATGGAATGGTTGCTGTTAAACGCATTTCCGTACTTTTTATTTTCCA
GTGTTGATCAAGCGGCCCGCCAAAGTGGTGAGCGAGCGCAATCAGATGAC
GGAGAGCGGAATACGAGATATTTTTCAACTCTACGGTGAAGGGAGAGGAA
ATTCAGTCCAAGCTTCTCAACTGAGAGTGGTAAGCTTAAGTGTTTTGTAT
TTACACGTTTATTTTTTTTTTCATTGAAGATTGGAATCAAGTCATGAAAA
CCTGGAGTATAAAATATCATCATCTATATGCTAAATAAGTTGAATTTCAA
AAAAGCCAGTGTTCTTTCACCAAATTTTGGCTTAGATATAATTATTTGAG
ATACTAACAGTATAACTTTCCTTTGACAGTCGATGGCCTTTAGGTCTTTG
GAGGAGGGGGGTTAGGTTTTTCTGCTTGTGCAAGGTGCTTTAAAAGTTCA
TCAAAGAGAGCTATTAAAAGAATCATACCTAATTACTCTGAGAGGCCCCC
CAGCGGTAGTGATCACGATATCACACACTTTTGTGTCTTTAATCAGGATT
ACGCAAATCAGGACAAAGAATGGACAATCATGCATTCCTTTGAAAAAGTC
CAAATCACGTATAACGGCTCAAAAATCTTTCAAAAAGTTTTAATCTCTCA
TCACGTAATCACGAAGAAAAAAATTTCCAAATCACGTAATCACGAAAACC
GCTTGGGGGCATCCTCAGAGCTATTAAAAAAACTGTTTGTATCAGACTAC
CTATCTATATTTTTGTACTAAAAGATCTTACAATCCAAACTACAGTTGGT
GCTCTCTAATTCGACGTTCTACTATTCGTTAGGCTCCTTTTTCGATGAGA
TTTAAAGTTCCTGTCAGCAAGAAACTCTCATAAAGGACGCCCCCTTATTC
GATGAAAATCCAATTCCCCTTGAAGATCGAATTAGAAAGCGTCGACTGTA
TACAAAAAATTCTCACTCTACTTAGATTTTCGAGCAGATGGGTTTTCCGA
TGTCAGACGATCATTGTGAGAATTTGATCGAAACTGCTGACCAAGATGGC
GATGGAGCTTTGGATTTGAAAGAATTTGTCAACTTCGTTTTGTATGGAGT
GCTCAATGTGGAAGATACTGAGGTAAAAGTTTTACTCACCTATCAACCAC
AGTTATCTATATAAAACATTAGATATAGCTAATCTGTCTTTCCCAAGCCC
CGGTTGTAATGATAATAATATGCCATCTTTCCGAAATGTTGACACGAATA
AATAGCAGTTCAGTGCCGGTAATTGTTTCAATCAAAACAAACCTCAAGAG
AATGGTCTTGATCGACTCTCCTCACACTAAGGGTAGATAGTTTTTTTTCT
AAACTCCTTTCATTATAACAGCACTTTCTTGTTGTTATATTTGGCATTTC
TAAACTTTTCTTTGATCTATTTTTGGGACTTGGTACTATTTCTCCAAATG
TTTTATTCTGACACACTGTAGCACAGAGTTAGGGATTTCCGGTATCTAAA
AATCTTGATAAATGCTCACCAAAGTATCACCAACCTAGATTTAACAATCA
AGTGAGAATTAATTGCCCTCCCAAACCAGTCATGGTCCTTTTCAAGTTAA
TTCTCAGAAATGAGTCTGAATTTAATTGTTGTACACGTTTTTTTAAAGAA
CATTCTTTTTGAGTTTTAAGCCTAAAAATGTTCTTAACATGTTCTTATTT
TCCCCATTTTTTATGTATTTTTGTCCATTTTCCTAAGAAATTGGCTGTCC
TCAAAGCCTTAAAGTGTTCTTAACTTGTTCTTAACATTTTGACCATCGAA
GCCTTATGTTCTTATATGATTTGTTCTTATGAAAGAAAGAAACACGTGTG
CTCGTTGAAAAGATATTTGAAGCTTTATTTTTAAATCACTTTAGGATGAA
ATAATGGAATGCTTTCGTGTTTTTGATCCTGATGAAACTGGCTTCATCCC
GTCACAAGAGTTACGACGCATAATGACACAACTTGGAGATGAACTGACCG
ACAGTGAGATTAATAAAGTCATTCAACAGTCAGATATAGATGGAGATGGG
TCAATCAACTATGCTGAATATGTCAAAAAAATTTATCTTTCCAACCATCG
ATACGAGGCAGTCAATAAAAGAGATTGGGAAAATATTTTGGCCAAAATGA
GAAATGTAAGCTTGGAAAATAATACTCCTGAAGCTGAAGCTTAGAACTTT
CTCCGTTGGGAAAGTTCGCAAAATGGACCCTACACTGGGCTGATGTAATC
TTTTGAAATTTTATTGTCAAATATTTATCAATTTTTATTGTTATTCTTTT
TTATAAAAACATCCAAATTTTTTGAATTATTCGGATGTTCTTAACTGTTT
TCTTTTTAAGCCTAGAAATGTTCTTAACATGTTAAAAAAGCGTGTATTCT
TACCCCGAATCTACCTGAGCTGGGGGTAAAGTTAATCTGTTGAACGTTCA
TAGAGTCTTTTTGTTTGGTTTTCTCTTATTTAAGTCTGTTGTGTTTCCGG
CATAAAATCGTGAAATTCAATTCCGGCATAGCTATCATGAAAAGTATTGG
AAAGACTGTCAGCTGCGATTACATCCCAAGAAATTAACATCCAAAGGTCT
AAGACATCGTATTTAATTCCGATCCTTCTCACCGGCGACGAAAAAAAGTT
ACACTAAAAAGGACCCAAGTAAAAAAAGGATTTGAATGCTCAATTTATCC
CAATTTTAAAACTACTAAATTTGAATTGATCTTTTGTAATTTTTTTAATT
TTTGTAATTTTCGTTTCTTTAC Coding sequence (CDS) from alignment at sc0000111_pilon:389388..393309- >MSTRG.13750.1.p1 ID=MSTRG.13750.1.p1|Name=MSTRG.13750.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2700bp|location=Sequence derived from alignment at sc0000111_pilon:389388..393309- (Clytia hemisphaerica_ch_hm2_pilon)
GATGAAATAATGGAATGCTTTCGTGTTTTTGATCCTGATGAAACTGGCTT
CATCCCGTCACAAGAGTTACGACGCATAATGACACAACTTGGAGATGAAC
TGACCGACAGTGAGATTAATAAAGTCATTCAACAGTCAGATATAGATGGA
GATGGGTCAATCAACTATGCTGAATATGTCAAAAAAATTTATCTTTCCAA
CCATCGATACGAGGCAGTCAATAAAAGAGATTGGGAAAATATTTTGGCCA
AAATGAGAAATGTAAGCTTGGAAAATAATACTCCTGAAGCTGAAGCTTAG
ATTTTCGAGCAGATGGGTTTTCCGATGTCAGACGATCATTGTGAGAATTT
GATCGAAACTGCTGACCAAGATGGCGATGGAGCTTTGGATTTGAAAGAAT
TTGTCAACTTCGTTTTGTATGGAGTGCTCAATGTGGAAGATACTGAGTGT
TGATCAAGCGGCCCGCCAAAGTGGTGAGCGAGCGCAATCAGATGACGGAG
AGCGGAATACGAGATATTTTTCAACTCTACGGTGAAGGGAGAGGAAATTC
AGTCCAAGCTTCTCAACTGAGAGTGATGGAATTTCTTTCGGACGGATTTT
TTACGCGACGACACAAAGTTGAAAATGTCGAGTATTATTTGAAAGAGAGT
GTAAAGAAAATGGCGGAACGAGATGGATGAAATAATGGAATGCTTTCGTG
TTTTTGATCCTGATGAAACTGGCTTCATCCCGTCACAAGAGTTACGACGC
ATAATGACACAACTTGGAGATGAACTGACCGACAGTGAGATTAATAAAGT
CATTCAACAGTCAGATATAGATGGAGATGGGTCAATCAACTATGCTGAAT
ATGTCAAAAAAATTTATCTTTCCAACCATCGATACGAGGCAGTCAATAAA
AGAGATTGGGAAAATATTTTGGCCAAAATGAGAAATGTAAGCTTGGAAAA
TAATACTCCTGAAGCTGAAGCTTAGATTTTCGAGCAGATGGGTTTTCCGA
TGTCAGACGATCATTGTGAGAATTTGATCGAAACTGCTGACCAAGATGGC
GATGGAGCTTTGGATTTGAAAGAATTTGTCAACTTCGTTTTGTATGGAGT
GCTCAATGTGGAAGATACTGAGTGTTGATCAAGCGGCCCGCCAAAGTGGT
GAGCGAGCGCAATCAGATGACGGAGAGCGGAATACGAGATATTTTTCAAC
TCTACGGTGAAGGGAGAGGAAATTCAGTCCAAGCTTCTCAACTGAGAGTG
ATGGAATTTCTTTCGGACGGATTTTTTACGCGACGACACAAAGTTGAAAA
TGTCGAGTATTATTTGAAAGAGAGTGTAAAGAAAATGGCGGAACGAGATG
GATGAAATAATGGAATGCTTTCGTGTTTTTGATCCTGATGAAACTGGCTT
CATCCCGTCACAAGAGTTACGACGCATAATGACACAACTTGGAGATGAAC
TGACCGACAGTGAGATTAATAAAGTCATTCAACAGTCAGATATAGATGGA
GATGGGTCAATCAACTATGCTGAATATGTCAAAAAAATTTATCTTTCCAA
CCATCGATACGAGGCAGTCAATAAAAGAGATTGGGAAAATATTTTGGCCA
AAATGAGAAATGTAAGCTTGGAAAATAATACTCCTGAAGCTGAAGCTTAG
ATTTTCGAGCAGATGGGTTTTCCGATGTCAGACGATCATTGTGAGAATTT
GATCGAAACTGCTGACCAAGATGGCGATGGAGCTTTGGATTTGAAAGAAT
TTGTCAACTTCGTTTTGTATGGAGTGCTCAATGTGGAAGATACTGAGTGT
TGATCAAGCGGCCCGCCAAAGTGGTGAGCGAGCGCAATCAGATGACGGAG
AGCGGAATACGAGATATTTTTCAACTCTACGGTGAAGGGAGAGGAAATTC
AGTCCAAGCTTCTCAACTGAGAGTGATGGAATTTCTTTCGGACGGATTTT
TTACGCGACGACACAAAGTTGAAAATGTCGAGTATTATTTGAAAGAGAGT
GTAAAGAAAATGGCGGAACGAGATGGATGAAATAATGGAATGCTTTCGTG
TTTTTGATCCTGATGAAACTGGCTTCATCCCGTCACAAGAGTTACGACGC
ATAATGACACAACTTGGAGATGAACTGACCGACAGTGAGATTAATAAAGT
CATTCAACAGTCAGATATAGATGGAGATGGGTCAATCAACTATGCTGAAT
ATGTCAAAAAAATTTATCTTTCCAACCATCGATACGAGGCAGTCAATAAA
AGAGATTGGGAAAATATTTTGGCCAAAATGAGAAATGTAAGCTTGGAAAA
TAATACTCCTGAAGCTGAAGCTTAGATTTTCGAGCAGATGGGTTTTCCGA
TGTCAGACGATCATTGTGAGAATTTGATCGAAACTGCTGACCAAGATGGC
GATGGAGCTTTGGATTTGAAAGAATTTGTCAACTTCGTTTTGTATGGAGT
GCTCAATGTGGAAGATACTGAGTGTTGATCAAGCGGCCCGCCAAAGTGGT
GAGCGAGCGCAATCAGATGACGGAGAGCGGAATACGAGATATTTTTCAAC
TCTACGGTGAAGGGAGAGGAAATTCAGTCCAAGCTTCTCAACTGAGAGTG
ATGGAATTTCTTTCGGACGGATTTTTTACGCGACGACACAAAGTTGAAAA
TGTCGAGTATTATTTGAAAGAGAGTGTAAAGAAAATGGCGGAACGAGATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000111_pilon | genome | sc0000111_pilon:389388..393309 - |
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