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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000110_pilon:413358..417199+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13687.5.p1 ID=MSTRG.13687.5.p1|Name=MSTRG.13687.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3842bp|location=Sequence derived from alignment at sc0000110_pilon:413358..417199+ (Clytia hemisphaerica_ch_hm2_pilon)
AACTGGTTGGTCACCATATTGTCAtttttgtatgcctttggttgtttttt
ttcttttgttatgttttttgtgtatacgtgttttCATGGAAATTAAGCTT
TATGTAAACCTTTTGGTTTGAACGAGGGGTAATCTTGCTATAAAAAGAGA
TTGTCCGTATATCATTCTAGAATCAGGCTTCGTGCAATATAGAGAATCTT
AACTCAATACTGAGCTATTGGTTAATTTGAAAGCTTTGGTAGATCTCTCA
GTGATTTTTGAGAATCTGAAATTTTGTGCAGCATGAAGTACGATGAATCA
AATCTTCTTTCTTTGTCTTCCAACACAATGGAACTTATTCATGCGTTGAG
TGATTGTTTCTTTGGGCCAATGACTGCTAATTGTCAATTGAAGAAAGGTA
GATTGgttgacaaaagattttttttttttttggaattggttcttaagttt
tgttttatttgcgttttgtttacaatcgttttgAGCTTCGAAAACTACCA
TTAGAAAATCAAGGACATACTGCCCAGAAACGCCCTATCTTTAACAGACT
TTGATTAAAAAACACAATATGCGTAACCAAGTAAAACTCAAACATCCCTT
TTTGCGTCGTTTCTTTTGTAGCGATGGTTATTCCGAGTGTAATATATACC
TTACTATAAAACGGCAAATATTGGCCATCCATGGATTTAATATAGATGGC
TTCTCTATATTAAATCCATGGGTTATCTAATAGCTTTAGAATAATAGACT
TTATTCATGTCTATTTAGTTTCGATACATGCAATTCAACTTTGGTTGATT
CAGTGTTTAGCTTGCCAAGGGAAATCGAAACTTACTTAGTAAACCAAGAG
TGTTATTGACTTTAACCAAGAATTAGAATAACAGGAAACGAGAAATTTTG
acgttccaaaaaaaaaaaaaaacaactcaaatACTAGGTTACTTGCTGTC
TTataattttcaacaaattacgaattttaaaatttttttatgttttttcc
gtgtttttttcaagtttagtCAATCGACGGGCATATAATCATAATGAGCG
CCAGTCTGATTTGCAATTGATTTGCAATGCAATCTTTTTCACCAGTTAGG
CGAAAATTATTACGTCATCATTCCTTTTAAGATAAAAATCATGGGCTCAA
AATCAGACTTACGGATATAAACCAACCTTGTGAAAATTTCCCTGTACATT
CCCAACATTACTATAAAGAATTAGATCTAAAAGTCAGGTTGCCATGAGTA
GTGTTTCTTTCGTAGTAGAAAGAATTTATAGCAGCCCTCCATTACAAGGT
TGAAAGTCGATGAAAATGGATACACTAGAGTGCCCTTCAACATTGTCAAG
TTTTGTAAAGAGAAATCTTACGACCCTCGACTTGTTTTACATCTAACGTT
CTTGTATTCTTCTGTTTAAATTAAAAAGCCCTTTTTGTTATAAAACACAA
AAATAGCATCACAGTCTtctaaacccccccccccccccctaaaggAGCAG
TGCATAAACAAAGCTTACGGACAGTTCTTGCGAAATTGGCCTAAAAAGTG
AAATCAAATTCCTACAAAATTTTTATGAATGAATAAACAAAGAGTATAGT
TTTCTGACAAGTAGAAAATTCGTAAAAGTTaaattctacaaaaaaatgtt
tgcgCAAAAATTTGTTTCCATAAGGTTTGTAAATGGTAGGTGGTGCGAAC
ATGACCTAGAGTGAATGCTGAGTAAAATTGAAAGCATTCCTCTTCGGATA
AAATGGGAGTAATCCTGCTAATACTATAGTGATGAACAATACCCGCTTTA
TCAATGTAACTATTTTTAGTGAAAACGCATAATAGGTCGCGATGCGATAA
TATAAACAAAAGCTGGCGTTGGATAAACAAGAATTTCTATTCTTCTCAAA
TACGCCATGACATTGATGCTTTGAaggatttgttgttttttgtggTTTGG
GAAGGGTACCACTTGTATATAAAAGCTAGAAACATGTACCTACTTCATAT
CACACTTCTACTTCAAAACACAACAAAATTTGTGAGGTACTTTTGACTCT
CTCACACTTATAACAAATACGATTTTCTAAATTGGTACTCTTTGATACTC
ACAGGTGACCCATCGATCAATACAACAATTTTACCGACAGTTCAGCCGAA
AACCGAGTACGACCCGACATCACACGACATGCATGCGACAAACGAACAAC
TTGTACAACAAATGCACCATCAAACGACGACAAAACCAATTCGaaaaaaa
ccaagaattttattttcacaatCTCAAGTTATGGAGTTAGAGAAGAAATT
TAAAGAACAAAAATATCTATCAGCTTCCGAACGTGACCAAATGGCATCAA
AATTAAATCTAACACCAACACAGGTAAATTATAAATGACTTGCCTTCTTT
CCAATGTGAATTTATATCATTAGCCTTAGCTCATACTTGAGCCCAACAAA
CAAATTTAAAGGTAGTGCAAGTTGATCTGGGTACGAGGTTGGCCTTAGCT
ATAACTCATGTTACTATATTGCTTAGGACTTCCATTTGGTTAATTGGATC
AAGCCTATAGTTGCCACACTTCCAGAATAGATTGAAAAACAGCCAATCAA
AGAGTTCAAGTTCTacatttcaataaaaagtttgcacttcaatcaaaaga
tttccagaaaaatcttacaaaaaatcaaaaccactCATTTACTacgttta
aattttttcattccaGGTCAAAATTTGGTTCCAAAACAAAAGATACAAGT
GCAAGAAACAATCACAAGAATCCAGGCGTGGAATCCACCCACCGCCCTAC
GAATGGCCTTCACTCTTCAACCACCAACGTAACGTTCCTGTCTTAGTACA
ACCACCATCATGCCCGCCCCATTGTTATCGCCCTTCGCCACCATCGGTTA
ATTTAAACTCGCCTATCCCGAGTGAAAGCTATACCGGTTATTTCCCGGAA
AGCTACACTGCACCACATTACAATAACAATGTTTATTCAACGTCACCTTA
CAACCAATGGCCGTGCTACAAATGATACCATATTGAATTAAAAATGGCGG
TGCTCAGTGGGATCTGATTGGTTGGATCAAGGAGTAAATGATGCTTTTTC
TCCGTACGATGGTCTAAAAGTTCTAACGGGAAAAATAAAGCTAGGTACAT
GTCAAGATGGACGGAAATGATGACCTAAACTGAAAATTGAACCTTTTTCT
AGAAGCAAGAAagacttatttatttttttactaaaaGCGACCTGGCTGTC
GCTCTTGCTTTCGAAATAAGAGAAGaacaaaattctttattttgaaaaaa
cggaGGAATGAAACACgctgtaaatattttttcatatacattgtacatat
tttttgtttttttgttgttgtttttaagaTAGAAAAGATAGGGTTTTAGG
GAAATTATAATTGCTGTAAAATAGTGTGCGGACGAATTTCTCAGAGGAAA
ATATTGTGATGGAGACCAAAGATTGACAATTTTTCCGTGGTCACACAATA
AAAAAGGCTACAGCCTGGTTTCCATACAAAGGTTTATTACTTTTGGGTAC
TTTTAAAGGTCATGATTAAAACAAGGATGCTTTTGTTGGGATCTATTGTC
AATGATCAAGTTTTGACAAGCTTTAGCCTGCTCCTGCAGCCAGTAGAAAA
AATACTTTCACAATCGTCTTTTATGCTGTTTTTggctataaaaacaattt
atgGGTCTTTTGATACTAAACATATCTCTGAGAATAAACCTCTTGAAATA
TCATTTTTGGTGAGGACGcatttttaacttattttgttttatcgcaatat
atattttgaaagagatattttttaaaagaaatcttttttttt Coding sequence (CDS) from alignment at sc0000110_pilon:413358..417199+ >MSTRG.13687.5.p1 ID=MSTRG.13687.5.p1|Name=MSTRG.13687.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2079bp|location=Sequence derived from alignment at sc0000110_pilon:413358..417199+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTACGATGAATCAAATCTTCTTTCTTTGTCTTCCAACACAATGGA
ACTTATTCATGCGTTGAGTGATTGTTTCTTTGGGCCAATGACTGCTAATT
GTCAATTGAAGAAAGGTGACCCATCGATCAATACAACAATTTTACCGACA
GTTCAGCCGAAAACCGAGTACGACCCGACATCACACGACATGCATGCGAC
AAACGAACAACTTGTACAACAAATGCACCATCAAACGACGACAAAACCAA
TTCGaaaaaaaccaagaattttattttcacaatCTCAAGTTATGGAGTTA
GAGAAGAAATTTAAAGAACAAAAATATCTATCAGCTTCCGAACGTGACCA
AATGGCATCAAAATTAAATCTAACACCAACACAGGTCAAAATTTGGTTCC
AAAACAAAAGATACAAGTGCAAGAAACAATCACAAGAATCCAGGCGTGGA
ATCCACCCACCGCCCTACGAATGGCCTTCACTCTTCAACCACCAACGTAA
CGTTCCTGTCTTAGTACAACCACCATCATGCCCGCCCCATTGTTATCGCC
CTTCGCCACCATCGGTTAATTTAAACTCGCCTATCCCGAGTGAAAGCTAT
ACCGGTTATTTCCCGGAAAGCTACACTGCACCACATTACAATAACAATGT
TTATTCAACGTCACCTTACAACCAATGGCCGTGCTACAAATGAATGAAGT
ACGATGAATCAAATCTTCTTTCTTTGTCTTCCAACACAATGGAACTTATT
CATGCGTTGAGTGATTGTTTCTTTGGGCCAATGACTGCTAATTGTCAATT
GAAGAAAGGTGACCCATCGATCAATACAACAATTTTACCGACAGTTCAGC
CGAAAACCGAGTACGACCCGACATCACACGACATGCATGCGACAAACGAA
CAACTTGTACAACAAATGCACCATCAAACGACGACAAAACCAATTCGaaa
aaaaccaagaattttattttcacaatCTCAAGTTATGGAGTTAGAGAAGA
AATTTAAAGAACAAAAATATCTATCAGCTTCCGAACGTGACCAAATGGCA
TCAAAATTAAATCTAACACCAACACAGGTCAAAATTTGGTTCCAAAACAA
AAGATACAAGTGCAAGAAACAATCACAAGAATCCAGGCGTGGAATCCACC
CACCGCCCTACGAATGGCCTTCACTCTTCAACCACCAACGTAACGTTCCT
GTCTTAGTACAACCACCATCATGCCCGCCCCATTGTTATCGCCCTTCGCC
ACCATCGGTTAATTTAAACTCGCCTATCCCGAGTGAAAGCTATACCGGTT
ATTTCCCGGAAAGCTACACTGCACCACATTACAATAACAATGTTTATTCA
ACGTCACCTTACAACCAATGGCCGTGCTACAAATGAATGAAGTACGATGA
ATCAAATCTTCTTTCTTTGTCTTCCAACACAATGGAACTTATTCATGCGT
TGAGTGATTGTTTCTTTGGGCCAATGACTGCTAATTGTCAATTGAAGAAA
GGTGACCCATCGATCAATACAACAATTTTACCGACAGTTCAGCCGAAAAC
CGAGTACGACCCGACATCACACGACATGCATGCGACAAACGAACAACTTG
TACAACAAATGCACCATCAAACGACGACAAAACCAATTCGaaaaaaacca
agaattttattttcacaatCTCAAGTTATGGAGTTAGAGAAGAAATTTAA
AGAACAAAAATATCTATCAGCTTCCGAACGTGACCAAATGGCATCAAAAT
TAAATCTAACACCAACACAGGTCAAAATTTGGTTCCAAAACAAAAGATAC
AAGTGCAAGAAACAATCACAAGAATCCAGGCGTGGAATCCACCCACCGCC
CTACGAATGGCCTTCACTCTTCAACCACCAACGTAACGTTCCTGTCTTAG
TACAACCACCATCATGCCCGCCCCATTGTTATCGCCCTTCGCCACCATCG
GTTAATTTAAACTCGCCTATCCCGAGTGAAAGCTATACCGGTTATTTCCC
GGAAAGCTACACTGCACCACATTACAATAACAATGTTTATTCAACGTCAC
CTTACAACCAATGGCCGTGCTACAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000110_pilon | genome | sc0000110_pilon:413358..417199 + |
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