MSTRG.13678.1.p1 (mRNA) -

Overview
NameMSTRG.13678.1.p1
Unique NameMSTRG.13678.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000110_pilon:261400..263409-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13678.1.p1 ID=MSTRG.13678.1.p1|Name=MSTRG.13678.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2010bp|location=Sequence derived from alignment at sc0000110_pilon:261400..263409- (Clytia hemisphaerica_ch_hm2_pilon)
CACCTTTTGGTTCCATCCACCCACGTGCACACGTTAAAGCTGATAGGTTG ATTTTAGGCGCACGTGCTACAGTTTATGGAGAGCCTGATGTTAATTATAG AGGACCTGCTATTGACAGATGTCTAATAACACGATACCAGGAGCAATCTG TATTGAGGGTTGATTATAAACACCTTGCTGGTGGAATTTATCTAAAGAGC TACAACGGTTTTGAAGTAAGTATGCAAACTTATGCTAGGGTAACTTTGTG TTAAAATCACACCCCCGTCTCTGACCAAATGAAAACGATTTCCTATTTCT ATTGGGTAGGTATTTAAAATTCTAATGTCTACAGCTGAAAGGGCAAAAGT AAACTTTAAAAATGTCCACCTAAGTCTACGACGATTTTGGCCAATTTCTC CAATCGATAGGGTGTTCCACCGAGTCTGCGCTACTACCGAGTTTATGTAT GTGTGTTTTTCAGCGATGGAGACGGTAAGGTTGTAATTTGAGTAGATCCT GAACAACTGAGAACGACGGTAAATCAGCGCTTTACCGTCCTCGATTTTGT GGGTAGTGATTTAGCCCTCATGGGGGGGAGGTTCTCTGATGTAGAGAATG TTCAAAAAAACTTATGAGCAGCGGGAGCTGCCGCTTATCTAGATAAACGA TCGACAATTTAACAATTGCAACTCTTGCTTATTTTAACTCTCTCTTATTT CCCCTTAGATTTTGACAACTGGCTCAATCGCATGGATTCCAACTGAAATC ATAACAGTCACAGAAGATAAACAAAGCGTGTTGGTAACTCTACCCAGTCC CCCAGACATTAAGATTCTTGGAGTGCGTTATGCTTGGGCTCATCATCCAT GCGAGTATAAAAGTTGTGCTGTCTATTCAGTTAATAATGACTTACCAAGT CCACAAGATATTTGCTTCATTCCCTAATTCATAATATGTACCACTGCAAA TTATGTAACTTTCATGACTTTTTGGGTTTTTTACGATTCTTCTTTTATAA GAACCAATAAATGATTTGGTGAGGCTTGCCAGTTCTTATTTTTTACCCTC TTTCGGTACTTTCTGCCCTAATTTTCCTAAAATTCTGTCTTGTCACTCTC AGCATTCTTCTTATAAAAAAAATGTAATTTACTTGGAGGGAGGCAATCTT GTAAGAATCCTGCATTAACTAAAAATATATAAAAAGAACGACGAATTTTA AAAAAATATGAGAATATTTCAATCTAGCAAATGTTGAATTTTAAGTTAGG GTTCCTTCGAAAAACCTTTTCTAGGCCTTTCTACTTAATTGTTGATTAGA AGCAGATTTCTCAATCAAAATAGGTGCATCATAGATTAAAATTTTTCATC AAAATTCGTAAGATCTATCAAACATGAGATTCCACTCAAAATTTTCCAAC TCTCTTTAGCAGGTGTGAACAACGAACATTTAGCGGATTGAATAAACACT GAAATTCATCATTTTCTCATTAAAAAGTCTTTATATATGAATTTATCGCC TCGATTGGGTCATTAAAATTTTTATGGTTTTGAGAGAAAATTTTATATCG AAATTGCAAAGTATACTTCTCATAAAGATATTTAGAATATTTCTATTGTT TTGTTGATTTTTATCCATATTTTTAAAACATATTCAATAACATTATATTT CAAAATTATCTATAAAATTGATATAAATATATTAAAGTTGCTAAGTTTCT TAGCTAGAATTATATTCAAAGATCATATTTTCAAGATCGTGCAGCTATAT ATAATTTCACTTTACAATTTCAGTTTTTAGCTTAATTGGTACCAGCTGGC ACACAACGTCGTTTCAACGTTTTTCTAATATTCACAACGTCCATATAACG TTAGATGAACGTTGAAACAACGCTGTGTGTCAGTTGGGGTATATTATAAA ATTCTAAAAATAAGTAAAGGTATAAAAAGTAAAAAAGCTAGGATTGGGGC TCAAAGAATGCACGTTTTTTATAAGAACATAAGGCTTCGACGGCCAAAAT GTTAAGAACA

Coding sequence (CDS) from alignment at sc0000110_pilon:261400..263409-

>MSTRG.13678.1.p1 ID=MSTRG.13678.1.p1|Name=MSTRG.13678.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=864bp|location=Sequence derived from alignment at sc0000110_pilon:261400..263409- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTGACAACTGGCTCAATCGCATGGATTCCAACTGAAATCATAACAGT
CACAGAAGATAAACAAAGCGTGTTGGTAACTCTACCCAGTCCCCCAGACA
TTAAGATTCTTGGAGTGCGTTATGCTTGGGCTCATCATCCATGCGAGTAT
AAAAGTTGTGCTGTCTATTCAGTTAATAATGACTTACCAAGTCCACAAGA
TATTTGCTTCATTCCCTAACCTTTTGGTTCCATCCACCCACGTGCACACG
TTAAAGCTGATAGGTTGATTTTAGGCGCACGTGCTACAGTTTATGGAGAG
CCTGATGTTAATTATAGAGGACCTGCTATTGACAGATGTCTAATAACACG
ATACCAGGAGCAATCTGTATTGAGGGTTGATTATAAACACCTTGCTGGTG
GAATTTATCTAAAGAGCTACAACGGTTTTGAAATTTTGACAACTGGCTCA
ATCGCATGGATTCCAACTGAAATCATAACAGTCACAGAAGATAAACAAAG
CGTGTTGGTAACTCTACCCAGTCCCCCAGACATTAAGATTCTTGGAGTGC
GTTATGCTTGGGCTCATCATCCATGCGAGTATAAAAGTTGTGCTGTCTAT
TCAGTTAATAATGACTTACCAAGTCCACAAGATATTTGCTTCATTCCCTA
ACCTTTTGGTTCCATCCACCCACGTGCACACGTTAAAGCTGATAGGTTGA
TTTTAGGCGCACGTGCTACAGTTTATGGAGAGCCTGATGTTAATTATAGA
GGACCTGCTATTGACAGATGTCTAATAACACGATACCAGGAGCAATCTGT
ATTGAGGGTTGATTATAAACACCTTGCTGGTGGAATTTATCTAAAGAGCT
ACAACGGTTTTGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13678MSTRG.13678Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13678.1.p1.exon2MSTRG.13678.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13678.1.p1.exon1MSTRG.13678.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13678.1.p1MSTRG.13678.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000110_pilongenomesc0000110_pilon:261400..263409 -