MSTRG.13735.1.p1 (mRNA) -

Overview
NameMSTRG.13735.1.p1
Unique NameMSTRG.13735.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000111_pilon:222231..224048-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13735.1.p1 ID=MSTRG.13735.1.p1|Name=MSTRG.13735.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1818bp|location=Sequence derived from alignment at sc0000111_pilon:222231..224048- (Clytia hemisphaerica_ch_hm2_pilon)
AGATTGAATTTTCAACTCAAGATGACAGTACTATTATAACGAATCCTGGG GAATTGATCGCCTCCTCGATCACAACACCGCCTCCGACAACGACAACCGC TCTAACAACAACCCAGCCCCCACGTAAGTATCGCACTGGAAATTTCAAAA TATTTTTCTACTATGCACGTTTTCTTATAAGCATGAACACTATTGAATGG AAGAGTTCGATCCCAAAGATCTTTCGAGATGGAAATTACCTTAAGTGGAT TAATTTTGGCGTGGATTTAATTTGGCGATAGATCAATTTCGTAAAATTGG GCGGGGATTTAATTTGGCGAATTGGAAATTTTGAAACTCTGAAATGGGTG AAAATTACCATAAAATATACTAAAAAGTTGTGATTTTTTCACATATTCTC TTTGTTAAATTTTGCGGGGATTTAATTTGGCGAGTGATCAGTTTTCGAGG TATATTAAGAAAGAAATACATCAGACGTTCTTAATTTTAGTCTCGCTCTA ATTACATTTTCTTCTTTCGATATAGGCTAATGAACCGATGACCGTTCATT AAACTGACGATCGGCTAATTTAAAGTTAGCCTATAATTCAACTTTGCGAC TTTTTCGAATGTTTTGGGCCCAGGTTTTTTGGCTCCAAACATTCGATTTT TTGACGACATTTTAAACTTTTGAAAGCCTTTGCAGTAGGGGAACTTGCGT CAAAACACTTGAAAGGCTTCTTTTTTTCAAAAATCGTCAAAGTGGAACTC ACTAAGAAACGAGATGAAAAATCCCGGTTTTTAGTGAGGTGCTTGCTAAT TTGAACTTTACTGTTTGAGAATCTCTTTCAACGACAGCTCTAAATCACAA CTAACAACCCCTTTTATATATATGCTTTTTATTTTAACAGTTATGACATT CAAACTGTACATTGAAGTCAGAATCTTTTGCAACAACAACCCAGGGAGCT GTCTTATCTATGGAGATCTCTACTTCAACATTGGTAATCGTACTGATAAC CAAGGAGTCAAATTATGGTCATATGCATCAACTCAAGCTAAATTTATCCA ACACAAAGGAACAAGTTATGATGGTACCAACAAGATTTTCTACGAGAATC CTGATTTCAAAAATAGTTATGACAGGATTTCTTATCATGGAACCTTATAC CAAAACGGGTATGCATTCATTGGAGTTTCACCAAATACGAAATATGCTGA AGCTAAGTATGCCTATACCGGATTTAGACATCTAGTGCAATGGCAGAATA ACAACTATGTTGAAGTCAAAATCAGGTTCAGTGAAGACTGAGAAAATAAT CAGTCACGTGTTTGTCTCAGGTGAAAGTAGTTCCCGCGAAGAAGTTAGAA CTGTTTAAGGGATGTGAGTGAGATTGACTTGAAAACCAATTTTTTGATAA CTTCTGAAATATTTATCCAATCGACTTTAAATTTTGCAAGAGTGCACCTA GTATGAATTGACATCTTTGGTGAAAGTTTCGGCATCATTGATGACGTCAT CGCCACCTGATTGTTGCATGAGCAAAATTGACTCTCAGGATTGCAAAATT TCAAAATTTCTAGTAATTAAGTCATACCTTATTGGAACTAATTTTCGCGG GAATTAAATTTAGTGTTTTTCGCGGTTTTTCGTCAAAATCGCGAACATTT GACCCTGCGAAAAATTTTGAGAGTTAAAAACCGCGAAAATTAATATAAAT CTCATTTCAAGTTTATTTAAGATATTTAATGCATAGAAATTAATTCATTT ATTTATCAATTTTGTCCACTATGTTTAGTATTTATTCACTTTGTTTATAT ATCATACTTCAAAACCAC

Coding sequence (CDS) from alignment at sc0000111_pilon:222231..224048-

>MSTRG.13735.1.p1 ID=MSTRG.13735.1.p1|Name=MSTRG.13735.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1044bp|location=Sequence derived from alignment at sc0000111_pilon:222231..224048- (Clytia hemisphaerica_ch_hm2_pilon)
TTATGACATTCAAACTGTACATTGAAGTCAGAATCTTTTGCAACAACAAC
CCAGGGAGCTGTCTTATCTATGGAGATCTCTACTTCAACATTGGTAATCG
TACTGATAACCAAGGAGTCAAATTATGGTCATATGCATCAACTCAAGCTA
AATTTATCCAACACAAAGGAACAAGTTATGATGGTACCAACAAGATTTTC
TACGAGAATCCTGATTTCAAAAATAGTTATGACAGGATTTCTTATCATGG
AACCTTATACCAAAACGGGTATGCATTCATTGGAGTTTCACCAAATACGA
AATATGCTGAAGCTAAGTATGCCTATACCGGATTTAGACATCTAGTGCAA
TGGCAGAATAACAACTATGTTGAAGTCAAAATCAGGTTCAGTGAAGACTG
AATTGAATTTTCAACTCAAGATGACAGTACTATTATAACGAATCCTGGGG
AATTGATCGCCTCCTCGATCACAACACCGCCTCCGACAACGACAACCGCT
CTAACAACAACCCAGCCCCCACTTATGACATTCAAACTGTACATTGAAGT
CAGAATCTTTTGCAACAACAACCCAGGGAGCTGTCTTATCTATGGAGATC
TCTACTTCAACATTGGTAATCGTACTGATAACCAAGGAGTCAAATTATGG
TCATATGCATCAACTCAAGCTAAATTTATCCAACACAAAGGAACAAGTTA
TGATGGTACCAACAAGATTTTCTACGAGAATCCTGATTTCAAAAATAGTT
ATGACAGGATTTCTTATCATGGAACCTTATACCAAAACGGGTATGCATTC
ATTGGAGTTTCACCAAATACGAAATATGCTGAAGCTAAGTATGCCTATAC
CGGATTTAGACATCTAGTGCAATGGCAGAATAACAACTATGTTGAAGTCA
AAATCAGGTTCAGTGAAGACTGAATTGAATTTTCAACTCAAGATGACAGT
ACTATTATAACGAATCCTGGGGAATTGATCGCCTCCTCGATCACAACACC
GCCTCCGACAACGACAACCGCTCTAACAACAACCCAGCCCCCAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13735MSTRG.13735Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13735.1.p1.exon2MSTRG.13735.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13735.1.p1.exon1MSTRG.13735.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13735.1.p1MSTRG.13735.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000111_pilongenomesc0000111_pilon:222231..224048 -