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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:191765..195076- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13730.1.p1 ID=MSTRG.13730.1.p1|Name=MSTRG.13730.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3312bp|location=Sequence derived from alignment at sc0000111_pilon:191765..195076- (Clytia hemisphaerica_ch_hm2_pilon)
AGATATGACAAAGTGAAAAATTTGAACCAAAGAACATTATTTCAAGTTCG
ATATTAAACCATAGGTCAAATAAAAAGGGATCTAAAATGTTTATATTCGT
CTTAGTATTTTCGCTTACATTGCCAGTAAGAATAAATTGTGTTCTTTATG
AAAGTGAACAAGTTCAGACGTCTGTAGACAACGCCACATTTGTTGAATCT
GCACGTTCAACAGTTGAATGTACTTTACAATGTCAACGTTTAAAGAAAAC
ACCTTTCTACACTGAAGATAAGATGTGTTATTGCTTGGATAAAATCGAAA
ATGGTGTCGAACTTGAGTATGGTGTATCTTATGCAAAGGTAAATTTAACT
CTAGCAAAAATAAAATCTTTGGTCAAATAAATTCCGTAAAAATTTTACTT
TACAACTTGCAGTTTAGAGTTTGAAGACTTAAATTTTATGACTCTCTCAT
CTGTATCATTTTGCCTGTTGAAAATTGAACTGAATAACATCCATTTCATA
TTTCAGGTTGAGTTTTCAACTCAGGATGACAACATCATAACAGATCCTAC
AGAGTTGATCGCTTTCATGATAACAACACCACCTCCAACGACAACGACTC
CCACGACAACGACCACTACTACCACAACAACGACTACCCCGACAACGACA
ACGACTACCCCGACAACGACGACGACTACCCCAACAACGACAACAACTAC
TCCGACAACAACAACGACCACCCCGACAACAACAACGACCACACCAACGA
CAACTACGACCACCCCAACGACAACAACGACCACCCCGACAACAACTACG
ACCACCCCGACGACAACTACGACCACCCCGACAACAACTACGACCACCCC
AACGACAACTACGACCACCCCGACGACAACTACGACCACTCCTACAACAA
CTACTACGACAACAACAACCACCACAACAACTACTTTGGCTCCTACAACA
CAGCCACAACGTAAGTGCATTTAATAAAGAAACAAGGGGTTTTTTACAGA
GATTAGACGCGCACTTTTCTAACCTCTGGCTTTCCATTTTCTGGACTTGA
TCCAATTAAGACAAGTTTGTCACTGTTGAGAAGTCCAATAACTTATTCAA
AAAGCCATCCAACGAGTGGACGTACCACAATCATCCAAAACATGACGGTT
TTCTTGTTTTTCAGGTAAATTGACATGCAATATCATAAGACAGAGTCCAT
TTTTAACTAATTGACTCGTTTTCTTTTATTTTAACAGTGAAACGGTTCAA
ATTGAATGTACGTCTAACAATCTATTGTTACGACGATGCTGGATCGTCTT
GTGAATTGTATGGGCAACTAAAGTTGAACATTGGAGAAAGATCCACTAAC
CAAGGAGTGCAGCTCTGGCAAAAGACAGACGATAATTACATTGACCTTAC
GGAATACATGGAACATCATATAAACATGGTCCATAGTTTTTATGAATATG
ATGACTTTATTAACAGCCGTGATATGATCGACATTATTGGGGCTGTCTAT
GAAGTAGACACTTGGGATGTCGACACCGTTGGTTTGATTACTGGCAAATC
TAATGCTTATGTTTACGCTAAAGATGCATTTAATATGTATAAAACTGAAA
CATTTCAAAGTGATTATGAAGATTATGTTAAAGTGGGAGTCAAGTATGAA
TATGATTAATGATTATTGTAAAACAACAAAATAAGGCCATGTCATACAGT
ACACTCTCACTAATTCGAACTTCTATTTTATGTGAATATTTCTATAATTC
GAACAAAATCACCGTCAATTTTCCCTAGGAACTTTAATAAAACACTTTCT
GTAATTCTAACTTCTGTAATTCGAACAATTTTTTGTCCCCCCTGTCCCCC
TCTCGACAAATTCTCTCGCTAATTCGAGTTTTCAATGTGTTAGATACTCA
TTCGAATGTCATGAAGCTTTGAAATTTCCACTAAACATGCTTTTATGATT
ATTCGAAATTGTCACGAATATTAGAACGGGCTATATTGAATATTTGTATC
AGGATCTTCAAAATTTTGTTTTTGGAATTCGCGAATGAACGTTTTTATTT
AAGTTTTTATCGTTCTAAAGCTCCCTCCGATTTAGCCTAAGCTGGTAATT
CAAGCTAGAGCGACTTTCTATTGAGGTCTGAATCACTTTGAAAAAATTAC
AGTGAAACAAAATATAGCGCGTGTTGTTCTTTCTGACAATAGAATATCAC
TAGGTTCAAAAACGACCCAAAATTAAGCCTTTTAAGTTAGACCCTTACAG
TGCGTTTTTTTTATTTTTTTTTTCCCTTTTTAGGCAAAATATGGTCAGAT
TTTACAAATTTTACACCCTTAGCACTTTTTCTCGTCTTTGCTCATTTCGA
CCCTTACAGTGCACCCTTGANCTTTTCTAACCTCTGGCTTTCCATTTTCT
GGACTTGATCCAATTAAGACAAGTTTGTCACTGTTGAGAAGTCCAATAAC
TTATTCAAAAAGCGATCCAACGAGTGGACGTACCACAACCTTCCAAAACA
TGACGGTTTTCTTGTTTTTCAGGTAAATTGACATACAATATCATAAGACT
TTTAACTAATTGACTCGTTTTCTTTTATTTTAACAGTGAAACGGTTCAAA
TTGAATGTACGTCTAACAATCTATTGTTACGACGATGCTGGATCGTCTTG
TGAATTGTATGGGCAACTAAAGTTGAACATTGGAGAAAGATCCACTAACC
AAGGAGTGCAGCTCTGGCAAAAAACAGACGATAATTACATTGACCTTACG
GAATACATGGAACATCATATAAACATGGTCCATAGTTTTTATGAATATGA
TGACTTTATTAACAGCCGTGATATGATCGACATTATTGGAGCTGTCTATG
AAGTAGACACTTGGGATGTCGACACCGTTGGTTTGATTACTGGCAAATCT
AATGCTTATGTTTACGCTAAAGATGCATTTAATGTGTATAAAACTGAAAC
ATTTCAAAGTGATTATGAAGATTATGTTAAAGTGGGAGTCAAGTATGAAT
ATGATTAATGATTATTGTAAAACAACAAAATAAGGCCATGTCATACATTA
CACTCTCACTAATTCGAACTTCTATTTTATGCGAATATTTCTATAATTCG
AACAAAATCACCGTCAATTTTCCCTAGGAACTTTAATAAAACACTTTCTG
TAATTCGAACTTCTGTAATTCGAGCAATTTTTTGTCCCCCTGTCCCCCTC
TAGACAAATTCTCTTGCTTGTTCGAGTTTTCAATGTGTTAAGGGGTTTAG
ACTCATTCGAATGTCATGAAGCTTTGAAATTTCCACTAAACATGCTTTTA
TGATTATTCGAA Coding sequence (CDS) from alignment at sc0000111_pilon:191765..195076- >MSTRG.13730.1.p1 ID=MSTRG.13730.1.p1|Name=MSTRG.13730.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3384bp|location=Sequence derived from alignment at sc0000111_pilon:191765..195076- (Clytia hemisphaerica_ch_hm2_pilon)
TGAAACGGTTCAAATTGAATGTACGTCTAACAATCTATTGTTACGACGAT
GCTGGATCGTCTTGTGAATTGTATGGGCAACTAAAGTTGAACATTGGAGA
AAGATCCACTAACCAAGGAGTGCAGCTCTGGCAAAAAACAGACGATAATT
ACATTGACCTTACGGAATACATGGAACATCATATAAACATGGTCCATAGT
TTTTATGAATATGATGACTTTATTAACAGCCGTGATATGATCGACATTAT
TGGAGCTGTCTATGAAGTAGACACTTGGGATGTCGACACCGTTGGTTTGA
TTACTGGCAAATCTAATGCTTATGTTTACGCTAAAGATGCATTTAATGTG
TATAAAACTGAAACATTTCAAAGTGATTATGAAGATTATGTTAAAGTGGG
AGTCAAGTATGAATATGATTAAGTTGAGTTTTCAACTCAGGATGACAACA
TCATAACAGATCCTACAGAGTTGATCGCTTTCATGATAACAACACCACCT
CCAACGACAACGACTCCCACGACAACGACCACTACTACCACAACAACGAC
TACCCCGACAACGACAACGACTACCCCGACAACGACGACGACTACCCCAA
CAACGACAACAACTACTCCGACAACAACAACGACCACCCCGACAACAACA
ACGACCACACCAACGACAACTACGACCACCCCAACGACAACAACGACCAC
CCCGACAACAACTACGACCACCCCGACGACAACTACGACCACCCCGACAA
CAACTACGACCACCCCAACGACAACTACGACCACCCCGACGACAACTACG
ACCACTCCTACAACAACTACTACGACAACAACAACCACCACAACAACTAC
TTTGGCTCCTACAACACAGCCACAACATGTTTATATTCGTCTTAGTATTT
TCGCTTACATTGCCAGTAAGAATAAATTGTGTTCTTTATGAAAGTGAACA
AGTTCAGACGTCTGTAGACAACGCCACATTTGTTGAATCTGCACGTTCAA
CAGTTGAATGTACTTTACAATGTCAACGTTTAAAGAAAACACCTTTCTAC
ACTGAAGATAAGATGTGTTATTGCTTGGATAAAATCGAAAATGGTGTCGA
ACTTGAGTATGGTGTATCTTATGCAAAGTGAAACGGTTCAAATTGAATGT
ACGTCTAACAATCTATTGTTACGACGATGCTGGATCGTCTTGTGAATTGT
ATGGGCAACTAAAGTTGAACATTGGAGAAAGATCCACTAACCAAGGAGTG
CAGCTCTGGCAAAAAACAGACGATAATTACATTGACCTTACGGAATACAT
GGAACATCATATAAACATGGTCCATAGTTTTTATGAATATGATGACTTTA
TTAACAGCCGTGATATGATCGACATTATTGGAGCTGTCTATGAAGTAGAC
ACTTGGGATGTCGACACCGTTGGTTTGATTACTGGCAAATCTAATGCTTA
TGTTTACGCTAAAGATGCATTTAATGTGTATAAAACTGAAACATTTCAAA
GTGATTATGAAGATTATGTTAAAGTGGGAGTCAAGTATGAATATGATTAA
GTTGAGTTTTCAACTCAGGATGACAACATCATAACAGATCCTACAGAGTT
GATCGCTTTCATGATAACAACACCACCTCCAACGACAACGACTCCCACGA
CAACGACCACTACTACCACAACAACGACTACCCCGACAACGACAACGACT
ACCCCGACAACGACGACGACTACCCCAACAACGACAACAACTACTCCGAC
AACAACAACGACCACCCCGACAACAACAACGACCACACCAACGACAACTA
CGACCACCCCAACGACAACAACGACCACCCCGACAACAACTACGACCACC
CCGACGACAACTACGACCACCCCGACAACAACTACGACCACCCCAACGAC
AACTACGACCACCCCGACGACAACTACGACCACTCCTACAACAACTACTA
CGACAACAACAACCACCACAACAACTACTTTGGCTCCTACAACACAGCCA
CAACATGTTTATATTCGTCTTAGTATTTTCGCTTACATTGCCAGTAAGAA
TAAATTGTGTTCTTTATGAAAGTGAACAAGTTCAGACGTCTGTAGACAAC
GCCACATTTGTTGAATCTGCACGTTCAACAGTTGAATGTACTTTACAATG
TCAACGTTTAAAGAAAACACCTTTCTACACTGAAGATAAGATGTGTTATT
GCTTGGATAAAATCGAAAATGGTGTCGAACTTGAGTATGGTGTATCTTAT
GCAAAGTGAAACGGTTCAAATTGAATGTACGTCTAACAATCTATTGTTAC
GACGATGCTGGATCGTCTTGTGAATTGTATGGGCAACTAAAGTTGAACAT
TGGAGAAAGATCCACTAACCAAGGAGTGCAGCTCTGGCAAAAAACAGACG
ATAATTACATTGACCTTACGGAATACATGGAACATCATATAAACATGGTC
CATAGTTTTTATGAATATGATGACTTTATTAACAGCCGTGATATGATCGA
CATTATTGGAGCTGTCTATGAAGTAGACACTTGGGATGTCGACACCGTTG
GTTTGATTACTGGCAAATCTAATGCTTATGTTTACGCTAAAGATGCATTT
AATGTGTATAAAACTGAAACATTTCAAAGTGATTATGAAGATTATGTTAA
AGTGGGAGTCAAGTATGAATATGATTAAGTTGAGTTTTCAACTCAGGATG
ACAACATCATAACAGATCCTACAGAGTTGATCGCTTTCATGATAACAACA
CCACCTCCAACGACAACGACTCCCACGACAACGACCACTACTACCACAAC
AACGACTACCCCGACAACGACAACGACTACCCCGACAACGACGACGACTA
CCCCAACAACGACAACAACTACTCCGACAACAACAACGACCACCCCGACA
ACAACAACGACCACACCAACGACAACTACGACCACCCCAACGACAACAAC
GACCACCCCGACAACAACTACGACCACCCCGACGACAACTACGACCACCC
CGACAACAACTACGACCACCCCAACGACAACTACGACCACCCCGACGACA
ACTACGACCACTCCTACAACAACTACTACGACAACAACAACCACCACAAC
AACTACTTTGGCTCCTACAACACAGCCACAACATGTTTATATTCGTCTTA
GTATTTTCGCTTACATTGCCAGTAAGAATAAATTGTGTTCTTTATGAAAG
TGAACAAGTTCAGACGTCTGTAGACAACGCCACATTTGTTGAATCTGCAC
GTTCAACAGTTGAATGTACTTTACAATGTCAACGTTTAAAGAAAACACCT
TTCTACACTGAAGATAAGATGTGTTATTGCTTGGATAAAATCGAAAATGG
TGTCGAACTTGAGTATGGTGTATCTTATGCAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000111_pilon | genome | sc0000111_pilon:191765..195076 - |
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