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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000111_pilon:186637..188917- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13729.1.p1 ID=MSTRG.13729.1.p1|Name=MSTRG.13729.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2281bp|location=Sequence derived from alignment at sc0000111_pilon:186637..188917- (Clytia hemisphaerica_ch_hm2_pilon)
GTGAAAATAAGAACATGTTAAAAAAACTCAAAAAGTTAAGACCATCCTAA
CTAAGGCTTTAAAAAATTGGATGTTCTTATGAAATAACGTGAACTTATTA
TACTCAGGTCGAACATAAAAATGCATTAGTCGAAGGTTTGAAGCAGAAAA
CATGAATAATGTGAAACTTCTACTTTTGGTTGCTAGTTTGAAGCAATTCT
TTGTTGGAAAATCACTTGCCTACCTATATGAAAGTGAACAAGTTCAGACG
TCTTTAGACAACGCCATATTTGTTGAATCTGCACGTTCAACAGTTGAATG
TACTTTACAATGTCAACGTTCAAAGAAAACACCTTTCTACACTGAAGATA
AGATGTGTTATTGTTTGGATAAAATCGATCAAAGAAACAAAATCGAAAGA
GGGCTACTCTTACGACAGGTATTTCAAGATTTGTTATTTCCAAGTCGATA
TAGCTCTTGTATTTGTATTTCTCACAATTACGCCATAGCGTCAACCCCCC
TGACATTTGGGGGGATTACACCCAAAAAATTGCAGACGAAAACTGGGAGC
TAAAATACAGCCAAATATTTGGGGGGACCTGATATGTTTGGAGAGGAGCT
GGAATTTCAATAACATGACTGGGGGCTGATTATTTCTTCTAAATTATTTT
TCTTTAAATCACCACATTTTCATCCAAAAACCTTTCATTTTACAGTCTAT
TGATTCTGTTTGTTTTCACTTGTGTCTACCATCTTGAATTAACTATAGTC
AATGGAATATAAATGTGATTTTCCTAAAAACAATTTAAATCAACAACTAT
TTTATACTAGGTATAGGAATGGGGGCTGCTTAGAAAACTTTTAATACTTG
GGGGAACCTAAATCTTTGGGGGACCTGTTTTTTGTCTGGGACCTAGACCT
GGGCTGACCCCATGTACGTGTATCATTTCTTTTGTGTGAGTAAAGGCCTT
TCACTATTTATCTGTATTTTAGATCGCGTTTCTGTCTGCAGATGAGATTT
GTCACGAAGAGGAAAAAGCGTCACCGAAAGAGAGCACACCAACTAAAACT
ATGACTAACCCGACAACGACGATCACCCCTACGACTACGAAAACGACGAC
CACCCGCACAACAACGACAACCACTCCAACTACTACAACGACAACCACTC
CGACTACTACAACGACAGCCCACCCGACTACTACAACGACCACCCCGACT
ACAACAACGACCCCTACAACAACAACGACAACCACTCTGACTACAACAAC
GACCACCCCAACAACAACAACGACCATTCCGAAACCAACAACGACGACCA
ACCCGACTACAACAACGACTACAACGACGACGACCCCTACAACAACACAA
TTACAGTGTAAGTAGAGTTTTATTAACATTTCTAAGATGAAGTTAGTTCA
AAAACAAGTTTTTAGAGAACTCCGGCTATTTCCGTCTACAAGAGTTAATG
TTTTGAGATTGAAGTCGACTTGTAGTAGTCAGTTTTTATCTGATCAAAAG
AGATTCATTCAAATATTCATTCATTTCAGTAATCCGTTTTAAGATGACCA
TCAAGATCTTCATTTACTGTCACTCCGATTCTGGAAATAGTTGTGAAGTC
TACGGCTCATTAAATGTCAAAATTGGAAACCGTCCAGATAATCAAAATTT
TCAAATCTGGAAGAGAACAAGCAGCCAATTATTATCTACAACTGAAGGCA
GGAAATATACGATAACAACATATAAGCAGTTTTACGAATATGAGGCTTTT
ACAACAAACAATGATAAAGTGATTTTTACCGGAGCTTTCTACGAAAAAGA
CACAATCGGTTATGATACGTTGGCAGTTATAACAGGAAGAGCGCAAAGTG
AGATCAACTCTAAAGACATTTACGGTAACTCTCTAACCCCGAGATATAGT
TATGGCAGTCACTATGTTAAACTGGATGTGAAATTTCAAAGAGATAATTA
AGGCTAAAAACTGAAGATTGTTTTGAAACCTAATTAGCTTATGGTACTTT
ATGGAGTCTATAACAAGCTAGAGTACTAAGTGAACTATAAACAATCTAAC
TTAGTGAAAACAGGGCTTTGGAATAGTTGGCTTCTAACGTCCAACGTTAA
AAACAGTATGATATTAAAACTACCACACGATTGTTAGAATCGTTTTGAAA
CTTGTTGTTAAAGACTACACGTTTTTTTATGAGAACATCATCATCAAGTT
TTTCATGCCTTTGAATGTTCTTAACTTTTCTGGTCTTAAATCTAACAAGC
AACATGCTGAATGGATGAGAATCAGATAAAA Coding sequence (CDS) from alignment at sc0000111_pilon:186637..188917- >MSTRG.13729.1.p1 ID=MSTRG.13729.1.p1|Name=MSTRG.13729.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3222bp|location=Sequence derived from alignment at sc0000111_pilon:186637..188917- (Clytia hemisphaerica_ch_hm2_pilon)
TAATCCGTTTTAAGATGACCATCAAGATCTTCATTTACTGTCACTCCGAT
TCTGGAAATAGTTGTGAAGTCTACGGCTCATTAAATGTCAAAATTGGAAA
CCGTCCAGATAATCAAAATTTTCAAATCTGGAAGAGAACAAGCAGCCAAT
TATTATCTACAACTGAAGGCAGGAAATATACGATAACAACATATAAGCAG
TTTTACGAATATGAGGCTTTTACAACAAACAATGATAAAGTGATTTTTAC
CGGAGCTTTCTACGAAAAAGACACAATCGGTTATGATACGTTGGCAGTTA
TAACAGGAAGAGCGCAAAGTGAGATCAACTCTAAAGACATTTACGGTAAC
TCTCTAACCCCGAGATATAGTTATGGCAGTCACTATGTTAAACTGGATGT
GAAATTTCAAAGAGATAATTAAATCGCGTTTCTGTCTGCAGATGAGATTT
GTCACGAAGAGGAAAAAGCGTCACCGAAAGAGAGCACACCAACTAAAACT
ATGACTAACCCGACAACGACGATCACCCCTACGACTACGAAAACGACGAC
CACCCGCACAACAACGACAACCACTCCAACTACTACAACGACAACCACTC
CGACTACTACAACGACAGCCCACCCGACTACTACAACGACCACCCCGACT
ACAACAACGACCCCTACAACAACAACGACAACCACTCTGACTACAACAAC
GACCACCCCAACAACAACAACGACCATTCCGAAACCAACAACGACGACCA
ACCCGACTACAACAACGACTACAACGACGACGACCCCTACAACAACACAA
TTACAGTATGAATAATGTGAAACTTCTACTTTTGGTTGCTAGTTTGAAGC
AATTCTTTGTTGGAAAATCACTTGCCTACCTATATGAAAGTGAACAAGTT
CAGACGTCTTTAGACAACGCCATATTTGTTGAATCTGCACGTTCAACAGT
TGAATGTACTTTACAATGTCAACGTTCAAAGAAAACACCTTTCTACACTG
AAGATAAGATGTGTTATTGTTTGGATAAAATCGATCAAAGAAACAAAATC
GAAAGAGGGCTACTCTTACGACAGTAATCCGTTTTAAGATGACCATCAAG
ATCTTCATTTACTGTCACTCCGATTCTGGAAATAGTTGTGAAGTCTACGG
CTCATTAAATGTCAAAATTGGAAACCGTCCAGATAATCAAAATTTTCAAA
TCTGGAAGAGAACAAGCAGCCAATTATTATCTACAACTGAAGGCAGGAAA
TATACGATAACAACATATAAGCAGTTTTACGAATATGAGGCTTTTACAAC
AAACAATGATAAAGTGATTTTTACCGGAGCTTTCTACGAAAAAGACACAA
TCGGTTATGATACGTTGGCAGTTATAACAGGAAGAGCGCAAAGTGAGATC
AACTCTAAAGACATTTACGGTAACTCTCTAACCCCGAGATATAGTTATGG
CAGTCACTATGTTAAACTGGATGTGAAATTTCAAAGAGATAATTAAATCG
CGTTTCTGTCTGCAGATGAGATTTGTCACGAAGAGGAAAAAGCGTCACCG
AAAGAGAGCACACCAACTAAAACTATGACTAACCCGACAACGACGATCAC
CCCTACGACTACGAAAACGACGACCACCCGCACAACAACGACAACCACTC
CAACTACTACAACGACAACCACTCCGACTACTACAACGACAGCCCACCCG
ACTACTACAACGACCACCCCGACTACAACAACGACCCCTACAACAACAAC
GACAACCACTCTGACTACAACAACGACCACCCCAACAACAACAACGACCA
TTCCGAAACCAACAACGACGACCAACCCGACTACAACAACGACTACAACG
ACGACGACCCCTACAACAACACAATTACAGTATGAATAATGTGAAACTTC
TACTTTTGGTTGCTAGTTTGAAGCAATTCTTTGTTGGAAAATCACTTGCC
TACCTATATGAAAGTGAACAAGTTCAGACGTCTTTAGACAACGCCATATT
TGTTGAATCTGCACGTTCAACAGTTGAATGTACTTTACAATGTCAACGTT
CAAAGAAAACACCTTTCTACACTGAAGATAAGATGTGTTATTGTTTGGAT
AAAATCGATCAAAGAAACAAAATCGAAAGAGGGCTACTCTTACGACAGTA
ATCCGTTTTAAGATGACCATCAAGATCTTCATTTACTGTCACTCCGATTC
TGGAAATAGTTGTGAAGTCTACGGCTCATTAAATGTCAAAATTGGAAACC
GTCCAGATAATCAAAATTTTCAAATCTGGAAGAGAACAAGCAGCCAATTA
TTATCTACAACTGAAGGCAGGAAATATACGATAACAACATATAAGCAGTT
TTACGAATATGAGGCTTTTACAACAAACAATGATAAAGTGATTTTTACCG
GAGCTTTCTACGAAAAAGACACAATCGGTTATGATACGTTGGCAGTTATA
ACAGGAAGAGCGCAAAGTGAGATCAACTCTAAAGACATTTACGGTAACTC
TCTAACCCCGAGATATAGTTATGGCAGTCACTATGTTAAACTGGATGTGA
AATTTCAAAGAGATAATTAAATCGCGTTTCTGTCTGCAGATGAGATTTGT
CACGAAGAGGAAAAAGCGTCACCGAAAGAGAGCACACCAACTAAAACTAT
GACTAACCCGACAACGACGATCACCCCTACGACTACGAAAACGACGACCA
CCCGCACAACAACGACAACCACTCCAACTACTACAACGACAACCACTCCG
ACTACTACAACGACAGCCCACCCGACTACTACAACGACCACCCCGACTAC
AACAACGACCCCTACAACAACAACGACAACCACTCTGACTACAACAACGA
CCACCCCAACAACAACAACGACCATTCCGAAACCAACAACGACGACCAAC
CCGACTACAACAACGACTACAACGACGACGACCCCTACAACAACACAATT
ACAGTATGAATAATGTGAAACTTCTACTTTTGGTTGCTAGTTTGAAGCAA
TTCTTTGTTGGAAAATCACTTGCCTACCTATATGAAAGTGAACAAGTTCA
GACGTCTTTAGACAACGCCATATTTGTTGAATCTGCACGTTCAACAGTTG
AATGTACTTTACAATGTCAACGTTCAAAGAAAACACCTTTCTACACTGAA
GATAAGATGTGTTATTGTTTGGATAAAATCGATCAAAGAAACAAAATCGA
AAGAGGGCTACTCTTACGACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000111_pilon | genome | sc0000111_pilon:186637..188917 - |
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