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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000110_pilon:107230..113114+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13668.6.p1 ID=MSTRG.13668.6.p1|Name=MSTRG.13668.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5885bp|location=Sequence derived from alignment at sc0000110_pilon:107230..113114+ (Clytia hemisphaerica_ch_hm2_pilon)
agtgtttaaataatataaaaaattagaacataaatttttcaaaacaataa
ccATGAGCTCAAAACAGAGTAAGTATCCAAGTATCTATagttactttaag
ggcagaaagtttcgcgaagtcaaaaagtcgcgaaatttagcgaatttaag
tttcgcgaattatggttttcgcgaattcatataaaatttaccttttttgg
taacaaaaactcataaaacacgcaaaaatttagcaaacagtgaaaaactg
agtagtaaagtttatttttcgcaaaaaaaactttcgtggttttcaggttt
aatttcttacctggcagaaactttcgcgaaaaaggatcaaaatcgtgaaa
gtttctgcccgcgaaagtttctgcccttaaagtaattcgacttttaaaat
acttaattttcattGATCATTCTAGACAGCAGTTTTAAGCACAAGGAAAT
TTGGAATCTAGAATTTCGTAGCTCGCAATTCGCTCATGTGTGCATCGTTC
TTTGGTATACAGACACAGATGTATAGTCTTTCCAATAAAGATCAATTTTC
TATTCCCtataatgaaaaataatgatgATACATATAATTATGCTATacgt
tgtttttgttttttcggaTTTGCGGCCACCAATGCTAAAGCCCTAAAGTA
ATGGACCAATTTCCCATCAAAAAgaaatgatagtcggcctttgatgtgcc
gcatccccagtcaACTACCCTTGCGCATAAACCTTAAAATATTCCGAAAG
CGAGGGCTTCCCACAGCAAAAATCCTCTGGGTTATCTGCATCTGGGtgga
gaaaaattttctaagaatAATTAGGCTCATAGACTCCTTAAGAAGAATTT
CAGAACGAAGCTGACCCCGCATTGCCTCAACaaaaaaaGTTTGTCGgatc
ttagaaaaaaagagtgtagtacaaatttgaattgttttttttttatcatg
atTTTTGAACAGATCTTCCAACACAATGTTCAAGCTCAACAGTCACAATA
ACAACAActaccaaaaatctttttcgtatGTAAATTATTCCAGTGCCTTT
CCCTGTATAGTTTAAATAATTATCATTTGTCAAATGCTTTCCAAAAAATA
AAGCGTACCTGTgattaggctgctggcatccactaacggattgcTGCTCC
TTATATACTACCTGCAGTTGAAAAATCGCTTATTTTCCTTCCAAACAAGA
GTTGTAGCACGCCTTTTAACTgcatttctattatttttttagCTGGAGTG
GGTCAAATTCTAAGCACAGGTATAAATTTTGACTATAatatttaaaagtg
aaaaaatcaggGGACATTTACTTTGACGATGATGCTATACacgatttttt
tagaatttcgaCCGGGACTTAAGTGGGATAAGTGACTATCATTCCTCATC
CTACAAAACCTTTGCTTCAATATTTAATCCCCGGCAGAATTTATGTGTTG
ATACACTATATTGAGCAAAAGCCATACTGAAAACTAAAGAccataatatt
ttatttatgaGTAATACCGGGTGACtcacgaaaaagtataagagtttgga
gggtaactgtgtccgaaaaaaattgaattttaactaaattcttttttcat
ggtaaagaggaaaggcaaacttaaattttgatgtatcattttttaatttt
ggaaaagtagttatcgagatatggaggtataaagtcaaaagtcattataa
aaacagtATCTCGAtaactcttatactttttcgtgggtcacccggtagat
tTCAAATGATTTTCTTGTCGACTTAGATGCTTTCAAATACTCTGTCGGCT
TTGAATTGTTGGCTTCGAGGCATAGTGCTGACAGTTCCATTTTTTCACCA
TGCTTTTGctcattcattttttttaggGTCAGAAAAAGAAGAATCAAGCC
AAGAGAATGCAAAAAATAGTAAAGGTATACTAGTATACCTATATTAACAC
ATTCAATTGTTAAAACTGGTTGAAAACAAAATCTTCTGAACTTCTTTTCT
AAGAACCTACTTTCTCATAGTCTCCTCTAATATAACGAATAAAGTTTGGC
TCAAAAATATGCGAACACCGTTGTACACCGTTcgaaagatattttcaagg
aGGACACTCTAAaggattaatttttttgaaaacttgaaaattgaaaaaga
aaaataaagatgaaaaaaagaagattctTCCGTTTCAAATATCATGACAT
TAATTTTATAAGGATTATTGGAACTTTACAAACTTCGAAAATGTGTTCTA
ATTTTTCGTGTTAGATAAAAAGTTTGAAGTAGCtcattttaactgttttt
ggtcatttttggccgTCTTATGCCCACTTTAAAGACTTATTTTCCAGCTG
AACAATCAACTGACGAAACGCGCAATCTTGTCTGGTTTAAAAACTACAGT
gctttttcaaatcaatcactATGTTTATTATCGATACAGACTTCGCCAAT
AAACTGTCAATCATTAAAAAGCGGTTTTGATTCTTTAAAAATTCATATTA
CTCGTGAAATAGAACTTCTTTTGTTAAATCGACTGATCTCTGAATAGTTG
ACTGGATTGTGCTTTCCATATTAAAGGAAGCGTGTCTTGTtttcaataca
caaatttcctattagcagattcatgtaaaaacgTCACGAAAAAATCAAAG
AGTAAAGTTATGATTGGCTGAGACATGATTACCGCATGCTTTCGAcactt
aaaagaaaaaatatcttaTCTGTTCAGAGCtttacatgttgtttttttta
aataagaatatatttgtaagaatgtccatgatgaaaatggccaaaaaaat
aagaatatgctaagaatatcactatcatggaattttgctactcaagctaa
gaatgctatttttagagcgttttcaattataaattgtcatcAATTacccc
ccaagtaaggctcacttcttttacaaaaatgccattttatgcttgagact
tatgtactaaatgtttaatctagtctgaattaggaacCTAACCTaggaat
gctgtaagaatattttaggatgattttcccaaaaaagttaagaatatcca
tgatgaaacaccattcttataaaaaaagcgtttactcgacgtttttttgT
GACTTTTCTCCCATGAATCTGCTACTGTAATAGGGAATTCGTGTATCCCG
ATCGCCAACAGCGCAACCAGTAGGTTTTGAAACTCGAACTTTCCAGAATC
TAAGTATGTAAAGTCTCATGTAAAAGTGATTTCAGTTTTTCGATTGACTC
TTTTGCAGGCCCTAACAAGGATCGCATTTATTTGAGACTAtacatgaaaa
tcaaaaaaattaaaaaaatcattttgtaaaaagctgtataatatttgaaa
aagctcactttgttttgtttttcttttcctgtgTATAGGGTAAGTCAATT
AATGATTTTGTTGCGATACCTACATACGTAAAGCTTTAGCAAGGGTTGCC
ACTAGCAATTCATTGGTTTATTTTGTATCCAAACGCTAAAAGGACTCTAC
TCTTGAGCTAAGGATTGCCGCCAAAATGTCAGTAATACTTACACAAGTGT
CATCCAATTTTGTTCTAAAACATCATCAAAATGACAGGGTGTTTAGAACT
TTAAATTGTCGTATTTCCATACGTTTTTGAGTATGAGACTTGTTGTAGTA
CtttttttGCTCGGAATTTCATACACTATCCGATGGTTATCCACCGTTTT
AGTTGAATACGAAAGAATTTTGTGTGGTTGTGTtctagaaaagatgtcac
ggatactaccgtcaactgctctaacttgggacaattggtcgaaacatggt
actggttgatatctggtctgtatttttcacttactgttaaatctctttga
caacaaatttgttttggtaactccaccaagtttatcaatcatacttatTC
GTTCCTCTTAGAATGCACAGACACTCGTGTGTGTTCCAcaacggattttt
ttcatatttcgatttaaaagcctactcggtgcgaaagaaaaatcgtgtat
tttttaatacgccgtgcattaactcaaatcaaatgactttggaggttcgg
tgaaatgctggccgaattgccgtcccatgttttgtcagatagtcccaagt
tagagcagttgacggtgaGTGTTTTCCCTCTAGTATAAATACACAACACT
TAATTTATTTGATGAACTATTCTTTTCAGTTGAGGTAGCCACACAAGGAG
AAGACAGGATATTGAATACATTGAAAAAGAGCGAAAAGGAGAAATTGCAA
GCTTGTTTGGATAAAGAAGGAAGTCATCTAAAAAACTGGAGGCAAGTAGT
GgataaaattttcgaaaatgacGAAGATAATAGTAAAGCAATTGAAATAA
AAGCTACTATTGAAAACATACGGTTTGGTGGGGGTGCTGCTGGAGGGTTT
TTGAAGAAGCTAGAACAGAAGTTGCCTGATCTTACGGTTGGTACTCTAAA
TGAAATATGTAAAGAGGAGGGCAGGAATGATATTGTTAAAGATTTGAAAC
GTTTTAAAGAAcagcaaaaattgtttgaagttttggaTGCAGACGATATA
AGTAAGTTGAATGTTAAAATGGATGATGATGAATTTTGTTTGATTGTAGC
GGAATCCGAAATATTGGAGAAAGTGGCACACCACTTCGGCATCAAGGGTA
CTTTGTTCTCTCAACATGAAAAAGATAATATTAAAGCCATTGGTCCGGGA
AAATTTCAAAGCTGCACCGTGAGTTTATTGGATATTTTGAATAGAGAAAG
ATCAGATATGACTGTAAAAGAATTAGCTAAAATTTGTGAAGCGTTACGAA
TCAACGATGCAAAAGATGCTTTGCTTAAATTGCTTCATAAATAACATACT
GTTTATGATTTTATGTGTTTATAGTACATTAGTATTTCTTACATGCACCC
ACACTGAGATAACAAAATTTGTATACCTCTGTTAGGGATAAcgtaaaata
attttgaaatacaccaaaccgtatacacgcttttttttataaagaatatC
CTCtctaagaatatcagggtgaaaattggccaaatcgtaagaatacccta
agaatattATAGAGcgagtttcacagaatttgataagaatacaatcattt
tgtatttggttaacagaaaaaactgcttctcTTGTTAGACTTAAGATTTA
AACTTTGATGTAGAAGTGTAATTTTTGCTCCTAATGTGCACTCAAAAGTC
CCAAACTGTCAAATTGATCGCAGTGATGCAGAAAAAGTTTTAGTGAAATT
GCTTTAGCGAATAactatttatgatttttagtgCTGTCCTCATAACTCGg
acgaatgtctccttaactcgaacaagtcgTCTTATCccttaaagttttta
ttttacataagtgttcccgtttcatatcagacacatatcatgacagtgtc
tgcctattgttatattatgctgatataaacaagaaatgtttttctcttcc
tctttctgatcatcTTGTTCCACATGTCATCCGtgccaatccaatgtgaa
aacgcttgtaaattaaaactgATGATTAAGCAAGtgatatcactcttatc
taaaaacaaaacctttaacatcccTTACCTGTCTTAATATTTGCGTCTCC
CTCTTACGGGTCCGAGTTTTGAAGACTTCACTGTGATacacataaatatt
ttttacatgcaccactttatatttagcttttaccaattgttattttatga
atttttatcattttgtcagccaaagaaaaatgtttgacatttttatgatt
tcttttttagggcgggggtgggggttggtaggtggggtaaaatttttttt
ttttttttttttttttttttttttttttttttttttttttttttttttat
tttttttttttttttaactgaaaaaggaaactttt Coding sequence (CDS) from alignment at sc0000110_pilon:107230..113114+ >MSTRG.13668.6.p1 ID=MSTRG.13668.6.p1|Name=MSTRG.13668.6.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3024bp|location=Sequence derived from alignment at sc0000110_pilon:107230..113114+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCTCAAAACAGACTGGAGTGGGTCAAATTCTAAGCACAGgGTCAGA
AAAAGAAGAATCAAGCCAAGAGAATGCAAAAAATAGTAAAGTTGAGGTAG
CCACACAAGGAGAAGACAGGATATTGAATACATTGAAAAAGAGCGAAAAG
GAGAAATTGCAAGCTTGTTTGGATAAAGAAGGAAGTCATCTAAAAAACTG
GAGGCAAGTAGTGgataaaattttcgaaaatgacGAAGATAATAGTAAAG
CAATTGAAATAAAAGCTACTATTGAAAACATACGGTTTGGTGGGGGTGCT
GCTGGAGGGTTTTTGAAGAAGCTAGAACAGAAGTTGCCTGATCTTACGGT
TGGTACTCTAAATGAAATATGTAAAGAGGAGGGCAGGAATGATATTGTTA
AAGATTTGAAACGTTTTAAAGAAcagcaaaaattgtttgaagttttggaT
GCAGACGATATAAGTAAGTTGAATGTTAAAATGGATGATGATGAATTTTG
TTTGATTGTAGCGGAATCCGAAATATTGGAGAAAGTGGCACACCACTTCG
GCATCAAGGGTACTTTGTTCTCTCAACATGAAAAAGATAATATTAAAGCC
ATTGGTCCGGGAAAATTTCAAAGCTGCACCGTGAGTTTATTGGATATTTT
GAATAGAGAAAGATCAGATATGACTGTAAAAGAATTAGCTAAAATTTGTG
AAGCGTTACGAATCAACGATGCAAAAGATGCTTTGCTTAAATTGCTTCAT
AAATAAATGAGCTCAAAACAGACTGGAGTGGGTCAAATTCTAAGCACAGg
GTCAGAAAAAGAAGAATCAAGCCAAGAGAATGCAAAAAATAGTAAAGTTG
AGGTAGCCACACAAGGAGAAGACAGGATATTGAATACATTGAAAAAGAGC
GAAAAGGAGAAATTGCAAGCTTGTTTGGATAAAGAAGGAAGTCATCTAAA
AAACTGGAGGCAAGTAGTGgataaaattttcgaaaatgacGAAGATAATA
GTAAAGCAATTGAAATAAAAGCTACTATTGAAAACATACGGTTTGGTGGG
GGTGCTGCTGGAGGGTTTTTGAAGAAGCTAGAACAGAAGTTGCCTGATCT
TACGGTTGGTACTCTAAATGAAATATGTAAAGAGGAGGGCAGGAATGATA
TTGTTAAAGATTTGAAACGTTTTAAAGAAcagcaaaaattgtttgaagtt
ttggaTGCAGACGATATAAGTAAGTTGAATGTTAAAATGGATGATGATGA
ATTTTGTTTGATTGTAGCGGAATCCGAAATATTGGAGAAAGTGGCACACC
ACTTCGGCATCAAGGGTACTTTGTTCTCTCAACATGAAAAAGATAATATT
AAAGCCATTGGTCCGGGAAAATTTCAAAGCTGCACCGTGAGTTTATTGGA
TATTTTGAATAGAGAAAGATCAGATATGACTGTAAAAGAATTAGCTAAAA
TTTGTGAAGCGTTACGAATCAACGATGCAAAAGATGCTTTGCTTAAATTG
CTTCATAAATAAATGAGCTCAAAACAGACTGGAGTGGGTCAAATTCTAAG
CACAGgGTCAGAAAAAGAAGAATCAAGCCAAGAGAATGCAAAAAATAGTA
AAGTTGAGGTAGCCACACAAGGAGAAGACAGGATATTGAATACATTGAAA
AAGAGCGAAAAGGAGAAATTGCAAGCTTGTTTGGATAAAGAAGGAAGTCA
TCTAAAAAACTGGAGGCAAGTAGTGgataaaattttcgaaaatgacGAAG
ATAATAGTAAAGCAATTGAAATAAAAGCTACTATTGAAAACATACGGTTT
GGTGGGGGTGCTGCTGGAGGGTTTTTGAAGAAGCTAGAACAGAAGTTGCC
TGATCTTACGGTTGGTACTCTAAATGAAATATGTAAAGAGGAGGGCAGGA
ATGATATTGTTAAAGATTTGAAACGTTTTAAAGAAcagcaaaaattgttt
gaagttttggaTGCAGACGATATAAGTAAGTTGAATGTTAAAATGGATGA
TGATGAATTTTGTTTGATTGTAGCGGAATCCGAAATATTGGAGAAAGTGG
CACACCACTTCGGCATCAAGGGTACTTTGTTCTCTCAACATGAAAAAGAT
AATATTAAAGCCATTGGTCCGGGAAAATTTCAAAGCTGCACCGTGAGTTT
ATTGGATATTTTGAATAGAGAAAGATCAGATATGACTGTAAAAGAATTAG
CTAAAATTTGTGAAGCGTTACGAATCAACGATGCAAAAGATGCTTTGCTT
AAATTGCTTCATAAATAAATGAGCTCAAAACAGACTGGAGTGGGTCAAAT
TCTAAGCACAGgGTCAGAAAAAGAAGAATCAAGCCAAGAGAATGCAAAAA
ATAGTAAAGTTGAGGTAGCCACACAAGGAGAAGACAGGATATTGAATACA
TTGAAAAAGAGCGAAAAGGAGAAATTGCAAGCTTGTTTGGATAAAGAAGG
AAGTCATCTAAAAAACTGGAGGCAAGTAGTGgataaaattttcgaaaatg
acGAAGATAATAGTAAAGCAATTGAAATAAAAGCTACTATTGAAAACATA
CGGTTTGGTGGGGGTGCTGCTGGAGGGTTTTTGAAGAAGCTAGAACAGAA
GTTGCCTGATCTTACGGTTGGTACTCTAAATGAAATATGTAAAGAGGAGG
GCAGGAATGATATTGTTAAAGATTTGAAACGTTTTAAAGAAcagcaaaaa
ttgtttgaagttttggaTGCAGACGATATAAGTAAGTTGAATGTTAAAAT
GGATGATGATGAATTTTGTTTGATTGTAGCGGAATCCGAAATATTGGAGA
AAGTGGCACACCACTTCGGCATCAAGGGTACTTTGTTCTCTCAACATGAA
AAAGATAATATTAAAGCCATTGGTCCGGGAAAATTTCAAAGCTGCACCGT
GAGTTTATTGGATATTTTGAATAGAGAAAGATCAGATATGACTGTAAAAG
AATTAGCTAAAATTTGTGAAGCGTTACGAATCAACGATGCAAAAGATGCT
TTGCTTAAATTGCTTCATAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000110_pilon | genome | sc0000110_pilon:107230..113114 + |
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