MSTRG.13607.1.p2 (mRNA) -

Overview
NameMSTRG.13607.1.p2
Unique NameMSTRG.13607.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000109_pilon:282286..284643+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13607.1.p2 ID=MSTRG.13607.1.p2|Name=MSTRG.13607.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2358bp|location=Sequence derived from alignment at sc0000109_pilon:282286..284643+ (Clytia hemisphaerica_ch_hm2_pilon)
catacttttaacttttgacacgtgttttacgaattttttataagcactta ttggtgattttttgacaaaattttgttgcgtttttatctgattgagtaaa agtttgacgttttgatatttgGGAGAATTTATAAGTTATTATGGCTGCTG CTCTTGCGAGAAAGAAAGCAAGGAGAGAGGCTTTCAGGACTAGTCTCAAA GAGATTATTGAAGAAGCGAATAGAGAGCTAGTAAATGAAGATTTGGGGCA AGCTAAAATGGTGAGTTTGAAACAGAGAATGGAGACTTCTAGAGAAGGAT TAAGTACCTTAGATGACGAGATTGCCAACAGTTTAGACGCTGAGGAAATT CAACGGGATGTTCTTGACAGTATAGAAGCAGTCAAGCCGACGTACGAAAT ATTGGCTAACCTTCAGTTTCGACTTGAGAAACTTCACCTTGAGACCATGA AAGTTTCTAACTCTGTACCTGAAAGAGCCAATAGTTCTGCTTCGTCAGTG ACAAAGTCTTGTAGGTTGCCAAAGTTAGAATTGCCGACTTTCAAAGGAGA TGTTTTAAAGTGGAAAGGCTTCATTGAACAGTTTAGCAAGACTGTAGATG ATGACGAAAGTTTAAGTGATATTAAcaagtttatttatttgaagAGATAT TTGGGGGGTCAAGCGTCGAATTTCGTTTCTGGTTTGTCCTTAACAGCTGC TAATTACAAGGAAGCACTGTCACTTTTGGAAGGTAGGTATGGGAATCACC AAGTTTTAATTTCAGCTTACATGGAGTCTCTTTGAAATTAAGAAAGGTTG ACAGTATGTTAGAGACAGAAGTTTGAGGAAATTAGCTAGTGATGTGGAGA ATTGTGTCAGAAATTTGAGGTCTATGAACGTAGAAACTTCCACATATGGT AGTCTTTTGATTCCGATTTTGAAGGAGCGACTTCCAGATGAGTTAGTTTT CCACATTTCTAGACGTTTTGAGGATGAAGTTTGGACTTTAGACAAGTTGA TCGAGTATATGAACAAGGAGATCAGAACTAGTGAGAATTGTTCCTCATTC TTAGGTGGATCTTCATCGTCTCCTTCGTCCAAAGGTAAGTCTACCACATG GAATCTTTTCGGTGGTATGAGTGAGGATGTAGCTGATAAGTGTGTTTTCT GTAGTAAAGATCATGCATCTCACAAGTGTAGAAAGGTTACTAATGTCAAG TCCAGGACTGACATGTTGAGGAGAGATAGGAGATGTTTTCTCTGTTTTGA AAGAAAGGTCCTCAGAAGCGAGAGTGTAGAGTAAAGTATATTTGCAGGAA CTGCAATGGGAAGCATAACATTGCAATTTGTTTTGGAAAGGgagacagga acgagagagaaatcgagaagagaaaagagatagagatagaaatcgtgagg aagagatcaagagaatagagtcagaaatggtgatcgaggtggagaagaca gagagagagaTCAGGATGACGGAGAGTCACTAGAAGAAATTCAGCAAGGT CTTGTTATGTCAGCCAGAGCAGAACGCGAGTCTATTTTGTTGCAGACAGC TACAGCTTATATTCAGGATAAGTGTAAGAGACAGGGGAGTTCTTCtaaga ttttgtttgaaagtGGCAGCCAAAGGAGTTTCGTGACTCAAGCGTTGAGA GATAAGTTACAGTTGAAGtctgaaagaaaagagaaagtAGTCATCAAGAC TTTCGGTGAGGGAGACAAcagcaaaaaagtttccaagTTCTTGGATGTTG TCACGATCAAGGTTAAACACAAAGGCCGCAACTCTTTCACAGCTGTTGAA GCACTTTGTGTCCCGAGGATTTGTGGCTCGATATCCAAGGTCTTTGATCG TTCGAAATACGATCATTTGAGGGATTTAGAGTTGGCAGATACCTTTAATG CGGTTTCAATCGATTACCCAGTTGGTGTTCTTGTCGGTATTGATTTTTAC CATGACTTTTTCTCCGGTAAGACCAAAACAGGTAAGTCAGGTCCAGCTGC GTCGAAGACGGTCGTTGGTTGGGTTTTGAGTGGAAAGGTTAAGGCAAAGG TCAAAAGTGAAGAGGATAGTTATTGTTTTTTGAACTTTAGGTGTTCTGTT GAAAGTGATTCGGATCGACAGTTGAAGGAGTCTTTCGATCGTTTCTGGGA AGTTGAGAACATTGGTAGGAAAGATTGTGTGGTGCACCAGTTTGAGCAAG ATATTGTCCATACTGGAGAGAGGTACCAAGTGAAGTTGCCTTTTAAGCCG GATCATGATACTATTCCAGACAATTTTAAGACTTCTGAGAAGAGATTAGT TTCCTTGAAGAAGAGACTAGAAAAGTCAGACTTGGTAAAGAGGTATAATG AGGTTTTT

Coding sequence (CDS) from alignment at sc0000109_pilon:282286..284643+

>MSTRG.13607.1.p2 ID=MSTRG.13607.1.p2|Name=MSTRG.13607.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=645bp|location=Sequence derived from alignment at sc0000109_pilon:282286..284643+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGCTGCTCTTGCGAGAAAGAAAGCAAGGAGAGAGGCTTTCAGGAC
TAGTCTCAAAGAGATTATTGAAGAAGCGAATAGAGAGCTAGTAAATGAAG
ATTTGGGGCAAGCTAAAATGGTGAGTTTGAAACAGAGAATGGAGACTTCT
AGAGAAGGATTAAGTACCTTAGATGACGAGATTGCCAACAGTTTAGACGC
TGAGGAAATTCAACGGGATGTTCTTGACAGTATAGAAGCAGTCAAGCCGA
CGTACGAAATATTGGCTAACCTTCAGTTTCGACTTGAGAAACTTCACCTT
GAGACCATGAAAGTTTCTAACTCTGTACCTGAAAGAGCCAATAGTTCTGC
TTCGTCAGTGACAAAGTCTTGTAGGTTGCCAAAGTTAGAATTGCCGACTT
TCAAAGGAGATGTTTTAAAGTGGAAAGGCTTCATTGAACAGTTTAGCAAG
ACTGTAGATGATGACGAAAGTTTAAGTGATATTAAcaagtttatttattt
gaagAGATATTTGGGGGGTCAAGCGTCGAATTTCGTTTCTGGTTTGTCCT
TAACAGCTGCTAATTACAAGGAAGCACTGTCACTTTTGGAAGGTAGGTAT
GGGAATCACCAAGTTTTAATTTCAGCTTACATGGAGTCTCTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13607MSTRG.13607Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13607.1.p2.exon1MSTRG.13607.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13607.1.p2MSTRG.13607.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109_pilongenomesc0000109_pilon:282286..284643 +