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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000109_pilon:897514..902827+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13641.1.p2 ID=MSTRG.13641.1.p2|Name=MSTRG.13641.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5314bp|location=Sequence derived from alignment at sc0000109_pilon:897514..902827+ (Clytia hemisphaerica_ch_hm2_pilon)
CACctaaaattacgaaaattttAAGAGCGACGCGGCGTTTAGTTGAGGAA
ATACAGTACCTAACTTAGGAGTTTACTAGGCTGCTGGCACCCATTACAGT
AACGGATTCGATTTGAACGATTTGATAACGATTAGAATctagatcaaaac
attcgaaagagaaTTCGTCACTGTAATgtcttcaatttttctcaatcgaa
tgcGAGAAGACAGGATACTGTCTATATCGCACCTTGACGTCTTTTGACCA
ATTAAATCGCTAGAATCTTACTGACGCGCTGTCTTAATGTTTCATCTTTA
ATCTGCTCTTCCGCAATCGATTGAACTCATCGTTAATCTATaagagaaaa
tatttatatGATTCAGTACTTTGCCCCTACTCCGTACTTAGATTAGACTC
AATGGACCCAGCCAGACAGGCTTAAAAGCGTTATGAAAAAGGaagcccga
acatggcccgaatgactcgggtcatgttcgggccaaaagaattgataggg
tctctcggcccgaagatggcccgaagaggcccgagggTCGTTATTTAACT
TGAGTGTGAATAGGATCTTTAGCTACACAAGGTCAATACAATTTTGAACA
ACCACTCCATAAAATAAAGTTGGTAACATATACCGCCAACCtgttctaac
ttgggacaattgatcgaaacatgggactgtggGACATGGGACATGGGACA
TGGGACATACGACCCTGTCTATGACCCATGTCTATGTGGTCTTGTGTGGC
ATACAGTTTCTACTACTTTGTCGGTCGCTTTGTCATAATTTGGAAAATTC
TGTGATATGATCCGGATGGTGTTGGGATaactgaagaaaatgaaaatata
ataaaactGTAAGTCATATGAGCAGTAGTAGTAAAAAGACGTGATCTGGA
CGTGACTATGTTTGTTCATTGGGCGAAAGGGGGTGAAGTTTTGGACCTCG
GTAAgatgtttgaaaagaaaactttaacgactaaaaaactaattaacaTG
CTTTCAACAAAGATATCCAGGTCTttcattttagggctatgcatgttagc
ctccactgatgcaagttacccaatctcacggtagagCAAAACTGAATTCT
TATTTCTGTACCGCGATTTTGCATCTTTACTGTTTTGAAAggcattttta
tcttttaagcAATTAAAGGGTTTCATAATTTTAGCTAAAATCAAGTTTCA
CTTAATTCCCCTCAGCTTTTAGATGAAAATGCCTGTTTTGgcagagagaa
aaaaaatgaccAAAGAGGAGCTTGAAGCAATAGCTCCATTTATTTTGGAA
ATGCGTCGAAGAGAGCAAACACAGGAAGCTGAGCTGTTACAACACATACA
AAACATTGATCAGAAAGATGATTTCAAAGTAGAGGAGGCGGAAGAGGAGG
ACCATTTTCAGAGACAAGAGatgataaaattttttgaagatcaCTTGAAC
ACTGTACGTCAACACATTGATGAGCAAGAAACAAATTTAACAAATCTGCA
ACAAGAAAAACTTGATCTTTtcgagaatttcaaaaaatctttacaaatca
aacacaaacaacaacttgaacaacaaaaacaacagcaaccaaaaTGAAAT
GTTCTCTTcattattgatttttctttagttttgtaaataatcattcagta
tttatttcacccattttttatttcttttatatcCTCAGTATAACATAGTA
AAACAATTGATAATTATTGAGAAAATTGAGTttactttttaataatttta
ttcaTCTGTCGCCTTGAGTTATGAAATAGAAATGCAACCTGGGTAATATT
ACATAATTGGTGTCTGCAGAGAAATGGACAAAACCTTTTAAACctaatat
gaaaaaaatgtcttttcgaGTTCTAATAaagcttttttccaaaattctca
aatatttgtttaaatttttctagtgaagtaaaagaaaatcaaatacaATG
CCTTTCACAGAAGAGCAATTAAAAGGGTTTCTGGAAAACCTTTTGAAAgg
tcaaggaaagattgaaaatgttgaatttaTCCATTCAACCTCTTTGATAG
CCAGCAGTTCAAAAGGTGTAATAATTCAATATGCTAACGGCACAACCAAA
AAGCTTCATTTAAAGCTTTGTGAAGATGGTACAACTCCTGGATTCTTAAA
TgacaaattgaaaatatttgaacgaGAAGAATTCTTTTACAGCAGTCTCT
TACCAGAAATGatcaaatttcagaaagaaaataaaacagaTGAGAAATTA
AACCATGAAAACAGTATCAAGTCATTGTTCTTCCCATACCATGGTAACCA
TCATGTTGAAGGGACCGGTATTGTTCTTGTTTTGGACCGTTTCTCACCAG
AAGAATATTTTGTGACCAAACCTGAGGAGTTCCACACTTTACAGCAAATA
CATCATTGTATGAAGAAGATAGCAGCTTTTCATGCTGTATCATACtcaat
gaaaatcaagaaagtTGTTGATTGGAATAATTACAGCCCATACCTCCCTG
ATGTTCTTTTCCATCCTTCAACTAAAgatgtctcaaaaacctatttCAGT
AGCATCTTTGCAAGTAATTTGAAAATCTTACGTGCCATCAAGGAGGAAAT
TAAAAATGGAAATCAACTGGTTGAAGACTGTATTCTGAGTTTCAATTCAT
TATCTGCTGGTATATTGGACAGAATTGAGAAGTTGATACCAATGTTGCCT
AAAATTCTAACCAAAACTCTGGAATGCCCTGATGAATTACTTATTGTGAC
CCATGGAGATTTTCATATGTGGAATATTGCATTTGCTAACAAAGGTGAAA
TGGAAGCCAAATTCTTTGACTTCCAAATGTTACGTACAACATCAGGATTG
GTTGATGTACACCATTTATTATCACAAGTCTGCACGCCTGCTACAAGGAA
TCAGCATTTGTACAAATTTTTAAACACATATCACAAGTCTTTTAAACAGG
AGTGTTTGGATCTAGGCTTGGAGGAATCACAGATTGATTACTCTTTAGAG
GCGATAAATAAAGAGTATGTCATGCGTTCACCTTGGGGTTTTGTGTTTGG
TTTCTGTTTCATTTTACCAAGATTCTTATCAAGCAAACAGCTATCACAAG
AGTTTTATGccaaattaaatgactttgaaagCAGTAGCAGCATTGTGGAA
TGGATTTCTAAAAATGCAAGTCCAAATGTGTGGAGTGTTTTGGATATGTA
TGTGGACATGGTGCAGATAGATGATGATCTGGGTACCTTAGAAATCATGG
AGAAATATACTCAATAGCCTCTGGCTCtttttaagttgttttcaaattag
ctacaatttgttttttaaaagcttaccagattgatttttttACCAGAAAG
ACATTAGACAAAATGCATTTTATAGTAGGTGTCTATTTTCCTAATTAGAA
GTTGAGGTTtggccaaaatcaaaatttattaggACTCCGCTCTGttcttt
attgattttgtaagttttaagtgttaaaaatgttaaaaaaaaggacTTTT
TCGTATACAAAGCAATCTAAGATGAAATAAACTTCTTCTGattgtttatt
gaaatttcaaaccaCCACcattagcttgaaatattgataCCAAATCTAAT
CAGCTGCTCGTTTGAAATCTACTTAGATTACGAATTAGTTTTTAACttta
agatgaaaataaaacttGTGATACAAATCCATATTCATGTTATTAGTTGT
AATACAAAAACGAAACGTCCAAAATATATTTAGTTTCTGGAGATTAGATT
AGCtttttatttggacttgcatttgcatatttttacagtggaatatattt
ttaaaattttgatttaagaaataaaattatttttatgcagttttaatGTC
TCCTTGATTCACTTTTATCAACCTTTCAATGTCATATTCTGCTTTTTAAT
TGTCTTATTAAAATCAGATCGTATTCAGTTATTGTTATCAATCTTCACTG
AAATGCCAGCAAGatttcattctttgtccataaaatataaatttcaataa
ttttaatttccccaatttttaaaatttacacTTGGAACACagttattttc
aatttagaaCTAGAAGCATAATGCAAAAGTTTCTCTTTTCTGTATTTCAG
TTTTACTTAATCATAGCACGTTGATTTATTTACAGATTAAAAAAGAAGCA
TAATAATGACATCGACATTCCAATGGCCTTGGCAATACAACTTTCCACCt
ttttttACCATACAACCAAACAATGCCACACAGGCTAAACAAATAGAAGC
ATGGCGAGCCTTGATATTGAGCTACTACAAACACAACAAAGAGTACAGGC
TTGATGTGACCGAAGCACATAACtctgttttgtttacaaatgaaAGCATC
AAACGAAAGCTTGCCATGGAGGATATAGTGATGGTTTTGGACACTCTGGC
GAAAACTGGACATGTTGAATGGGATaatgataaagaaaaacaaaggtgTT
TTGTGATGTGGCGCACACCTGATGAATGGGGGGAGCAAATTTACAAATGG
ATAGGGGATAATGGTATGTTGGATACAGTTTGTACTTTATATGAACTTCA
TTCTGGTGATGATACTACCAATGAGGAGTTTCATGGGATTGATATTAATG
TGTTGTTAAAAGCGTTAGAAGCTCTTGAACGACGTGGTAAAGCTCAAGTG
TTTACAGCACAGGATCCTTCAGAAGTTGGTGTCAAGTTCTTTGCATGAGG
GAGAGttatgtttctttttaaattcaatttagGAATAAGATTCTGGAATC
Gaacttcaaattcaacaaaattctacaaaatttgaagaatcttgccttta
atttgttatttttgaaattcattcCCGTCTTAGACAAAAAACTTAGCTTT
GACCGTGTTTATTGAAGCTCGACGAATTTAAAGCACGGTGTACAAGCTCT
TCTTAAGCAATGggccatttcattttatatccatacatgggGGTGGATGA
ACATATCCAGATGGTTATTCCAGGggatcttttttcatttttccgagggg
gtaaaaagttattctaaaattttacggggtaaaagactgatttcagtTTG
TCCACCTTCAATTTAAGGTAAGAAAAGAATCTTTCCAATGgtacttttgc
aaatttcgcgcttttccagggggtatcgacacattttgacttaaaaaggt
ttgttcacccccctgtatggttttttaatgaaaaagccCAATACCTTTCC
TTTAGGACTATGGACttttttataattggcaaaattatttattaaatttt
ttgtaataatcttttCTGTTATCTTAGTAAAAATTATCCGATGAAGAAAC
TGCTCTCTTTTCTA Coding sequence (CDS) from alignment at sc0000109_pilon:897514..902827+ >MSTRG.13641.1.p2 ID=MSTRG.13641.1.p2|Name=MSTRG.13641.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=543bp|location=Sequence derived from alignment at sc0000109_pilon:897514..902827+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACATCGACATTCCAATGGCCTTGGCAATACAACTTTCCACCtttttt
tACCATACAACCAAACAATGCCACACAGGCTAAACAAATAGAAGCATGGC
GAGCCTTGATATTGAGCTACTACAAACACAACAAAGAGTACAGGCTTGAT
GTGACCGAAGCACATAACtctgttttgtttacaaatgaaAGCATCAAACG
AAAGCTTGCCATGGAGGATATAGTGATGGTTTTGGACACTCTGGCGAAAA
CTGGACATGTTGAATGGGATaatgataaagaaaaacaaaggtgTTTTGTG
ATGTGGCGCACACCTGATGAATGGGGGGAGCAAATTTACAAATGGATAGG
GGATAATGGTATGTTGGATACAGTTTGTACTTTATATGAACTTCATTCTG
GTGATGATACTACCAATGAGGAGTTTCATGGGATTGATATTAATGTGTTG
TTAAAAGCGTTAGAAGCTCTTGAACGACGTGGTAAAGCTCAAGTGTTTAC
AGCACAGGATCCTTCAGAAGTTGGTGTCAAGTTCTTTGCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109_pilon | genome | sc0000109_pilon:897514..902827 + |
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