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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:199788..202080- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13731.1.p1 ID=MSTRG.13731.1.p1|Name=MSTRG.13731.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2293bp|location=Sequence derived from alignment at sc0000111_pilon:199788..202080- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTGAAATATTTACAATCTTGTGGTTATGAAGGGGACATCAGAACAGGA
TAAAAACTAAGAATAACCCATCGCCGCATATAAATAATTTAAAAAAATTA
AATATTTATCTGTTCTGTACAGACTTAGAATGACGGGGAAGATCGTATCG
CACGCATTACCTTACTTAACTTAAGTTAACCTAAGAGAAGGAAGCACAAT
GTTACTGTTAATCACCTTAATTATTATAAACTTCAACACAGCAAGATCGA
GTAATATTTACCAATTAATTGCAAAGGAAAAAACCCTTGCATCTGAACAA
CCATTTACTAGGAGACCTTCAAAGTTTGGCATACAATGTATTAGCATGTG
CGACCACAGTCCTGAGTGTTTATCTTATGCATTCAATGGTCAAACGTGTT
ATCTATATGACGTCATGTTTAAAACAACCAATGGGGAGCATCGAGCATTG
AAAGATCAGACAGGCGCCGTATACCACTCTACAGTGGCAACCAACTGCAA
CGATTGGCTAGCGTTAGGGAGACGAAACAATGGATATTACACCATAGGAA
CAGAGAGCAATGGAAGACAGCAAAAAGAGAAAATATATTGTGAACTAAAC
GAAGTAAGACTTTCAATTTAAATTATGTCCTAACTTCACATTTGAACTGT
ACAATGTCACTACCAACACAAACAAAGCTTTTTATGAGAGAGAAATTCAA
ACATTCAAAAGGAACAAGATATAATTAAGTTTGGACAAAACACATAGTAA
TTTCTACTAATCATTAAAAGCATACTATCTTTTCTTTCATAGCAAAACAC
TCCAACTACAGCAGCTATGACAACCACAGCAACCACAGCAGCACCAACAA
CAACAACAACAACAGCAACCACAACAACAACAACAACAACTACTACTACT
ACGACGCCTCCTCCATGTGCGTATCTTTACAACCTCGTGCCCAGTGTATA
ATCAGTACAGATATCATACACTCTTATTTATAAGAACAAGCTGTTCTCAT
CTTTTTAAAGAACTTTGAGCCTCAATTCTAACTTTTTATTGCTTTTGAAT
TTAGTAATCCCAGGGTCAGCTTTGTTCTTAAATTATTCTTATTTTTCGTT
GTTTTCGAGCCTCGTCGTTCTTGTAAAATTGTTCTTGCAAAGGAAAAAGA
TTCTATCACACTAAACAGGCTAAACTCTGTCTGTTTATCCATAGTGAGGA
GAAAGTTGGGCCTCTTTTGAAGTCTATGCAATGCCTTTCTTTTAATTTCA
AGTAATGATTTTAACAGTCAATTTTCTGCCCACTTTTTGCATACTCTAAC
ATTTGAAATAGGCAGGGCTGAGCAGGAAGGAGAGTCGGCCGTCTAAACTA
GAATTAACTGATTACAGGCATCCCGTGAAAGTGTAACCAGTTTCAAAAAG
GCATTTTTTTCTTTCCATATAGTGTTAAATTTCCGTTTGGAAGTCAGAAT
CAAAATTTATTGTTCGGATGAATTGGATAGTACGTGTGAAGTGTATGGTG
AACTTTACGTCAATATCGGCAATCGTGCTGGAAATCAAAACATCGAACTT
TGGCGAAGAAATGAAAATGAAGCTATCAACACACAAAGATGGAGTGGACA
TAATATTGACACCCAACACTCTTTTCAGGAATATATGACCTTTACGCAAA
GTCAAGATGACGTCATTTTTTCGGGTCAATTTAAAGAAGAAGATCGAATT
TCTTCCGATGATCTTCTGGGATCGATCACAGGGAAACCGAACGCTGCCGT
ACGAGCAAATGAAATATACAATACAGACAGAACTGAAAGATTTACACAGG
GATCAAATTATGTCGAAATTATGATAAGATTCACACTGTCCTCTTAAAGT
TTCAAGGCCTTCTTTTGAGCATGGATTGAAAATGTAAAAACCTTACAGGT
CAAGAAGAAATATGGCGAATCTTGGTCCGTTTCAGACCTCTTTATGGGAT
CATAATAATATTGTTTTTAGTGGAACAGTCGGATTATTATTTGTCTTTTA
GCAGGAGTTTACTGAAAATTTACGCTGGAATGGTTCGATCAAACCTTTTT
TCGTCGCAGGAAAAGGAGTTAAAGTGATTTCAAAATCATACAAAAAGCAT
TGAAAGTCATTAAGTTTAATTTATTTCATTTTTACATGAGTGTGTTGGTT
AGTTTTGTAGCAGTTTTGATTTTTAGTAATTAATTTTTTTGGTAATACAC
TTTTTCGACCATAGTCAAGCGCGTGCCACTATATTATTTAATTTACCACC
TTAAACCCGATCCATTCTTTTTTTACACTTTTTTCTATCGTCT Coding sequence (CDS) from alignment at sc0000111_pilon:199788..202080- >MSTRG.13731.1.p1 ID=MSTRG.13731.1.p1|Name=MSTRG.13731.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2862bp|location=Sequence derived from alignment at sc0000111_pilon:199788..202080- (Clytia hemisphaerica_ch_hm2_pilon)
TGTTAAATTTCCGTTTGGAAGTCAGAATCAAAATTTATTGTTCGGATGAA
TTGGATAGTACGTGTGAAGTGTATGGTGAACTTTACGTCAATATCGGCAA
TCGTGCTGGAAATCAAAACATCGAACTTTGGCGAAGAAATGAAAATGAAG
CTATCAACACACAAAGATGGAGTGGACATAATATTGACACCCAACACTCT
TTTCAGGAATATATGACCTTTACGCAAAGTCAAGATGACGTCATTTTTTC
GGGTCAATTTAAAGAAGAAGATCGAATTTCTTCCGATGATCTTCTGGGAT
CGATCACAGGGAAACCGAACGCTGCCGTACGAGCAAATGAAATATACAAT
ACAGACAGAACTGAAAGATTTACACAGGGATCAAATTATGTCGAAATTAT
GATAAGATTCACACTGTCCTCTTAACAAAACACTCCAACTACAGCAGCTA
TGACAACCACAGCAACCACAGCAGCACCAACAACAACAACAACAACAGCA
ACCACAACAACAACAACAACAACTACTACTACTACGACGCCTCCTCCATA
TGTTACTGTTAATCACCTTAATTATTATAAACTTCAACACAGCAAGATCG
AGTAATATTTACCAATTAATTGCAAAGGAAAAAACCCTTGCATCTGAACA
ACCATTTACTAGGAGACCTTCAAAGTTTGGCATACAATGTATTAGCATGT
GCGACCACAGTCCTGAGTGTTTATCTTATGCATTCAATGGTCAAACGTGT
TATCTATATGACGTCATGTTTAAAACAACCAATGGGGAGCATCGAGCATT
GAAAGATCAGACAGGCGCCGTATACCACTCTACAGTGGCAACCAACTGCA
ACGATTGGCTAGCGTTAGGGAGACGAAACAATGGATATTACACCATAGGA
ACAGAGAGCAATGGAAGACAGCAAAAAGAGAAAATATATTGTGAACTAAA
CGAATGTTAAATTTCCGTTTGGAAGTCAGAATCAAAATTTATTGTTCGGA
TGAATTGGATAGTACGTGTGAAGTGTATGGTGAACTTTACGTCAATATCG
GCAATCGTGCTGGAAATCAAAACATCGAACTTTGGCGAAGAAATGAAAAT
GAAGCTATCAACACACAAAGATGGAGTGGACATAATATTGACACCCAACA
CTCTTTTCAGGAATATATGACCTTTACGCAAAGTCAAGATGACGTCATTT
TTTCGGGTCAATTTAAAGAAGAAGATCGAATTTCTTCCGATGATCTTCTG
GGATCGATCACAGGGAAACCGAACGCTGCCGTACGAGCAAATGAAATATA
CAATACAGACAGAACTGAAAGATTTACACAGGGATCAAATTATGTCGAAA
TTATGATAAGATTCACACTGTCCTCTTAACAAAACACTCCAACTACAGCA
GCTATGACAACCACAGCAACCACAGCAGCACCAACAACAACAACAACAAC
AGCAACCACAACAACAACAACAACAACTACTACTACTACGACGCCTCCTC
CATATGTTACTGTTAATCACCTTAATTATTATAAACTTCAACACAGCAAG
ATCGAGTAATATTTACCAATTAATTGCAAAGGAAAAAACCCTTGCATCTG
AACAACCATTTACTAGGAGACCTTCAAAGTTTGGCATACAATGTATTAGC
ATGTGCGACCACAGTCCTGAGTGTTTATCTTATGCATTCAATGGTCAAAC
GTGTTATCTATATGACGTCATGTTTAAAACAACCAATGGGGAGCATCGAG
CATTGAAAGATCAGACAGGCGCCGTATACCACTCTACAGTGGCAACCAAC
TGCAACGATTGGCTAGCGTTAGGGAGACGAAACAATGGATATTACACCAT
AGGAACAGAGAGCAATGGAAGACAGCAAAAAGAGAAAATATATTGTGAAC
TAAACGAATGTTAAATTTCCGTTTGGAAGTCAGAATCAAAATTTATTGTT
CGGATGAATTGGATAGTACGTGTGAAGTGTATGGTGAACTTTACGTCAAT
ATCGGCAATCGTGCTGGAAATCAAAACATCGAACTTTGGCGAAGAAATGA
AAATGAAGCTATCAACACACAAAGATGGAGTGGACATAATATTGACACCC
AACACTCTTTTCAGGAATATATGACCTTTACGCAAAGTCAAGATGACGTC
ATTTTTTCGGGTCAATTTAAAGAAGAAGATCGAATTTCTTCCGATGATCT
TCTGGGATCGATCACAGGGAAACCGAACGCTGCCGTACGAGCAAATGAAA
TATACAATACAGACAGAACTGAAAGATTTACACAGGGATCAAATTATGTC
GAAATTATGATAAGATTCACACTGTCCTCTTAACAAAACACTCCAACTAC
AGCAGCTATGACAACCACAGCAACCACAGCAGCACCAACAACAACAACAA
CAACAGCAACCACAACAACAACAACAACAACTACTACTACTACGACGCCT
CCTCCATATGTTACTGTTAATCACCTTAATTATTATAAACTTCAACACAG
CAAGATCGAGTAATATTTACCAATTAATTGCAAAGGAAAAAACCCTTGCA
TCTGAACAACCATTTACTAGGAGACCTTCAAAGTTTGGCATACAATGTAT
TAGCATGTGCGACCACAGTCCTGAGTGTTTATCTTATGCATTCAATGGTC
AAACGTGTTATCTATATGACGTCATGTTTAAAACAACCAATGGGGAGCAT
CGAGCATTGAAAGATCAGACAGGCGCCGTATACCACTCTACAGTGGCAAC
CAACTGCAACGATTGGCTAGCGTTAGGGAGACGAAACAATGGATATTACA
CCATAGGAACAGAGAGCAATGGAAGACAGCAAAAAGAGAAAATATATTGT
GAACTAAACGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000111_pilon | genome | sc0000111_pilon:199788..202080 - |
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