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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:253755..261189+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13738.3.p1 ID=MSTRG.13738.3.p1|Name=MSTRG.13738.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7435bp|location=Sequence derived from alignment at sc0000111_pilon:253755..261189+ (Clytia hemisphaerica_ch_hm2_pilon) AATAATTACTAACAAATAGATGAATCAAAATGGTGACTTGAAAACTACAG
TGATGTAATGAAAGGATGAGGTTACAATGGAAAATGAAAGCGGTATGttt
ttttACCCGAAATTTGATAAATCCGTTGTATGTATGTATATTATGTCAGG
CAATAAAGTGCAAGTTTTGGATTTTTAGAAGAATATTTAAATCACACTTC
TGATCTTTTTGCCTTTTCCGGGTGTTTCAAGAATATGCgaataaaatttt
acattttcctACCAAATATAGCAAGAAACTTTTAAATACCTaaaaaaaCT
GCATTCTACTTCTTTACAGAGAGCCAAATACTATCTTGTCATCATATTGT
GCATGGTAGTTCTGTATTTGATCCATCACAATAGCTACTACACAACACCT
GATGCCTTTAAATACGATCACAAAGAGACCAAATCCAGTGCACTGACCAC
AGCAGCTGAAGACGCATCCACTGAAATTAAAAGCGTTGGAAGCAAGTATT
TTGTAGATGAAGATTATTTTGGTCTCGTTAAAACTgaagaagaagagaag
aaaagagaagaaggttacaaaaaattctcatttaatCTGTTGGTGTCCGA
TCGAATTGGGTATTATAGGAGTATACCGGACACTAGGAATAAATTGTAAG
TATGCATCCTTTGTCCATTACTCTCTGGTACCTGTggtctctttttgttt
tgaaaactttgactCAGATTGAGACTaggattcatgatatgcaccactac
aatgtcttctgacattacatcacagcCCCATCAGCTCATTGCTTGCTATT
GACGTACTGACGGATTTACGTCACATACAACCAGCTGTTTGAGTCCGTGC
AGTCCGTggtgtaatgtcagaagacattgcaatgatgcaTACCATGAATA
GCAAATCTAAAAAGGGCTTCTTTAATTGAGTATGAAAATTAGAGAGAGAA
GCACgtgttttattgatttttttactaCTGAAAACCAATGCTACCGACGA
TAATTATGCAATAAATAACGAATGACTTAAAGGATATCAAAACGACAGCT
TCTACATGTTGCTTTTCAGATGTAAACATCAATGGAAAACCCAGGGCTCA
CATTGTAGCATCATTATCACGTTTCACAACGAGGCTATTTCAACGTTGCT
TCGGACAGTGGGAAGCATTCTTCAACGTACACCACGTGACCTCGTTAAGG
AAATCTTATTGGTAGATGACTTCAGTACTGAAAGTATGATTCACACCttt
ttttAagaatcagaaaattttgactcaGGCTGGGCTAGCttaggtttttg
aaattttcagccttgattgtttttaaaatgttcttattgtaCATGACTTT
AgaatttttcattcattttgagCTTGTGAATCGAActagtatttttgaaa
taaagtgGTGAATTTACGACAGTTAGTCTTCAAAAAATGGTATAATGTTT
AATCTTTCAGCAAATATCGAAAAGATTCATTCTTTCAttcaatcaacaaa
aacaaccaCCGTAAAACTCGTCCAAGCTCACAAACGCCAAGGTCTCATAC
GAGGTCGTTTGCTAGGTGCCCGTGCAGCTGTTGGTGACATTTTGGTTTTT
CTTGACAGTCACTGTGAAGTTAATAGTCATTGGTTGGAACCACTTATTGA
AAGAATTCGAGAAAATCGTAAAAATGTTGTTTGTCCAGTTATCGATTTAA
TCGATTCACATACGTTTGTCTATTTGGCATCTCCGATAGTTAGAGGTGGC
TTTACGTGGAGTTTGGCTTTTGGCTGGGAACAAATTCCCGAAACACAAAA
AGGAAACCCGAAAAAAGACCCATTTAAGTATgtcatttcaattttaaatg
atATGAGAGTTAAAATTATATATCATAGGGATAActataaaaaaatttct
atgGATTGACCCAGAACGAAAAATGGTAAGAAAGTGATGTTGAATGAAAA
TAATTAGGAAGTAAGTATACTAATCTGGTGGCTGACAGTGGAGCCGGGAT
ATAGGGAGTCtgccttttctatttgcgctagactgGAGGTTGAATGTTGA
GGTGgggcgccacacctactctcactTCCCCGTAGCTTACCGCCCATCAT
CAGATTACCTAACCTAAGCTACTCATTTGCTGAGTGGGTGGTGACCAGCG
ATCGAACCCACAAGCCTTGGTTTGCAAAGCGAATGCTCTACCGTTTGAGC
TACCCGGCTGAAAAATATAAGCTCTAGAATTAGCAGAAGAATCACTCACA
TCTGACCAAATATGaaccaaaaatttcatttttttctcatttttaggtCA
CCAACAATGGCTGGAGGATTGTTTGCAATGGATCGCAAATACTTCTTTGA
ACTTGGTGCTTATGATGATATGATGGAGGTTTGGGGAGGAGagaatttgg
aaatttctttCAGAGTATGTTACGATAGTCGCAATAAAGTCTGCCTCGAT
ATAAtctgctcgttgaaaagatgatAAAGAGTTGGGtattattgaaaaat
atcaaaaaacattggaaagtaaaatgaaaaaatgaaaaatgaagaattgt
agaattgtaaaatgaCCGTCATTTTCATATTAGtgaatcttcaattttag
agggttattactttgaaaaaaattaggaTATATTGAAACAAACATATAAT
TGTTATAGAAAACTGACAGCAGGTGACAACAAATCCTAACCAATATACCT
CGTAAAACTGGTTTTTGTTTCGATATATTCAATTTTAACCGAAAAACGTG
CGAACTTTGATTGAAATGTCATTTGGAGAATCTCATTTGGTTACAAGAAA
TCTATTAAGTGCTCAGTTTGTAATTCTTTAAATATGATTTATCCtttaaa
aatttcaaccttAGATCTGGATGTGTGGAGGAAGACTGGAAATAGTTCCT
TGCTCACGTGTTGGTCACGTGTTTCGAAGCCAACGAATCGGTAATGCGCA
AACTGATCTTTCACACGATGGAGAAAATGCAGTACGCGTTGCTGAAGTTT
GGTTGGATGGATACAAAAAACATTTCTACGCATCACGTCCTTCATTGCGC
ACGTATAAACCAGACGTTAGCAAACGCGTGAAATTACGTAGGGATTTGGA
CTGTAAATCGTTCGACTGGTTTCTACGTGAAATTTACCCTGAGATGTCAA
TCCCTGGTGTGAGAGAAGGCCAAGCTTGGAATGTTTTGGGCGACTCTAAG
AAAAACGCTGACAATATCACTTCGGTTGTATCGGTATGTTTAATCATCGC
ATGTTCAATCATTACCCCAGCTCAATTGTTAAATTCTGTCCTAGGAAATT
TATCTCTTTAAAGTCAAACAGTTTCTTACTGGGGAGAGGTGTAGTCTAAT
TTGTCTTGTCCAGTGGTATCGAACATCCACCGGGAAATTTAATTTAAagg
gtaattttttttgcttccaaaggaatcaattttttacatttggcttataa
atcaaaacttctcgtaaaaaagattgaaaaaaatactttaatttcagaaa
tttgTATTTGGTGGGATTTTAATTTTGCGTATTATGAGAATAGAATTTAC
TTATAAGTACTTATGGtttttttttcgcgggaatttaattttgcagctca
gcaatatagattttttttcaaccattttatctagcaaattttagcaaatT
CATAAAAATCACGGGAAAATCTTGGCCGCGAAAATTTCTGACATCAAAGT
ATAATGATATGCACCAACCAGCctccgaaatttttttttatgatgacAGA
CGAGGCTCCTTATGATTTTTAGATTGTAAATCCAAACAGTTTTCTATGTA
TGGCGGTCAAAGGGGCCAACGAGCCAAGATCGAAGTCAAGAATTGTTCTT
GGGAAGTGTCACCTATCCAAATACAAGGTAACGAGTCTGCATACACTTTT
AATACGTCAAATACTTTTCGCATCAAGACGTCtttttttAAGCTGGCGAA
TCTCACAAGGAAAATGGAGgaaaaaaatcgatgaaaatgaccaagaaTTG
CCGCTTAAAAATCAGGTTTGCACCCCAGAAAAATGCTTTATTAGAGAAGG
AACAACACCAAAAGACACTCTGAACTGTAGGAAGTGCCACCGAGATGTTC
ATTATGATTGTTCCGAGCTACCAATCTACCAAATACAGATTTGCTTAACG
TTTAAATCTCGAAGTTTTCAATGCCAAAGTTGCGTTAAGATCTCGCCAGA
GCTGACTGAACTAGTTGAAACATGCAGAAACACCAAAATCGAAGgacttc
aaaaggaaattaaagcaTGTGAAAACAAAATGAAGAGATTTCCCAACTGA
AATCAAATGATGAACTTTCTTACAAAAGGAATCAAAGAAAGCCTGGAAAT
AAAGATGAGCATACTCGAGAAAAAGATAGAAACAAAGATCGAGAACATCT
TAATCGAAGAGGCGAAAGAGGTTAGTTATCCTGAAGCTGTATCCAAACAg
atgaatcaaaaatcaaataaggtgGAGAAAATAACTCGATGTGAAACAGC
CGGCAATCAGCGATCCACAGCATGTAACCTAATTTTCCATGGAATCAGAG
AACATCTGGAGGATCCCGAGAATACAACGAAAATCTACGAAGAGAAATTT
ATCAAGTACAGAATCCTTGGTTTACAACTGGGCATCAAGgacataaaaat
tataaacacaCAGAGGATTGGAGTATTCACAGAAGAAAGAGAGGAGAAAG
GGAATTATCGACCAATCAAGGTAGTATTCGagaatgaagaagacaagaac
aaaGTCTTGAGAGCCATCACGACATACAAAGGCCCTCCTTCATCCTATCG
AGCAACAGAAGACCTCACAATTATTGAACGATTGACAATCAAAGAATTGT
GCAAGTGAGCACATGAGCTcaatgctcaaatgaaagacaaaaacattcaa
tttaaaGTCAGGGGAAGCCTCAGAACAAAACTTTacctaaagaaaattgt
aacaacAAGTGATTGTCTTAGAGGCCCACGGCGTGCCTTGAACCTCAATc
ctttaacaaataaataataaCCTGTATAAAACCTCCATGTAAAACCATTT
GTAGCGGGAGGGGCGTACGGGGTTGTTTGACTGATATCCGGAAAACCGAA
GAATTTTACCACGATTTCTGAAATTCTGCAAAAACTACCCTTTTTCGTCA
TACTGTCTAAATTTCACAAAAAGAGAAGAAATTCCGAATTACTTGAGCAA
AAACTCTTCATTTCCGAAATTCCAGAGTAAAAAAGGATCGATTTTCGATA
CtgaacaatttcagaattccgaaataccgaaaaaGAATCGTGCTATTTCC
AAAATTCCGAAGTAAAAAAGGTTGCTTTTCGATTTCCTTAGGACTGGTAT
TACACAGATGAGGAAGAAGTTCGTTTGAAGCATGGAAAGAATAGATTGTG
TTTGGATGTTGAACTGTTCTACAATGCTGGTAACAGTCAAGTACGCCTCA
TGAAGTGTCATGGAGAAAAAGCTGGCCAACAATGGAAATATCATAAAGTA
GGAAAATGTCTAGTTTCCTAGTTATTTCCGGGGTggggggggCAGTACTA
AAGTTTGAGACATCATGATGTTTTGTTACATAGTAGTCTTATTTTGGAGT
TAAATCaacatttttaggaaaattggtCCCGAAAAGACAAAAATAGGGTG
GTTAATCCCCATATATGTCTTAGAAAATGTTCATAAGTAAATCAGATTTC
TTGAATGATTTAGTCATCACTCCATTTTCCTTGTTACTTTGTCGAAACCT
TCAATATTTAATCTTGAAGAGATGAATTAATGGTGCTTTTTTGCACACGT
CTATGAAATAATCACTCCCACCACTATGATGGTTGCCATGGGAagaattt
tatgcatttttccaaggttttcagataatttatttattcatattggaagt
ttatcgtggcttgaatcacaagatttacgtttggctatgTTTCGatagat
tcttctcccatcatcgggcaatgtgAAGGATGTTTTACCCACTACTTGTA
CTAAGACCTTCTGACTACCCATCATTGTAATTTCCTTACAAGGTGTAAAT
TCCCATGATATAACATAGGTGTAAGGTAAATTATCTCTTGAATTTATGAG
ATTACTAATTATTCCATTTCGCCTCTCTGTCTGGATGTTAGGAACTCAAA
CTTACTTATTCATGACATGAAAAGCCGTTCGAAGTTCAATCAGAGTTAAA
AACAAAGCAACcgaaattttaatgaaatttttcctGCAAGTATTTGttgc
caaaaataattttctaatttgcaataaaataaaatcgtTTTGTCTTgtct
tttggatttttttcatcgcaaaagctcaaaaatttactgaaaaaaaaagg
atttcaaaaataatttaccgTTAAGGCAGGGCTGCACTTCTTCAAGGTTT
TCAGTGCACTAATAAACTTCTTTAATATCTAAAAGCCGTTGTTACCTTTA
TAGGAAGATGAACGCTTATACAATCCAGCTTATGGTATGTGTTTAAGTCA
AGATGTCGAACAATATTTTTTCGTAACCATGGCGATTTGTGACGTCAGTG
ATGAAAAACAacattggaaattgaaaaaagacgAAACAAAGCGAGTAAAA
TAatttgggcttttccagaaaaaacttgAATATAGGGTATctaggatata
acattttttggatatttacccccggacagcaggtctaacccccggacagc
aggtctaacccccggacagcaggtctaacccccggacagcatcagttgac
ccccctggacattcaaaattactctcaaacagagcaaattaccccaaaca
gagcaaattacccacaaacagagcaagtttgcccccaggacaaggcaaat
tttgttagaattttcactacccccggacactatatcctccaccccacatg
tacaaacattttttggaagagcCCTCTGCCTAGTTTGCTCATATTTATAT
CTTTTACAGAAACTGAATTGTAATACTCCCAACCTATTTCAAATCTGAAT
AATTTCTCGCATATATCTTACCTTCTGAAATTTCTTAGatttatatctca
atttttGCAGACCTTTTTCGTTTTAGAGACTGCAACCTCTATAGTCAAAT
AGTAATAGAATCTCGTGATTATCTTTCCAATGTTATATCCTTATAACTTA
GAGTGTTGAGAAAAATCTTTCACCCTTactttgaattttatattttgtaa
ttatttataaattttttattttatttttaggtattaaattttCAGGAAAA
CCATGAGCTTAAATCTAGGTGTTGGctatattttatttatgttgATTATA
TTGTAACAGTCAAAGTTATCCCAAAGCTCTCCCAATAGTTTATTTATTGA
CAGAGTAGAAGTAAAAAGGCTTAGCAGCCTAAGAGCAAAACATTCGTTAC
TGAATTTTTATCGATTTCTTAGGGATATTTAACTC Coding sequence (CDS) from alignment at sc0000111_pilon:253755..261189+ >MSTRG.13738.3.p1 ID=MSTRG.13738.3.p1|Name=MSTRG.13738.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3864bp|location=Sequence derived from alignment at sc0000111_pilon:253755..261189+ (Clytia hemisphaerica_ch_hm2_pilon) ATGAGGTTACAATGGAAAATGAAAGCGAGAGCCAAATACTATCTTGTCAT CATATTGTGCATGGTAGTTCTGTATTTGATCCATCACAATAGCTACTACA CAACACCTGATGCCTTTAAATACGATCACAAAGAGACCAAATCCAGTGCA CTGACCACAGCAGCTGAAGACGCATCCACTGAAATTAAAAGCGTTGGAAG CAAGTATTTTGTAGATGAAGATTATTTTGGTCTCGTTAAAACTgaagaag aagagaagaaaagagaagaaggttacaaaaaattctcatttaatCTGTTG GTGTCCGATCGAATTGGGTATTATAGGAGTATACCGGACACTAGGAATAA ATTATGTAAACATCAATGGAAAACCCAGGGCTCACATTGTAGCATCATTA TCACGTTTCACAACGAGGCTATTTCAACGTTGCTTCGGACAGTGGGAAGC ATTCTTCAACGTACACCACGTGACCTCGTTAAGGAAATCTTATTGGTAGA TGACTTCAGTACTGAAACAAATATCGAAAAGATTCATTCTTTCAttcaat caacaaaaacaaccaCCGTAAAACTCGTCCAAGCTCACAAACGCCAAGGT CTCATACGAGGTCGTTTGCTAGGTGCCCGTGCAGCTGTTGGTGACATTTT GGTTTTTCTTGACAGTCACTGTGAAGTTAATAGTCATTGGTTGGAACCAC TTATTGAAAGAATTCGAGAAAATCGTAAAAATGTTGTTTGTCCAGTTATC GATTTAATCGATTCACATACGTTTGTCTATTTGGCATCTCCGATAGTTAG AGGTGGCTTTACGTGGAGTTTGGCTTTTGGCTGGGAACAAATTCCCGAAA CACAAAAAGGAAACCCGAAAAAAGACCCATTTAAGTATgtcatttcaatt ttaaatgatATGAGAGTTAAAATTATATATCATAGGGATAActataaaaa aatttctatgGATTGAATGAGGTTACAATGGAAAATGAAAGCGAGAGCCA AATACTATCTTGTCATCATATTGTGCATGGTAGTTCTGTATTTGATCCAT CACAATAGCTACTACACAACACCTGATGCCTTTAAATACGATCACAAAGA GACCAAATCCAGTGCACTGACCACAGCAGCTGAAGACGCATCCACTGAAA TTAAAAGCGTTGGAAGCAAGTATTTTGTAGATGAAGATTATTTTGGTCTC GTTAAAACTgaagaagaagagaagaaaagagaagaaggttacaaaaaatt ctcatttaatCTGTTGGTGTCCGATCGAATTGGGTATTATAGGAGTATAC CGGACACTAGGAATAAATTATGTAAACATCAATGGAAAACCCAGGGCTCA CATTGTAGCATCATTATCACGTTTCACAACGAGGCTATTTCAACGTTGCT TCGGACAGTGGGAAGCATTCTTCAACGTACACCACGTGACCTCGTTAAGG AAATCTTATTGGTAGATGACTTCAGTACTGAAACAAATATCGAAAAGATT CATTCTTTCAttcaatcaacaaaaacaaccaCCGTAAAACTCGTCCAAGC TCACAAACGCCAAGGTCTCATACGAGGTCGTTTGCTAGGTGCCCGTGCAG CTGTTGGTGACATTTTGGTTTTTCTTGACAGTCACTGTGAAGTTAATAGT CATTGGTTGGAACCACTTATTGAAAGAATTCGAGAAAATCGTAAAAATGT TGTTTGTCCAGTTATCGATTTAATCGATTCACATACGTTTGTCTATTTGG CATCTCCGATAGTTAGAGGTGGCTTTACGTGGAGTTTGGCTTTTGGCTGG GAACAAATTCCCGAAACACAAAAAGGAAACCCGAAAAAAGACCCATTTAA GTATgtcatttcaattttaaatgatATGAGAGTTAAAATTATATATCATA GGGATAActataaaaaaatttctatgGATTGAATGAGGTTACAATGGAAA ATGAAAGCGAGAGCCAAATACTATCTTGTCATCATATTGTGCATGGTAGT TCTGTATTTGATCCATCACAATAGCTACTACACAACACCTGATGCCTTTA AATACGATCACAAAGAGACCAAATCCAGTGCACTGACCACAGCAGCTGAA GACGCATCCACTGAAATTAAAAGCGTTGGAAGCAAGTATTTTGTAGATGA AGATTATTTTGGTCTCGTTAAAACTgaagaagaagagaagaaaagagaag aaggttacaaaaaattctcatttaatCTGTTGGTGTCCGATCGAATTGGG TATTATAGGAGTATACCGGACACTAGGAATAAATTATGTAAACATCAATG GAAAACCCAGGGCTCACATTGTAGCATCATTATCACGTTTCACAACGAGG CTATTTCAACGTTGCTTCGGACAGTGGGAAGCATTCTTCAACGTACACCA CGTGACCTCGTTAAGGAAATCTTATTGGTAGATGACTTCAGTACTGAAAC AAATATCGAAAAGATTCATTCTTTCAttcaatcaacaaaaacaaccaCCG TAAAACTCGTCCAAGCTCACAAACGCCAAGGTCTCATACGAGGTCGTTTG CTAGGTGCCCGTGCAGCTGTTGGTGACATTTTGGTTTTTCTTGACAGTCA CTGTGAAGTTAATAGTCATTGGTTGGAACCACTTATTGAAAGAATTCGAG AAAATCGTAAAAATGTTGTTTGTCCAGTTATCGATTTAATCGATTCACAT ACGTTTGTCTATTTGGCATCTCCGATAGTTAGAGGTGGCTTTACGTGGAG TTTGGCTTTTGGCTGGGAACAAATTCCCGAAACACAAAAAGGAAACCCGA AAAAAGACCCATTTAAGTATgtcatttcaattttaaatgatATGAGAGTT AAAATTATATATCATAGGGATAActataaaaaaatttctatgGATTGAAT GAGGTTACAATGGAAAATGAAAGCGAGAGCCAAATACTATCTTGTCATCA TATTGTGCATGGTAGTTCTGTATTTGATCCATCACAATAGCTACTACACA ACACCTGATGCCTTTAAATACGATCACAAAGAGACCAAATCCAGTGCACT GACCACAGCAGCTGAAGACGCATCCACTGAAATTAAAAGCGTTGGAAGCA AGTATTTTGTAGATGAAGATTATTTTGGTCTCGTTAAAACTgaagaagaa gagaagaaaagagaagaaggttacaaaaaattctcatttaatCTGTTGGT GTCCGATCGAATTGGGTATTATAGGAGTATACCGGACACTAGGAATAAAT TATGTAAACATCAATGGAAAACCCAGGGCTCACATTGTAGCATCATTATC ACGTTTCACAACGAGGCTATTTCAACGTTGCTTCGGACAGTGGGAAGCAT TCTTCAACGTACACCACGTGACCTCGTTAAGGAAATCTTATTGGTAGATG ACTTCAGTACTGAAACAAATATCGAAAAGATTCATTCTTTCAttcaatca acaaaaacaaccaCCGTAAAACTCGTCCAAGCTCACAAACGCCAAGGTCT CATACGAGGTCGTTTGCTAGGTGCCCGTGCAGCTGTTGGTGACATTTTGG TTTTTCTTGACAGTCACTGTGAAGTTAATAGTCATTGGTTGGAACCACTT ATTGAAAGAATTCGAGAAAATCGTAAAAATGTTGTTTGTCCAGTTATCGA TTTAATCGATTCACATACGTTTGTCTATTTGGCATCTCCGATAGTTAGAG GTGGCTTTACGTGGAGTTTGGCTTTTGGCTGGGAACAAATTCCCGAAACA CAAAAAGGAAACCCGAAAAAAGACCCATTTAAGTATgtcatttcaatttt aaatgatATGAGAGTTAAAATTATATATCATAGGGATAActataaaaaaa tttctatgGATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000111_pilon | genome | sc0000111_pilon:253755..261189 + |
|