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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000109_pilon:616936..626211+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13626.1.p1 ID=MSTRG.13626.1.p1|Name=MSTRG.13626.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9276bp|location=Sequence derived from alignment at sc0000109_pilon:616936..626211+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTTCGCTCTCGCAGAAAACGTCAAATTCTTGGAAGCTTGCCCTATCA
AGAAAAGAAAGGTAAAAAGAATTCGTCGCTTGGAAAAGTTAGCATTTGGA
AGTAGGGGAGAGACTACATACAGCAGAGGGAGAAGGTTCGCTCTCAGAAA
ATGACTTAACAGTGTTGTGAAAGTTAAAGTTACCACGCGTTTTTGGTTGC
CGCCCGGGCCGTATATTTACCAGCCCGCCCAACTTATTCCATTTCAAACG
CCCTCCGCCCATTGTGTGTTTGTGCAACTTTTCGCCATCGTTCTCTTCTC
AAAGGAAATCCCAAGGGTTTCCAGTGAAGTCCAAAGTCTACAATTAGCAG
CACTTTCTGGCATAACAGAACAATTCATGGACTCCTGTGAATCGTTAATA
CTTGGCGATTTCCAATCCTGTCCTATAGTACCAGTCACCTCCCGCATGGC
CCAACAAAATAGACTCTCGAAATGCCTCACAGAATTCATAGAAGAACACA
ATCTAACCCCTATCGATATGACAATTGGAAATGGACCAAAGTATACGTAC
CAACACTTATCGCTACCCAATCACTCTTACATTGACCACATCCTCATTTC
CAATGGACTCACAAATCTAACAGTCGACTCTGCAGTGCTAAATCCATCAG
CCACAAATACCAGTGACCACCTGCCAGTCACCGCAATCCTAGACTTACCT
CGCAATTCTACCTCAATAGAACCACGCATACAGAATGAAGAACCACACGA
ACTAGTACACATTCCAAATTATGTCTGGCGAAATGAACAATTTCTCTCTA
TCTACAAGCACAAAGTCTCAGCTTCCATTCAACTCCAACCCGACACAACA
AATCTACAGACTGACATAAACAATCTTAACAATCTTTTCCTCCAATGTGC
CTcagaaaagttaccatcaatttAATACCACAGCTTTCCAATTTCCAGCT
AAGAAATGGTGGAACCCAGATCTCACCAAGGCACGTACCAAACTAAACCA
AATGTTTAACCTCTGGAGAGACAAGAATTTCCCTCGTTGCCAGAATGATG
TCACGTACCAAAGATATCTGTACGCTAGAAAGAGTTTTAGAACCATGGCC
AAACGTTGCAAAAATCAATCCAACTTTGAACACTATATTAACAcagaaaa
aatacgaaaatctaATCCAAGAACATActggaaaaatatcaaaatgaata
GTAACCCAACACAAAAACTTTTCACCATTAAAGGGAAAACTTCCACATCA
GAGATTACCTCCGAGTTTCATGACCACTTTAAAAGTCTTTTAAACGAACC
AAGGACACCAGGCATCAATAATAAAGAGACCGAAACCCATCTAATACAGC
TGTTAAGTCACCTTCAAAACACTTCTTCGCAAGACTTCTACATATCTGAA
TGCGAGGTTGAAAAAGCAATTAACACGTTATCAAAGGACAAAACGCGTGA
TCCGTTTCACTTGAAATCTGAGCACTTTATTCACGCCCTTGACAGCATTT
CATTGCAATACACTACCAACCTTATCAATAAAATTTTCCAAGCACAGGAA
CTACCTAGAAGTCTGTGTACatccttgattatacccctagTGAAATCACA
CAAGAAATCGTTAAATGACCCGAATAACTACCGTGGAATATCTATCATTC
CCATTCTCACAAAGATTATCGAAATCATCATTCTGCAAAAGTGTCCTACG
ATCAAGGATCACGATACATCACAATTTGGATTCGCTTCCGGATCCTCATC
AATTCATGCGGAAATACTTATACAGGACACGATTAAACACTACAACAAGA
ATGGATCATCGATATACTTATGCAGCCTTGACGCGGAGAAGGCATTTGAC
TGTTGTAATTGGGGgaaactatttgaaaaattatgctCAAGAGTTGACAT
TCCACCCACAGTGCTTAAGGTATTAATTCAACTCTACCTCAACAGCGAAT
CTTCAGTTTTGTACAGAGATCACAGATCAGATCCTTTTAAACTTAGCCAG
GGAGTTAAACAAGGCTCTCTTCTTTCGCCATACCTGTACAACTATTACAC
AGATGGATTACTGAAAAGTGTTAAATCTCTCGAAATTGGAACTTTTCTGG
GCAACATCAACACCTCCATGATCGTGTATGCTGATGACATCATTCTCATT
AGTCCAACTTTAAAATCGCTTCAAGCATTGGTAGATGAATGCGTAGAATA
CGGACAAGCACACGGTCTTAAATTCAACCACCGAAAAACCCAATTCTGTA
CATCAGGGAATTATCAGATCATGTCCCCACATCTTGAATTGTACGGACAA
AAAGTCTATCCAAAGAAAACTCTCGAACATCTTGGATTCAAGTGGGAAAC
AAAAAACAGTCTGCTCCAACTTAAAGCTCACAAGGACACACGACTAGCAG
AGATGTGGGCAGTCACGTCATCTCTGATTTCAGCTGGCGTAAGGAAACAC
TCATCCAAACATCATCACAAACCTATTCCAGACGATTGTAGTACCCAAAT
TATTGTACGGTATGGAAATTTTAGATCTTACAGCTCTGATAAAATCCAAC
TGGAAGCCCAGGCACGTTCTAGCCTCAAGTCTCTACTTGGAGTGTCGAAA
CACAGTCGCAACTTGATGAAtaaaatttgcagaattccAGACATAGAGTC
AATCATTCGAAAACGTCAGATATTGCTCATAAATCAACTTTTGAAGAATC
ATACATTACGACAACATCTCCTGTATATCGCATCGCTGAACTCAGAACAA
AGATCGTTTTCCATTTTgaacacttttttccagcagtaCATTTTAAACGA
CTTAGACATAACAAATGGTCTGCTCGGAAACATCACTACGTACTCAACCA
TCAGTCCTGTGGAAGTTGAGGAACCTGAAATATCCCAATGTAAACTTTAT
TTACAGAACTGGCACATCCTAGAACACAGAGCAGCCTTTAAATCACTGCT
TGAGGCAAAAATCCAAAGGAATGTCTGATCTCCTTTTTATATTTTAGTAA
ATAATGATTATAAGATGTTTTCTATAGATTACTTtagatatcaaaatttc
ttgTAAGCCTCTTTAATcctattttcactaaaattacGTGCCTAAACTAG
TTATCCCTCCAGTGCCATTTTGTCAACTTTGCAActctttgattttcatc
aacCTTGATTTGTTTACGTCCTTATATTATTCTCTTATGCTTCCATCTAG
GTCCGCttacaatttatttatttttttttctttttttcgaagGGGATTCC
CCTGATATCCACATCCGCTCAGTGATTTTCCTATAGGGCGTTGTGGCGTC
TGTGGGTTTTACGAGGGAGAGACCACTCTTTCCATCCGGATAGGCCCCGC
TTGTTTAAGATTGGTCCCTCTTTCCGATACACACTGTCGCACACAACACC
CAACACCCATatgtatatataaaaaaaagaaagaaaaatgtataacCTGT
TAACATTGTAAACAAAACAgagatattttatattttatattttattatac
caagtattttGGTGATTaaagagatttgaaaaaaaaaaaaaaaattttac
gcAATCATCTTTGATGACTTAATTAGCTTCTTAACGATTTCcagtgattt
gattggttgttCACAAATTATGCTAGTTGAAAACACGCGTTCCATTGGTT
GGTGCTTTGTTACCTGATTTGATTGGTTGTTCACAAATTATGCTAGTTGA
AAACACGCGTTCCATTGGTTGGTGCTAAATATGCAAAATTCTTtcagaaa
gaaaaactttgcaaattTCAGAAACTGTGCTAGACGAACAAAACGAGTTT
GTAACATGGACGAGGGATGCGAGAAGAAAATGGCGAACGAAGCAGTTACT
TCTAAACCTCCAATTAGAGCTTGTGTTAGAGAATTTAGTGTTTATGTAAA
GCTAAGAGATGATATTTGTTACCTGTTGAGATGTAAGGAAGATGCTAAAG
GACAAGACATCATGGATGAGGTAAAATTCTGACGATTTTATCTAGGGTCC
AAAGTCCAATTTTGAATCGAAGTCCTTTTCTACTTGACCCTACCTTGGct
tcttctatttttcttttcaagtttCCAATCTGATAGAATATTCCTTCAAT
TGGTTTAGAGGTTTCTCCATTAGGAAAAGCTTGAAGAAAAACCTCCAGGC
TTAGCAgcttaaagttttaaaataattaGTGCAATAATATAATTAACATC
CCattaaaaatgtttggaaaaatccttaaaattgaGGGTGAAGTCAACTT
TTCTTGACATGATAAGGGATACAATTCATgttaaatttttgtcatttgcT
TGCAAACCTACAGTCAGGAGATTTGGCCTAATTTCGGCCTTTTATATGCA
CGCAGCCATTTGTCATACAAATCATTGATTGCCAAAACAGATTTGGATAG
TTTTtcatataccgtcaactgctctaactttggactatctgacaaaacat
gggacggcaattcggccaccatttcaccgaacctccaaggtcatttgatt
tgagttaaggagcgGCGTATTAAAAactacacaatttctctttcgatttt
acagtactGTAAGtgaatacagaccagatatgcaacagtcccacaTAATT
TTCGAAATGGTTGAtttttttCGATCTATGATTTGTATGAAAAATGGCTG
CTTGCATAAAAGGCatcaaaggcgaaaaggtctattaggcAGAAAGAGGA
CCAGTCTTCAGAGCATGTCATGGTTGCCCCCaaggaaaatttccaacatA
AAACTCTGCCCCTAAGATCCGTTTCCCACCACaaaaaaaGCTagaaaaaa
caggtaaatataGCCAGTTTTCAATGATCTTGCCCCAGAACTGTAgatat
tattaaaattttgcccCTGCCCTTGTAAAGTGAGCAATCTTGGCCCTCAA
GATCTCAATGATTTCTGTCACACTCTGAAAACTGGAAAGAGGATAAAACA
ATTAAATTGATAAAATGTGTTGAATagttaaacaatagaaaaatatactg
taagttggtctaatattgatatcccttgtctaattccaACACCATTTCTA
GAGACAGGAaaaatatgaaagcttgaatcactgattgaaaaaggattatt
cctctctgaccaccaagcaaagaaaaacagtttcaacccttctatcaatt
tcagctgataaaaagggtgtcagaataAGAGGttggatgttgacattaga
ctaAGTTACGGTAGGACATAACAGGGGCCGCGGTTCCACATTGAAAGTGG
TAGAGCCATGGTTTAGTGTCTAAGGaagcgccaccatggttggcgctgag
gggagaaattttggaaaattagcCCCTTCTAGACTGCCTAAAAAAggtct
ttttcaaggtttttacgcAGAATTTAGCTgaatcagtaaatttttttttg
ctttgaaaaaatgtggtcggTGGCCCCCCGCTGCCGCGGCCCCTGCATAA
GAACGTAATTagtcaaaatcccaatgggaaagaaaggctaaaataaaata
aagagaCCTAAATAGGAGGCAAGACGATAGACTCAAGGGACCAAACTAga
caaaaccttagaaaaaaGGTATAAATCTCTTGAGGCTTTGAGGCCATGGT
TCTATATATATGATCTACtttgtgatttatttatttaatgaatgtttatt
gattttactttcattttttcatagaTGTGTGACAAACTTGGGATTATTGA
AAAAGATTACTTTGGCCTTCAGTATTTCACCCGAAATAATGAAGCACACT
GGCTCAATATGAGAAACAAAGTTATCCGGCAAGTAAACAAGCCCCATCTA
CTCTTTAGGGTCAAATTTTACGTCCAACCACATCAGCTTCTTCAAGAATC
GTCAAggtaaataaatcataaatcacatAAATGCGTTTTAACTCGCATTT
TAGACATGTTGGTGCCAACAGTCAGTTAGCAATGCTATATTGGAATGGCA
AGTTTTGCTTTAGGGGGGAATATTTTCTTGAATAGGaaggttgaaaaaag
tttttcatgaaACCGCTAGAATTTCCAAATCAGGAAGGtttttttGATTA
GGAGATTAGGTATTGAGCACTCCAGAAACAGCTGCAAAAGATGAAGAAAT
GTTCCCAATTTGAAAAGAAGGGAAACAAATTACATTCACTGGATAGTGAG
GTCTAGGAAATTTACTGGGTACCCAGATTCTTAATTCCTGATTTGGCATA
TACTTCCCAAAGAAAGCACGAAAAATTGGTGGAAATTCCAGATGTTTATT
TCCTATTTAGGTAACACAACTTTCCTGttggaaaaataattctcatGATG
GAAGTTCTTGTCCTTTCAATATAGTGTTTCAGAAATAAAACACCTGCACC
TGCCTGTACTCTCTTTAcaaatttgacattttctctttttaggagGCAAT
TCTTTTTGAATGTGAAATATGAGAtcatgaatggaaagtacaaCTCCAGT
GTTTCAAAAATGCCTCGTTTATATGCACTGATTGCTCAAGTTGAAGCAGG
AAAATTTCGAGAGAACCATATCAGCTATAACCCATCAAGAGCATCAAGCT
GGGATGCAGATTTTAGAACAAAAGTGATTTTAGAACATTGTAAACTCCAA
GATATGACACCAGAAGTTGCAGAATTTTTCTGTCTCAGAGAAATTGCTGA
ACTTGAGGAATATGGAATGGAAACATGTACAGTACGTAGTGAAGATAATA
ATCATGTTGTGGAATTTGGTATCGGAATAGATTGTATCAGGATAGATCAC
GGAGAAGATGAAATACAGAGGTAGGAATAATtctaaagttgtaaaattta
tgtttagGCCagttttaggtaaaatgatGAATAATTTTCAATGTCTTTGA
ACAGTTGAAGAAACTTGTCTGTGTACATATTTATGTTTATTGTTTTGAAG
CTcctttctaattttgatttttcctctTCTTCAGCATACCATATACTTGC
TTGAAAATGGCTACACACTCAGGAAAGACTGTTAAATTGAACATTGTTGT
ATCAGACTGTGGAAATACTGAAACAATCTTGTATCGTTTAAATTCGAAAG
AAGCAGCCGTTTCATTGTATAGATCAATAACAGAACATCATTCATTTTAT
CGTTGTGATAGTGTAAGACCAGCAGTGAAAGAACAAGTTGCCAGAGAttt
ttttGATACAATCTTATCATGGTTTCATGAAGATGAccagaattatattt
ttgatacgGAAAGAACATGTAGGGAAGCTTACGATCATGCTAGGAGGACA
CTTTATAATTTTGGATCAACAGCTGTTGCTGATGTTGTGGCACAGCGCAA
AACTCTTTCTAAGGGAACTACAAATGATGAGCCTGAAACATTAGAAGAGC
AAGTAGATAATCTGAAAGAAGAACTAAGATGTTTTAAGGATGCATTTCAT
TGCCCAGTTTGTAGAGATTCTGTGGTTGATGTGGTATTACAATGTGGACA
TTTAGTTTGTTCAACTTGTGGAGATATCTGTGAGGAGTGTCCACTCTGTC
GAGTAAATATCACGACGCAAACAAAACTTTATTTACCAATTAACCTGTCA
CAGGACTCGATAGATGTACCTATGGAACAGGCCCCTGTGGAAGAACATCT
GGAAGTAGCATGTGCAATGGAGTAAAATTACGTACATGGATGGATCTATG
CAAATGGTGGTATGGCAGGATATGGATTTCAATGTTATGGAGTCGGGAAA
TATATTTGTTCACTGTGTGAATACCCTCTTGTGTTTGGAAAGCCTcaatc
aaaaaggaaaattgcAATTTGTTTTATGGAAAGTTTTCTAATTGTGCAGG
GTTTATTATGTTAAATGATACttgatataaaaaatcaaaaaaagtgtaTG
GAAACTTATCTTTAgtgaaaaattctttattttatttagtatgaAACAAA
TAACAAAGCACTTGAAGTTTGATtgcatttcaaatttcaactaGTTGTTT
ATTTGCACTGCAGTGGAAATATTTAACCAAGCACATGTTTCACAAGAAAA
GGACTTGTATTTTATAGTTTCCTTTACATTTTCAGAAGTAGCAGTATTGA
AAAATCAGGAGTctgattgaagatttttttaatttttaaaaaacatgcGT
TCACAAAGCATGGTATACACCCTTTACAAGTTGTTTATTAGTACTTTATA
CATATTAAAATAGATGTTTGTAATATAGTCAAAAACGTATATAGATGTAA
ATTCGTATCAAGTTTTGAACGCTAAATCTCTTGCGGATTGCTGCAGACTG
CTGTTAGCTCGCTTCTGTGAGGTTTGCTGCAGCCATGGTCTGTGCTATCT
ACTCCTGGATTTCTTTTGAATAAAACAATTTGTCAACTGGTGTTTAAAGC
TTGATGTGATTGAAAAAACTATTTAGAGAGATGTtgtaagattttttgtt
tttatttttaatattgaaatttgaaaaaaaggtattTGAGTTTATAATTT
GTTCTAATAGTATACTTTAAATTTATATACAAAGATTAACATAAAAAGAC
AGAAATTGTTCTCGAATTTCAAGGCAAGATGTTGTTTTATCATCTCGTGT
TTTTTGCTCAGCTTCAAAATTAGATATAGTTTTTTCATACTGGTCATGGA
AAGTTCGTGTCAGTTCTAAATGTAATTTAATAACTTTTCCGAGTGCTTTT
TATGGAAAGAGAACAATTttgagcttgattttttgtttatttatgatAGA
TAACATAGTCTTTTAACAATATTATAGGAgcttaaaaaagagaaaagggg
ATATTTTTATTATGATCATTTCCGAtgttttcagatattttttttataag
gtgTAATTTTTAGGAGATCTATTGTTAGGCAAATTTTCTGGCGTCAGATT
TCTCTCCCTAAATTTGGTTTCATTGTCTTAATCTCAATTTATTCCTTTGT
TTACTTGATtctattttgctaaattttgaaatatggtccCTAGTCCCTCT
AGCTCATTGCAAATAAAGAAcaagaaacatttgaaaacctGATAGCTGAA
ATGTTTGAACATCACACACTCTCTCTTTGCTGGTCCacgatttaaaagtt
agatatTGTCCCTGTAACTATAGATATTTTTTAGGATTACGTCACTAGTA
TCTGTAGCACGTATCATTGCTCTGATCTGAACAAAGAGATATTTTATTCC
ATATtattgtgtgcaaaatttttttattttgtttaaatcttaatttaaag
aaaaataaaaactcacttttatatttatttaaaatcttGGTTTGAATCTT
TGTTCCCTAATACCAACCAATTTGAC Coding sequence (CDS) from alignment at sc0000109_pilon:616936..626211+ >MSTRG.13626.1.p1 ID=MSTRG.13626.1.p1|Name=MSTRG.13626.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1977bp|location=Sequence derived from alignment at sc0000109_pilon:616936..626211+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTAACCTCTGGAGAGACAAGAATTTCCCTCGTTGCCAGAATGATGT
CACGTACCAAAGATATCTGTACGCTAGAAAGAGTTTTAGAACCATGGCCA
AACGTTGCAAAAATCAATCCAACTTTGAACACTATATTAACAcagaaaaa
atacgaaaatctaATCCAAGAACATActggaaaaatatcaaaatgaataG
TAACCCAACACAAAAACTTTTCACCATTAAAGGGAAAACTTCCACATCAG
AGATTACCTCCGAGTTTCATGACCACTTTAAAAGTCTTTTAAACGAACCA
AGGACACCAGGCATCAATAATAAAGAGACCGAAACCCATCTAATACAGCT
GTTAAGTCACCTTCAAAACACTTCTTCGCAAGACTTCTACATATCTGAAT
GCGAGGTTGAAAAAGCAATTAACACGTTATCAAAGGACAAAACGCGTGAT
CCGTTTCACTTGAAATCTGAGCACTTTATTCACGCCCTTGACAGCATTTC
ATTGCAATACACTACCAACCTTATCAATAAAATTTTCCAAGCACAGGAAC
TACCTAGAAGTCTGTGTACatccttgattatacccctagTGAAATCACAC
AAGAAATCGTTAAATGACCCGAATAACTACCGTGGAATATCTATCATTCC
CATTCTCACAAAGATTATCGAAATCATCATTCTGCAAAAGTGTCCTACGA
TCAAGGATCACGATACATCACAATTTGGATTCGCTTCCGGATCCTCATCA
ATTCATGCGGAAATACTTATACAGGACACGATTAAACACTACAACAAGAA
TGGATCATCGATATACTTATGCAGCCTTGACGCGGAGAAGGCATTTGACT
GTTGTAATTGGGGgaaactatttgaaaaattatgctCAAGAGTTGACATT
CCACCCACAGTGCTTAAGGTATTAATTCAACTCTACCTCAACAGCGAATC
TTCAGTTTTGTACAGAGATCACAGATCAGATCCTTTTAAACTTAGCCAGG
GAGTTAAACAAGGCTCTCTTCTTTCGCCATACCTGTACAACTATTACACA
GATGGATTACTGAAAAGTGTTAAATCTCTCGAAATTGGAACTTTTCTGGG
CAACATCAACACCTCCATGATCGTGTATGCTGATGACATCATTCTCATTA
GTCCAACTTTAAAATCGCTTCAAGCATTGGTAGATGAATGCGTAGAATAC
GGACAAGCACACGGTCTTAAATTCAACCACCGAAAAACCCAATTCTGTAC
ATCAGGGAATTATCAGATCATGTCCCCACATCTTGAATTGTACGGACAAA
AAGTCTATCCAAAGAAAACTCTCGAACATCTTGGATTCAAGTGGGAAACA
AAAAACAGTCTGCTCCAACTTAAAGCTCACAAGGACACACGACTAGCAGA
GATGTGGGCAGTCACGTCATCTCTGATTTCAGCTGGCGTAAGGAAACACT
CATCCAAACATCATCACAAACCTATTCCAGACGATTGTAGTACCCAAATT
ATTGTACGGTATGGAAATTTTAGATCTTACAGCTCTGATAAAATCCAACT
GGAAGCCCAGGCACGTTCTAGCCTCAAGTCTCTACTTGGAGTGTCGAAAC
ACAGTCGCAACTTGATGAAtaaaatttgcagaattccAGACATAGAGTCA
ATCATTCGAAAACGTCAGATATTGCTCATAAATCAACTTTTGAAGAATCA
TACATTACGACAACATCTCCTGTATATCGCATCGCTGAACTCAGAACAAA
GATCGTTTTCCATTTTgaacacttttttccagcagtaCATTTTAAACGAC
TTAGACATAACAAATGGTCTGCTCGGAAACATCACTACGTACTCAACCAT
CAGTCCTGTGGAAGTTGAGGAACCTGAAATATCCCAATGTAAACTTTATT
TACAGAACTGGCACATCCTAGAACACAGAGCAGCCTTTAAATCACTGCTT
GAGGCAAAAATCCAAAGGAATGTCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109_pilon | genome | sc0000109_pilon:616936..626211 + |
|
