|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:320163..322791- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13742.1.p1 ID=MSTRG.13742.1.p1|Name=MSTRG.13742.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2629bp|location=Sequence derived from alignment at sc0000111_pilon:320163..322791- (Clytia hemisphaerica_ch_hm2_pilon)
CCCTCAGAAAAATCACAACATCACCGCTATAATTGATCCATTGACTCATG
CTCTAATAATTCACAGTTTAAAATTGACTTCTTGATTGGTTTCTAATTAC
GATAAAAACGACATGAAACTGCTACTTTAGAAACACATATAAAGCTATCT
GACATTTGTTGACAAATAAACTTTTCTTCTATAGAAGATCAAATTATGTA
TTCGGTGAGCGTTATCAACCTCTTAACTGAAACGAAACTTACAGAGGTAT
TAGCAAAGACAGTCAAAGACGTTCAAACGAAAATATACGAATTGACTTCA
AGAGAATCTTGTATTTTATGGAAATCTGGATGCGGTGATTACGAAGCGTA
TGAAGACGATGACGATTTATTGTTCATTAGGAATCCAGAATTGAAAGAAA
CGAGAGAGATCTATTGTGTTTTATTTTCGAAAGAAGGACGTGAACACGAG
GATTGGTCATTCGAATGTTACTCGTCGCGCGTTCGAACGGCAATCCCTTT
AAAACGAATTCAATTTCGTTTACACAATATCGATGAACATCCTCTGATGA
CATATGAACCTAACCATAAACGGTCATGGCTCTACTCTTTCGTTAATCTT
CAACAAAAACTTCAACATTCAAGCGGATTACCTTCCAACAGACTATTCTT
CTACACTAAAGTTCCCGAGATTGCTATAGAAAGTACAAAATCGTGGCTTG
AAGTCTTAGCATCAGGTTCCTACACTAATGAAGGACTTAATGTTTATGTA
GGGCTATTTGCTAAAGAAGATTCGAGAAAATCGTGTCTTGTAAAAGATTC
AAGAATTAGCTCATGCAGAAAACTACCGTATGTCAGTATCCTCAACTCTG
AGAGCGAAATTATTCGATGGTTTCCAAAGAGTAACCAATGTTCTGTAATA
GAATTGAAACATTTTATTGAGCAGAATTTATCTATTCCAATAGCAAATCA
AGTTCTTTATTATCAGAATATATATTTGGATGTTACCCAATCCATAATGG
AACTTCTAATCATGTGTAATGAGGTTTCACCATTGAAGATTGAACTTACC
TATGTGTGGAAACCAAACTTGAGCATGGATGAGAAAGCTATCCAATCTAT
TAAGGAGAATTGTTTAGCGAAACTTCCTTCCATTGAACTTAGAGATAAAA
GGTATCAACTTACTATCCTAAAGGATGTTTTTGAGCATGTTAAGGACACC
GGCGAATGGCAAGATGGACTGAAACGAGTCTTAGAATCTAAATACAAATT
ACCTGCAAATTGGTTCTTTTTCCAATATCGATCTGGATTAACAATCCCTA
AACGAGCACTTCAAGCCTTAATTCGCGATGATGCCAGCTTCAAATCAGAT
TTATGTTTTGATGTTATCGCATTAAAACCCATTTTTAACGTTGCTGCAGA
TTCGATTTTAAACGAGGATGGTTATTACTTCAAACTTCTTGGTATCAAAA
ATTTGGTTCTAAAGTCACTGACTAAGACAGAGTCGTTGGACATTTCCAAA
TACAATACTATGCACTGTATTTCGAGATACTTTGAAAATGAGCTCAAAAT
ACCAAAGCATTTGCAAATTTTCATGCACAAGAAGAGAAAGATTAGTGAAA
ATGAAAGATTGTCTGATATCTTTTGGTATCATTGCAGCGTGGAGGAAAAG
GTAGAGGGAACGTTAACCATTAACTTGGTCTCAAAACCTCCTCCTGTGGT
TATAACTGTGTATTTAACTTGTCCATATGCTGCCAGAATTGGATTGCCAG
AAACGTTGGAGATGAAAGAGACTTTAACACTTGCCGAAGCTGGAACAACC
ATATCCAATCTTACTCCTTATTCCGTTTCCACAACATTACCTGAAGGACT
TTTACCAATTGGATCCCACATTTTGGCAAGGGATCAATATTTTCTTTATC
GCATTGTTAAAGACAAGGGTAGGTATCCAATCGAACTAAAAGTTACACGT
ACAATCCACATCAAATTATATCCATGCGGACATTGTGGTGTTTCTGAGGT
TTTAGAACCAACTTTTACGATTAATGACGTTACACATACTGTCCGAGATA
TGGTTAAAGGCATACGTTTTCTATATAAAACATGTTGTGAAAGAGCTGAA
TGGAGGTTAGCCAAAGATCGCCAGAAAAGAGATATTACCACAGACTCACT
TTTGATTGAACTACCACCAGATTTTGATGGAAGTCTTCGAGGGGTACGCT
CAATTAGGCGTTTTTTTAGGAAAGTTGTAAAGAATTGAAACCTTTTTTCA
TTAATAATTCTCGTTAGAGTTTAAGAAAAAAAATTATCAAAGTCCATTTG
CTTTAAAGGCTTGGGGACACGAGTAGTATTTTACGCGTTGGTGCAATGCA
ACATCATCCCACCAACACAAGAAAAAAAGTATGTGTCTCAGGGTTTCTTT
TTTGTTTCATGGGAAATACCCAAAAGACACGCTGATTTTGTCCCTGGGAC
AAAAGTGAGAGAAGCACAAATGTTATTAAAAGAAAAATGGGATGGTGACA
CGAGAAAGGGTTTCAGGTTAGTGGGATGGAGCATGTTGCATTGCACTAAC
GCGAAAAAAACTTCTCGTGTCCCCAAGCCTTAAGTTTGCATGTACTAAAT
TTTTATACACATTTGATAATACATTTTTG Coding sequence (CDS) from alignment at sc0000111_pilon:320163..322791- >MSTRG.13742.1.p1 ID=MSTRG.13742.1.p1|Name=MSTRG.13742.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2043bp|location=Sequence derived from alignment at sc0000111_pilon:320163..322791- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTCGGTGAGCGTTATCAACCTCTTAACTGAAACGAAACTTACAGA
GGTATTAGCAAAGACAGTCAAAGACGTTCAAACGAAAATATACGAATTGA
CTTCAAGAGAATCTTGTATTTTATGGAAATCTGGATGCGGTGATTACGAA
GCGTATGAAGACGATGACGATTTATTGTTCATTAGGAATCCAGAATTGAA
AGAAACGAGAGAGATCTATTGTGTTTTATTTTCGAAAGAAGGACGTGAAC
ACGAGGATTGGTCATTCGAATGTTACTCGTCGCGCGTTCGAACGGCAATC
CCTTTAAAACGAATTCAATTTCGTTTACACAATATCGATGAACATCCTCT
GATGACATATGAACCTAACCATAAACGGTCATGGCTCTACTCTTTCGTTA
ATCTTCAACAAAAACTTCAACATTCAAGCGGATTACCTTCCAACAGACTA
TTCTTCTACACTAAAGTTCCCGAGATTGCTATAGAAAGTACAAAATCGTG
GCTTGAAGTCTTAGCATCAGGTTCCTACACTAATGAAGGACTTAATGTTT
ATGTAGGGCTATTTGCTAAAGAAGATTCGAGAAAATCGTGTCTTGTAAAA
GATTCAAGAATTAGCTCATGCAGAAAACTACCGTATGTCAGTATCCTCAA
CTCTGAGAGCGAAATTATTCGATGGTTTCCAAAGAGTAACCAATGTTCTG
TAATAGAATTGAAACATTTTATTGAGCAGAATTTATCTATTCCAATAGCA
AATCAAGTTCTTTATTATCAGAATATATATTTGGATGTTACCCAATCCAT
AATGGAACTTCTAATCATGTGTAATGAGGTTTCACCATTGAAGATTGAAC
TTACCTATGTGTGGAAACCAAACTTGAGCATGGATGAGAAAGCTATCCAA
TCTATTAAGGAGAATTGTTTAGCGAAACTTCCTTCCATTGAACTTAGAGA
TAAAAGGTATCAACTTACTATCCTAAAGGATGTTTTTGAGCATGTTAAGG
ACACCGGCGAATGGCAAGATGGACTGAAACGAGTCTTAGAATCTAAATAC
AAATTACCTGCAAATTGGTTCTTTTTCCAATATCGATCTGGATTAACAAT
CCCTAAACGAGCACTTCAAGCCTTAATTCGCGATGATGCCAGCTTCAAAT
CAGATTTATGTTTTGATGTTATCGCATTAAAACCCATTTTTAACGTTGCT
GCAGATTCGATTTTAAACGAGGATGGTTATTACTTCAAACTTCTTGGTAT
CAAAAATTTGGTTCTAAAGTCACTGACTAAGACAGAGTCGTTGGACATTT
CCAAATACAATACTATGCACTGTATTTCGAGATACTTTGAAAATGAGCTC
AAAATACCAAAGCATTTGCAAATTTTCATGCACAAGAAGAGAAAGATTAG
TGAAAATGAAAGATTGTCTGATATCTTTTGGTATCATTGCAGCGTGGAGG
AAAAGGTAGAGGGAACGTTAACCATTAACTTGGTCTCAAAACCTCCTCCT
GTGGTTATAACTGTGTATTTAACTTGTCCATATGCTGCCAGAATTGGATT
GCCAGAAACGTTGGAGATGAAAGAGACTTTAACACTTGCCGAAGCTGGAA
CAACCATATCCAATCTTACTCCTTATTCCGTTTCCACAACATTACCTGAA
GGACTTTTACCAATTGGATCCCACATTTTGGCAAGGGATCAATATTTTCT
TTATCGCATTGTTAAAGACAAGGGTAGGTATCCAATCGAACTAAAAGTTA
CACGTACAATCCACATCAAATTATATCCATGCGGACATTGTGGTGTTTCT
GAGGTTTTAGAACCAACTTTTACGATTAATGACGTTACACATACTGTCCG
AGATATGGTTAAAGGCATACGTTTTCTATATAAAACATGTTGTGAAAGAG
CTGAATGGAGGTTAGCCAAAGATCGCCAGAAAAGAGATATTACCACAGAC
TCACTTTTGATTGAACTACCACCAGATTTTGATGGAAGTCTTCGAGGGGT
ACGCTCAATTAGGCGTTTTTTTAGGAAAGTTGTAAAGAATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000111_pilon | genome | sc0000111_pilon:320163..322791 - |
|
