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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000109_pilon:211509..215626+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13603.1.p1 ID=MSTRG.13603.1.p1|Name=MSTRG.13603.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4118bp|location=Sequence derived from alignment at sc0000109_pilon:211509..215626+ (Clytia hemisphaerica_ch_hm2_pilon)
TTATAATTAACACTAGTCTATCTACAGAGAGCGAAGCTTAAGCATAAAAA
ATTATAGGAGACACTTGCGAGATTCGATTTATGTGATAGAAACTTTGGGG
CATTATCATCCCTTCAGATTTCTACGCATTTTCAGCAGTTACGATATTTT
CTCTTTTGCCCTTCCAATTaaaaaaaGAGTTGACACATAAAACAAACACT
TCGTACAGTATCgggtttatttactttttaaagGAATATGTGCTTATGGT
AGACGGAGAGAGATGTAAGAGGTTAATCTTTCAGCACTTTTGGAATACCC
TCTGGGAAAACCctttaatgttttcaaatatAGCTACTCATGATATAAAG
AGGTTGCATGATATTCACTACGTATTTTCATATGTGTATTAAAGTAGATG
GTCGAGAAAACAAGAATTTTCATCATATTCCAGTTTCAAGGTAATGCTAC
TATTcttgtttctgatttttcatCCTTCAATTCcttcaaaaaagttgttc
agaatgggcttttccagttAAAATCCGTACCCCCACGTTGAGGATatcca
ttttcaaaattgttaaacCCTGGGATGTCGAAGCCCTATTTTTCTCCAAC
CCCTTGGAtttccgatatcctcaacatggGGGATACAGAGTTCAtatgga
aaagcccattatggcggctaaatacaaaaaaattctcaatagcctgtacc
aaactcttctacGCGATTATATCACCAGTTTGTCCAAGAAATATTCGGGT
GTACCTTGGCCTTTTAGTGCCCTCCaaaaaaaTGCTGCTGGGGAACAAAG
TTCAATATCACGACTTTAAGAGAATTTTATTCCTCTTTGGCTGAAAAGAT
CAATACTATGGTGGCATGGGGTTCGAAATTGAATAAAGCTATAACAAGTT
TCAAAACCTTTCTTCAATCTACAGGATCTTCACTGCAAGAAATCTATGTC
TCACAGAACAAAGCAAGTCGAGATGTTAATACATGCGGCATACCAACACA
ACCGTGTCGAACTATTCCGTACGCAATCACAAAATCCAATCCTTCAGATA
CCATCTTTCTTGACGCTGATTGCACATTCGTTCAAAACAAAGCCCTTTTT
ATTGATACACAATTGACTTTAGGCTCGTATGGAGGGCGGGATCTCCATCG
CAAGAATGCTGTCATCATGTTCTCCCAATCATTCCATAGTAATACCTTTC
TCTTTCACTTTAATGGAAACGTGACAATGAACAATTTAACCGTTGTTTAT
AATTCTACCTGGCAGCACTTGGCTGTTATCTTTGACTTGGGAGACGGAGT
TGTCCTTAAAGTAAATGATTGTATTTTAAACCTTTTAACTGATCCGAAAT
TGACGAATTTGGTGTACGATGTGAATCAGTTTTCAtctattttattttac
aaaacgACTTTTGATGGCTTTGGAAGCCAAAAGCACCTCGCCAAAACTTA
CAGTGGACACCACCAAATATCTCGTACGAATTCAAAAAAGTATTCTGAaa
ccattttcgatttttgttcCTTCAAAAGTTCTATCATCTCCCTAAATCCA
AGGATTTTTTCCGTCTAAAAGAAACCAAAGGAGCATTCAAAAAAGACATC
CCTGACAGTTCCAGGCCAAAGTTTATCGATCACAAATTCCATATTTGAAA
TGACAGAGGTCACCGTTTATGATTTTGTTACTATCACACTCGATAACAAT
CGCTTTAAACGTTCACCTGTTACAATCGTTAAAGCTTTGAATTACAAATC
TCACCTAGTCAAAGTTACAAAttgtcattttcaaaaatcatattacaaga
atttcaacaaaatatacCCTTACCTTTTAAAAATTTGGAATCAAGGAAGT
ATTCTTGTCGATAATTGCACATTTGAAGGGGCTACATACGGTGCGTTAGG
TATACAAGATTTGAATGACTTAACTTCTACCTTGAAGGAAATAACATACC
TACTGACCGTGCCGCAGGATTAACAATGCTGAGTGGTGGATTTATGAACT
TTGTTATTTCAAATTGCTCCTTCATGAACAATTCAGCTGTCTCTGGTCAA
ATTGGTTCAATCAAAGTTAAAGCAAGCACGTTGCATTTCGATGCGTCATT
AAAAGTTTCGAACACTACCATCAATTTGGGTGCCCACCATTCATCATTGA
TTGGCACAAGTGTCTTATTTGAGACATATGATTATCAAAGTAACGTACCG
TGGTTTTCTATGGATGAAGCTTCAAAGATATCATGCCCAATTGACAAGAC
GATTCGGCACCATTATACTCCAAAGCAATATCTGCGACTAGATTGTATCA
GTTGTAACAGCTCATCATACAACGTGATTGACAGAGCTTTCATACGCGTT
AATAACTCTGAAAAGCAGTCGTTGGAAGAATATGATATTACATGTCATAG
TTGCCCTTACCAAGCCTCTTTCAAAGATGGTGCTATTCGGAGTAAAGGCA
ATTACTGGGGATTATCTGACAATTTTGGTGAAGTAACCTTTTACCCTTGT
CCTCCCTTATATTGTTGCTCGTCCTTAGAAACGTGTGAGTCGTACAACAC
TTGCACTGAGAATCGTGTTGGAAGACTATGTGGCGATTGCCAAAAAGGAC
ATTTTCTATCATTTTCAGTCATAACCAATGTCTTGATAAATCGTTTTGTC
AGTATTCATGGACTGTTTGGTTTGGTTATGTCTTTTTGGCTGCTCtcatt
tgttcattttttttgttcaacAAAGACGTTTGGAACCGCATAAAGAATGG
AAAGGGAAGCATCAATAGTGAGTCATTTGAAACAGAAGAATTTCTTTCGG
ATACTGATACCACTAACGAACTTCTGATTTCACATTCTCCGTTTCACAAG
AAATCACCACAGTCCTACCAATTACCGggatttataaaaatcactttctt
tttttACCAAACGGCTTCGATCATTCGAGTTGTCGCGTCAGCAAAAACTT
ACTATCACATGCCAACCATTGTCAGTTTTTTCTTTACGTTCTTCAACATC
AAATTGGACTTCAATacaattttcatcaaagtttgTCCTTTGTGTACAAA
TAGTATGGTTATTATGGATGCATTGAAATCTAGTTTATCGTTAGCATGCT
TGATAATGCTTACGCTGGCAATAATTGTTTGTGGTCTGCTCAAATGCTTA
TTGAAGAGGAAGTGCGAGTCATTCTTACGTCGATTGAAAGGAGCGTATGT
TAATGTTTTGCTGCTCAGTTACTCAAACATTTCTGTGTTTTGTTTACGAA
ATATCCATTGTGTAGAGATCGCTGGTGAATCATATTTACACGTTCAAGCT
TCCATCAAATGTTATACTGATTGGCAATATCTTATCATGGCCGTGATTGC
TTTATGGGTGGTTCCTTTCCCTTTAGTGTTATACACTGGTTGCCGGACCC
TTCGGTCTTATCGCATCTCACCGAACGAGTTTCTTATGATTCTTACTATA
CCGcccttatcattgtttttcttggTCATCCGCCCTTTGGCGTTCACCCA
ATACCATTTCGTTTTCGACCAAGCCACCCTTGAAGAAAAGGATCAAATAT
TAGGTGTGTTGAACGGACCTTTcaagttgaatttcaaaaatcaagaatca
cATCTCGTCTGGGAACCTGTTTTGATTTTACGCCGTTTGTTACTGATCGT
CACGACAACCTTTATTTCGTCACCAATCATCAAACTTTATCCCGTGGGTT
TGCTTTTCTTCAGTTTTGCCGTGCATGATTTTGTACAAAATCCATTTGac
aatcaaaaattaaatttcattcaaaatgtaTCAATGGCCTTATTGTGTCT
TTTGACCCTATTTAATACTTTCTGGGCGGTTACTAACAGTGTGGATTTGC
TTCAAGACAGAATTGATCACATCCTTGGTGAAATATTGTTGGCTTGTGAA
GCGTTTattttatgcttccctattgtttgcatggtaatttatttgattta
taagtttattttaattttttgctttaGAAACAAGAAATAATTGAATTTCA
CCCCCAGTTTACTCCCTTTAGATCTTTTTGAATGAAGTCTCATGTCAAAG
AAAGGTTTCAAAGATTGATTCATGTTAAATTCAGTAcaccctttttttga
aaatgatttggcTAGAAG Coding sequence (CDS) from alignment at sc0000109_pilon:211509..215626+ >MSTRG.13603.1.p1 ID=MSTRG.13603.1.p1|Name=MSTRG.13603.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1413bp|location=Sequence derived from alignment at sc0000109_pilon:211509..215626+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGGCGATTGCCAAAAAGGACATTTTCTATCATTTTCAGTCATAACCA
ATGTCTTGATAAATCGTTTTGTCAGTATTCATGGACTGTTTGGTTTGGTT
ATGTCTTTTTGGCTGCTCtcatttgttcattttttttgttcaacAAAGAC
GTTTGGAACCGCATAAAGAATGGAAAGGGAAGCATCAATAGTGAGTCATT
TGAAACAGAAGAATTTCTTTCGGATACTGATACCACTAACGAACTTCTGA
TTTCACATTCTCCGTTTCACAAGAAATCACCACAGTCCTACCAATTACCG
ggatttataaaaatcactttctttttttACCAAACGGCTTCGATCATTCG
AGTTGTCGCGTCAGCAAAAACTTACTATCACATGCCAACCATTGTCAGTT
TTTTCTTTACGTTCTTCAACATCAAATTGGACTTCAATacaattttcatc
aaagtttgTCCTTTGTGTACAAATAGTATGGTTATTATGGATGCATTGAA
ATCTAGTTTATCGTTAGCATGCTTGATAATGCTTACGCTGGCAATAATTG
TTTGTGGTCTGCTCAAATGCTTATTGAAGAGGAAGTGCGAGTCATTCTTA
CGTCGATTGAAAGGAGCGTATGTTAATGTTTTGCTGCTCAGTTACTCAAA
CATTTCTGTGTTTTGTTTACGAAATATCCATTGTGTAGAGATCGCTGGTG
AATCATATTTACACGTTCAAGCTTCCATCAAATGTTATACTGATTGGCAA
TATCTTATCATGGCCGTGATTGCTTTATGGGTGGTTCCTTTCCCTTTAGT
GTTATACACTGGTTGCCGGACCCTTCGGTCTTATCGCATCTCACCGAACG
AGTTTCTTATGATTCTTACTATACCGcccttatcattgtttttcttggTC
ATCCGCCCTTTGGCGTTCACCCAATACCATTTCGTTTTCGACCAAGCCAC
CCTTGAAGAAAAGGATCAAATATTAGGTGTGTTGAACGGACCTTTcaagt
tgaatttcaaaaatcaagaatcacATCTCGTCTGGGAACCTGTTTTGATT
TTACGCCGTTTGTTACTGATCGTCACGACAACCTTTATTTCGTCACCAAT
CATCAAACTTTATCCCGTGGGTTTGCTTTTCTTCAGTTTTGCCGTGCATG
ATTTTGTACAAAATCCATTTGacaatcaaaaattaaatttcattcaaaat
gtaTCAATGGCCTTATTGTGTCTTTTGACCCTATTTAATACTTTCTGGGC
GGTTACTAACAGTGTGGATTTGCTTCAAGACAGAATTGATCACATCCTTG
GTGAAATATTGTTGGCTTGTGAAGCGTTTattttatgcttccctattgtt
tgcatggtaatttatttgatttataagtttattttaattttttgctttaG
AAACAAGAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000109_pilon | genome | sc0000109_pilon:211509..215626 + |
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