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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000109_pilon:754379..759478+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13631.1.p1 ID=MSTRG.13631.1.p1|Name=MSTRG.13631.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5100bp|location=Sequence derived from alignment at sc0000109_pilon:754379..759478+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGGGTGTTTGGTTGTCAATTAAAACCAGGTGTTTCAAGTCAGAATTTAT
gttatttttcaggaaaaatatataaaaacgAAAACTCATTTGGGAGTATA
AAACAAGCTGTTATTCAAATTCACAACACACGGTGTATTAGAACACAATG
TTATGCGACGATGTTCAATTATATCTTGTCCTCTTTTGTGGACTATTGTT
ATTGTTGAAACAAAAGCTTTGCCCCCGGATGAAAACACCTGCAGCATACA
GTATAAATTCAATCACTCACCCATCATGCAATCATCAGAAACTTGAAGAA
CAAGAAGACAATCAGTCATCTAAATATCTTGATTACCTTGGACAACTCAC
TCTTGTTAGTAAACTCAACTTTATccaagaaattttcacagtcaaATCTC
AGAGTAAgttatacttttttcattttttaacttttacagttttAGCCTAG
TTAGACACTGTTCTGGTAAAACACCCTGCCCTTTACTTACCTTTACACCA
CAATATCTGAATATAACACTTTACCACTTTTGATCTTTCAACATCACTAA
GTTTATAACTTACAAAAGGgtatactcgtattacattatagCTTTTGGAA
AAAGTATAGCAACGTTGACCAGAGGGGTCAGTACTAAGATCTAGTACATC
ATGATGTTTAGTGACGTGGGTGGTATATTCAAAGaacattaaaatcattt
tagtaccgtaacttggtctaatagaccttttttcaaagaggccaccctgt
tgaataattatgtagtccagcagaaaaacaatgataaaaccatgcataat
tattacaatatgcatgatacagtaactatgcatggctctatcattgtttt
tatggctggactaaataattattcaacaggacgtcctctttgaaaaaagg
tctatgtcgacacccctcctctaattccgacaccctttttattagctgat
agaaagattgaaactgtttttctttgcttgtgGTCACATAGTAATAATCC
TTTtccaatcagtgattcaagctttcatattattcctgtctctaaagaag
ggtgtcggaattagacgagggatgtcgatattagaccaacttacggtact
atGGGGTACTACACGTTCtgacgttgttttttttattagaacatccacaa
tgtttgaaattttcagatttttaccattttttgagcatttttgcccattt
ttctaagatacCGGCTGTATTAGAGTCggtaaaaccttaaaatgttctta
acttttccaTAACATTtcggccattgaagccttatgttcttatatagttt
gttcttataaaaaaatgtgtaaaatacTTAAAAGGGTGATTTCCagtggg
cacccccccccccccttccagGATTCTGGGGAGAGGttgacaattttcaa
attttttaaatcgggTGGGGGTTGAGTTGACGAaaaatttcaggtggggg
taaccctatacAAGTGGGGGTGGAAATTTTCTCAGTTGGGGGTTGTGGAG
tttttttGAGTGTATCTTTCATTTGTTGTGAGAAtctagttgaaaaaaaa
attgaaaaaacaatccaagaaaaaaactaaaaaatatttattttttgtcc
tCCAATTTCTTCCTCATATTCATCAGGGGACTTCACTGGTATTTTGAGCG
TTCGCAGGCAAAATTCTTTCTCCTTTCTTATCTTTTCTCTTATATTACTt
aagaaaagaaagtaaaataacTTTGATAACTCTGATTTTTAATATTCTAC
AGTCTGTCCTGGgtgtataaaataaaattctaaaaatcttaaaatgaaat
gaaatgaaaaataatcagTTCTTGGTATAAAAGAAGATGAATGTAATGCT
TAAGAAGATTCAAATTCTAGAATTTGTCATAAAATCATAGTAATTCTACG
AGATATCAAAGCAAATCTCctaaaaataacatcaaaatgcaAGAATGCCA
AAAATATTGCTCACTCTCCAACCTGCTCCAACTACCATCTATTATTTGCA
ACACTTTGATTTCAATTCTCAATTTTGGTTACACAGAGTAGATCATTTTT
CTCACAACTGAAATGCACTTCTAATCTGCCTCACTGTTGTAAAAATCCTT
TCTGATAAAAATTGGGATATTGTACAAGTTACCTACAGCACACCTCCTAG
GCTAAATTTATCATATCTAATTTCATAcatttgtttactttgaaaattca
aactttATCCTTAAAAGGTCAAAGAGCCCATTAAAAGGTCAAAATTCTGA
ggaaattcttttttcgacttttataatttcatgcttttatatTGTATTAC
ACTGTCATGTTGGGAAATTGCGAGGCAACCCTTCTATGTGAATTGAAAGT
CCTGTTGAAAGATCTGTACAACCTGAAATAACAGGGTTTCATTTGAGCTC
TCTTGCACAATAGCTTTAGTTTCGAAAACTATAAAAGGTAGAAAATTTCT
GATAAAATCTCACATAAAAAATTCACTTGGTTTAAAAGTTGAAAGAGAAA
AGAGGAAAGGTAGACTTGACTTATCTAGAACATCTTTGAAGGTGTGTAca
tgttttaaaaatatctgCATAGCTTTGAGTATTTCACCTCGATAAGTTTT
TGTATAAACTCTTTGGAATAGTCTTAAATTTTCTAAGGActttttgtgat
tcttacttacgaagttttttatattttcaatacctaacctagtttttctt
tttttctctacaGAATCATCATGATTGAAGTGAAACAGTTGCAACGTGGA
ATACACCTCTGACGAGATCCAATCCAAATACATTTACCAAACGACCAAAG
TCGAACGTCCAACACCTCAAAGGATCACCGTCACACCTGTCGATGTTGAA
GTTAAATTCAAAGTCCAACGACATGTCCCTAAGGTTGGAGTCATGCTTGT
GGGATGGGGTGGCAACAATGGTACCACTTTCACTGGAGCTTACCTTGCCA
ACAAACACAACATCTCATGGAACACCAAATCTGGTGAAAAGCAACCGAAC
TGGTTTGGATCCTTATTGCAATCATCTACAGTCAGTCTTGGCTTCAGTGA
GCAAGGAGAAGAATTCGTTGCTATGAGAGACGTCTTACCAATGTTACAAC
CAGATGACCTCATTATCGATGGATGGGACATCTCCTCTCTCTCAATAACT
GATGCCATGCAACGGGCTGAAGTCTTTGATTTCGACCTCCAACGAAAACT
TGCTCCATACATGAACGACATGAAACCAAGACCTGCCGTCTATCGTCCAG
ACTTCATCGCAGCAAACCAATCGGACCGCGCGGACAATGTCGTGCTTGGA
TCGGCCGAACAACAAATGACCACCATCCGCAAGGATATCCGTGACTTCAA
GGAGAAGAACAAACTGGATAAGGTGATCGTGTTATGGACAGCAAACACTG
AACGATTCTGTGACGTCATCCCTGGTGTTCATGACACTGCAGAAAACATC
TTGGATGCCATCAAACGTGATGAAATTGAAATCTCAGCTTCATCAATCTA
CGCCTTGGCAAGTATTCTGGAAGGTTGCGCGTACATCAATGGATCTCCAC
AGAACACCTTTGTTCCTGGTGTTATTCAACTGGCTGAAGAACGTAATGTT
TTCCTCGGTGGTGACGACTTCAAATCTGGTCAAACGAAAATCAAATCAGT
ACTGGTAGACTTTTTGGTTGGTGCAGGCATCAAACCAGTCTCGATTGCCA
GTTACAACCACCTTGGAAACAACGATGGAAAAAATCTCTCAGCACCAAAA
CAATTCCGTTCCAAAGAGATCTCCAAGAGCAATGTCGTTGATGACATGGT
TGAATCCAATCGTATCTTGTACAAAGAAGGTGAAAAGCCGGATCATGTCG
TCGTCATCAAGTACGTACCGACCGTCGCCGACAGTAAACGAGCGCTAGAC
GAATACACGTCCGAAATCATGATGCATGGTACGAACACCATCGTCCTTCA
TAACACCTGTGAAGACTCGCTTCTCGCGACACCCATCATTCTTGATCTCG
TCCTCTTAACCGAATTATGTCAACGAATCAAAATGCGAGTAGGTACAGGT
GAATATCAAACCTTCAATTCAGTTTTATCGCTACTTTCTTACCTGTTGAA
AGCTCCACTTGTCCCAAAAGGCACACCAGTCGTTAACGCTCTCTTCAAGC
AACGGTCTGCTATTGAAAACATTCTAAGAGCTTGCCTAGCCTTACCTCCA
CAAAACCATATGACTTTGGAACACAAGCTTATGGACATGCAATCAGTTTA
CAATGAGATGAAGCCACAAGCTCTTATTTCTTCAGACAAGAAAGGAGAAC
TGAACGAAAAATCATCGCCACCAATGCGAACCAAATTAACGAACGGACAT
ACAAACACACAGAAAGAAATTTCTAtcatttaaataaaaacattttgaaa
aacgaaacaactgtattgaaaaatttttagtttatttaagAATAGATTTG
TTTTGAATCGTAACTAGTAATGTAAATATTTAGATATAATGGTCAGGTAG
GGTTGGAAATGAATTGAGCAttaatttaaaaagatttttacacTCCGATA
AAATCTATTTTAGGAAAGGAATCACTGTTAGAGATCATAAaagcaaatta
ttttgaaaataattcataGTAGATAGGAATATGGTTTGATAGACATAGAA
AGTATAATTAATAgctatttgatttatttttttgatattatgttttgtag
attattatttttgATAGCTCCCGGTGAGCACTATAATATCATGTAAATTC
TATAACATTGTTAAAGACTATTTCGTcgaaccaaaattttgattttaaat
ttgtcTATTCTTTGATCCAAGTTTTCGGCCTTCATACCGTTTCGGATTTT
TGTTTTAGTAAAGTAACTTTACCatagcatggaggtataaagaaagacag
gagatgaatttgtcggtaattggtcgttaaagtcttttgatttcttttat
gtaataaatcaaaagaaattctaggctcgcccgatgaaatacgacttttt
agtagaactcaagttttctctgaacattcttactatcaacatcgaagatt
tctagccttctaatatacgagaataaaataaaatttagctccacgcaggg
Coding sequence (CDS) from alignment at sc0000109_pilon:754379..759478+ >MSTRG.13631.1.p1 ID=MSTRG.13631.1.p1|Name=MSTRG.13631.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1491bp|location=Sequence derived from alignment at sc0000109_pilon:754379..759478+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTGTGGGATGGGGTGGCAACAATGGTACCACTTTCACTGGAGCTTA
CCTTGCCAACAAACACAACATCTCATGGAACACCAAATCTGGTGAAAAGC
AACCGAACTGGTTTGGATCCTTATTGCAATCATCTACAGTCAGTCTTGGC
TTCAGTGAGCAAGGAGAAGAATTCGTTGCTATGAGAGACGTCTTACCAAT
GTTACAACCAGATGACCTCATTATCGATGGATGGGACATCTCCTCTCTCT
CAATAACTGATGCCATGCAACGGGCTGAAGTCTTTGATTTCGACCTCCAA
CGAAAACTTGCTCCATACATGAACGACATGAAACCAAGACCTGCCGTCTA
TCGTCCAGACTTCATCGCAGCAAACCAATCGGACCGCGCGGACAATGTCG
TGCTTGGATCGGCCGAACAACAAATGACCACCATCCGCAAGGATATCCGT
GACTTCAAGGAGAAGAACAAACTGGATAAGGTGATCGTGTTATGGACAGC
AAACACTGAACGATTCTGTGACGTCATCCCTGGTGTTCATGACACTGCAG
AAAACATCTTGGATGCCATCAAACGTGATGAAATTGAAATCTCAGCTTCA
TCAATCTACGCCTTGGCAAGTATTCTGGAAGGTTGCGCGTACATCAATGG
ATCTCCACAGAACACCTTTGTTCCTGGTGTTATTCAACTGGCTGAAGAAC
GTAATGTTTTCCTCGGTGGTGACGACTTCAAATCTGGTCAAACGAAAATC
AAATCAGTACTGGTAGACTTTTTGGTTGGTGCAGGCATCAAACCAGTCTC
GATTGCCAGTTACAACCACCTTGGAAACAACGATGGAAAAAATCTCTCAG
CACCAAAACAATTCCGTTCCAAAGAGATCTCCAAGAGCAATGTCGTTGAT
GACATGGTTGAATCCAATCGTATCTTGTACAAAGAAGGTGAAAAGCCGGA
TCATGTCGTCGTCATCAAGTACGTACCGACCGTCGCCGACAGTAAACGAG
CGCTAGACGAATACACGTCCGAAATCATGATGCATGGTACGAACACCATC
GTCCTTCATAACACCTGTGAAGACTCGCTTCTCGCGACACCCATCATTCT
TGATCTCGTCCTCTTAACCGAATTATGTCAACGAATCAAAATGCGAGTAG
GTACAGGTGAATATCAAACCTTCAATTCAGTTTTATCGCTACTTTCTTAC
CTGTTGAAAGCTCCACTTGTCCCAAAAGGCACACCAGTCGTTAACGCTCT
CTTCAAGCAACGGTCTGCTATTGAAAACATTCTAAGAGCTTGCCTAGCCT
TACCTCCACAAAACCATATGACTTTGGAACACAAGCTTATGGACATGCAA
TCAGTTTACAATGAGATGAAGCCACAAGCTCTTATTTCTTCAGACAAGAA
AGGAGAACTGAACGAAAAATCATCGCCACCAATGCGAACCAAATTAACGA
ACGGACATACAAACACACAGAAAGAAATTTCTAtcatttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000109_pilon | genome | sc0000109_pilon:754379..759478 + |
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