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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000109_pilon:21501..25585+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13594.1.p1 ID=MSTRG.13594.1.p1|Name=MSTRG.13594.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4085bp|location=Sequence derived from alignment at sc0000109_pilon:21501..25585+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTATATTGATTGTCTTTGGGACATAATGGTGAATTCTTGATTTATTTT
TACTAGTGTGCACCGCCGTTAGTAGTGGCATCAAACATTGATGAGAAGAC
ATTGAAACGTGAAGGAGTATGTGCTGCTTCTTTACCTACCACCATGGGAA
TTGTTGCTGGTTTCCTCGTACAAAATACACTAAAGTAAACAAGTTTTCAT
CTTTATGTTTCTACTGTTAATTTTAAGTTGAATCGTAGCTTTCTAAAAGT
TTTTCACCTTTAAACATTACTCCCATAAGTCACTGCACGCCTACTAGACC
TGTAGATTTTCtggctgatttttttctcctcgcattgctatctaactttt
atcatcaggtaggtccattcagcatctagcttgtttctaCTGGATCGaaa
aaaaCCCGATCTAGTAAGCAAAGGTCCCTATTTATGGGGACGTCCTTAAA
TATAGGTACTCTCCCGTACAGATAAGGGAACTAATTTAGGCGAATTTGGC
GAAATATTCaaccaaaattgaaataattgctGGCTCTGGCTTTCAGTGTA
AAGAAACTGATTTGCCATACCATTCGCCAAacttagttctcgccaaaaat
AAAATTGCGTTTCTCGTCaaaatcatttctttttaaaaaatttctggaTA
CTGTTTTCCGATACCCTTCACACGTATTGATTTCTCTAGAATGGTGGCTT
TTAGGCTACGccatcttccttcgtttcgagcgtaaaactcctactcttcg
ggatatgctcactgctcttgttttgaatatttctccgaatacatcgcatg
cgcactgaggttgtAAAGGAACAAtcgagagtttcgaaacctaaaccaat
cagctgtgtttccaacattcttttatttgaaacctctattgataaacatc
ttttgttaaagttttctattatttttaaacCTTGTAATAAGCGAATttcc
ggtgggggtcactagttgCCTcccatagcagtgcctatagaccaagagta
aggcctaaaagcctgtagctgtctattgtgtagactaggttGCTTTTCAA
TCACAAGATAATTATGATATAtcattgattttcaaattcttgtttGCATA
TCTTTTCAGATACTTACTGAAGTTCGGCACAGTATCATACTACTTAGGTT
ACAACGCAATGCAGGATTTCTTTCCAACAATGACTATGAAACCCAACCCG
CATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTACCAGGTGAG
CCAAAGCCAcccccccGTCCCCTAGAAAGGAGGGTACttaaaatcttcca
aaaataggccttatcggagtttttgatttttctaaaaaatcgatgtattg
tgggattgtttcgagtgtattacaatagaaatctcttaggaattcctcga
gggaattctattgtaatacactcgaaacaatcccacaatgcatcgctttt
atAGAAAAATCGAGGTCTATTACTAAAAGGCAGGGTAAAGAATTTTGAAG
AGGTGAACAAAACAAACTGTACCAAAGattgttatttttgaaaatctgtc
cTTTTGGGATCaaaaaaaGCTGGAATGGAttttttttGGGGTAGGTACAT
TATACACTAAGTGGAGATTTAAGTTGTAAAATTATTAAGGTATGGGTGGA
TTTTTCAGGGAAACCCAACTACGCACAAAGGGGAGTGTTTCTACGGAAAC
TGTAATTTTTCAACAGAATGCTATGATAGAAAAGAAATacgccatttcac
agtcgaaatgaatcatgggtaatcaggaccaccaCGCTCCGATAACGACT
TTCAATTGGTCTAAATTTTAGAatgtttttgcgtctagccaacgaAAAGC
TGTTATGGAGGTGCAATCATTCCTGATTATCCATGATTCATTTAGACTGT
AAAATGGCCTATAAAGTCCTTTAATATCCTTTTCTAACTTTTAAacataa
aacttttttattcttaaCTTTACCTCACAGGAGAAGTTAGCAACACAACC
GAAGGAAGAAGACGTTaaagaaactgaagaagaagaaattgttCACGAAG
ATAATGAATGGGGTATGTAAAGTCTACTTCACTAGCAGGGAACAATAGCA
AAGACTGTAATACTTTCGTTATAGTTTGTATTTGAATAACATTCTTCTGa
tcgttgaaaatatttttgtaagacCTTTGAAGTAAACCATTTTTCCTATG
TCTATAAATATTAATCTGTGAGTTCCCATGCGGTTTATTTTAAACATGGC
AAACTGCTTCTTTGTCTGTACACCCAGTATCTACAGCTAACtccaaaatt
cattgccgtagggGATAAACGTCCTccgtactacgaagcgataaacgtga
gatacactctggtacataGTAACTGCTTCTATGCTTGGTGTTTAATAGGA
TTTTTAATGGTATTAAAAATCTTTCCGAAGATAGTTAAAGAagactcttt
ctccctggattgctctacCTACCCTTAATCATTCTCTTAGTTGctaagca
tcaagcagagaggcgtcaaagtaccattttgggaatctttggtatgatcc
ggctgggggtcgaacccacaaccttgcgcaccgtagccgggtgctctacc
actgcactacggtctgAATAAACTGAAACATATTTAATGTACCTTTTACT
TGCACTTTTTAATCACCATAGGTATTTCATTGGTCGACGAGTCATCCGAT
TTACGGGAGGACACACAACTACAAGAATTGACTACTGGACTTTCGTACGC
ATATACTAAACCTGCAGTGAGTCCTTTCTATGTATTAATGCTGACAAGCT
TGATAAGATACTAccatttttaataatttattttacaAGCGAAATGCTTT
GTCAAGAGACacaattcagttttttttctaacAAGCAAGTTTTAAAGTGT
ATGAAAtgataaacaaaatttaaaCCTTTCCATATTATGTAACCTTTTTC
AACGGaaaaaaggccaaagccaaaatctccaactaaaatccaattaaaaa
tGTCGATGATGTTATTAGCCCTGGGTTCGAGGGTGGGTTCTTTGTTTTGT
AAAATTCATGATATctaccattgcaatgtcttccaagtACCCAttagctg
attggttaaaagtgacgtaaaaagacgaaattgattgattttacgtcact
tacaaccaatcagctgttgggtctttAATGTAATgtaagaagacattgca
atggtgcatattatgaataggGACCTTTAGCATCTAGGACGGCAGGATTG
AACAAAAATGCCCTTGGGATTGATATGTGGATCGCAGCtagattctattc
ttttcatatcaattttctcatgagaatagtgaattttaatagggtaattt
tcaaatctcaagacgatatgaaaattcttttctgaCGTCGTCTTTGAGAA
GATGGTAAAGGAAGAGTGCAATAGTTTTTAATGATATGAATCACTAGAGA
ATTATAACGTGAtctacaaaaaaattgactataTTTCAAATTATAGTTAA
TTCTAGATAAAATCGGATAAAATTTGCCGTTTGATTTAAGATTTACTTCA
CGTCCCTAAAGGTCCCTAATATTGTGTCCGTTACAGACGGAAATTTGATC
CGAAGATCTTATATTTTCGGACAGAGCTTGTTTTTTCGGAAAATGAAGTT
AATTCCAGACTTCTTTTAAGATGTCTTACTTTGAAATATCAACCGAACTC
TAAAGCAAAAACTAGAGCGTACATTTctatggaaatttggaaagtttttc
tGGGTAGTGAGAAAGTTGAGTAGCATTACAGTACCTTTTATATAAGTTCT
ATAAGTTCTTTCTTTATCCCATAGGAAACAACAGAAGAACAGACTGAACC
AGCCTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAGTCTAGAGG
ATTTAATGAGACAGATGAAACaaatttagttcttttttagatttaattta
cgaaaaaatcttcttttttaatttttttaagggggttgggtctcttcttt
attttttttgcaaaaatcaacaGAAGCGAGGCGTGATCTTCTAGCTTTGA
CCAATTCATACCTTTTTcgtcaaaaagtctttgaa Coding sequence (CDS) from alignment at sc0000109_pilon:21501..25585+ >MSTRG.13594.1.p1 ID=MSTRG.13594.1.p1|Name=MSTRG.13594.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2295bp|location=Sequence derived from alignment at sc0000109_pilon:21501..25585+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAATTGTTGCTGGTTTCCTCGTACAAAATACACTAAAATACTTACT
GAAGTTCGGCACAGTATCATACTACTTAGGTTACAACGCAATGCAGGATT
TCTTTCCAACAATGACTATGAAACCCAACCCGCATTGTGATGAAAGTTTC
TGTCTCAAACGACAACAAGCGTACCAGGAGAAGTTAGCAACACAACCGAA
GGAAGAAGACGTTaaagaaactgaagaagaagaaattgttCACGAAGATA
ATGAATGGGGTATTTCATTGGTCGACGAGTCATCCGATTTACGGGAGGAC
ACACAACTACAAGAATTGACTACTGGACTTTCGTACGCATATACTAAACC
TGCAGAAACAACAGAAGAACAGACTGAACCAGCCTCTACGACTTCAACGA
CCGAAGAAGGTGGCGAACAAAGTCTAGAGGATTTAATGAGACAGATGAAA
CaaatttagATGGGAATTGTTGCTGGTTTCCTCGTACAAAATACACTAAA
ATACTTACTGAAGTTCGGCACAGTATCATACTACTTAGGTTACAACGCAA
TGCAGGATTTCTTTCCAACAATGACTATGAAACCCAACCCGCATTGTGAT
GAAAGTTTCTGTCTCAAACGACAACAAGCGTACCAGGAGAAGTTAGCAAC
ACAACCGAAGGAAGAAGACGTTaaagaaactgaagaagaagaaattgttC
ACGAAGATAATGAATGGGGTATTTCATTGGTCGACGAGTCATCCGATTTA
CGGGAGGACACACAACTACAAGAATTGACTACTGGACTTTCGTACGCATA
TACTAAACCTGCAGAAACAACAGAAGAACAGACTGAACCAGCCTCTACGA
CTTCAACGACCGAAGAAGGTGGCGAACAAAGTCTAGAGGATTTAATGAGA
CAGATGAAACaaatttagATGGGAATTGTTGCTGGTTTCCTCGTACAAAA
TACACTAAAATACTTACTGAAGTTCGGCACAGTATCATACTACTTAGGTT
ACAACGCAATGCAGGATTTCTTTCCAACAATGACTATGAAACCCAACCCG
CATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTACCAGGAGAA
GTTAGCAACACAACCGAAGGAAGAAGACGTTaaagaaactgaagaagaag
aaattgttCACGAAGATAATGAATGGGGTATTTCATTGGTCGACGAGTCA
TCCGATTTACGGGAGGACACACAACTACAAGAATTGACTACTGGACTTTC
GTACGCATATACTAAACCTGCAGAAACAACAGAAGAACAGACTGAACCAG
CCTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAGTCTAGAGGAT
TTAATGAGACAGATGAAACaaatttagATGGGAATTGTTGCTGGTTTCCT
CGTACAAAATACACTAAAATACTTACTGAAGTTCGGCACAGTATCATACT
ACTTAGGTTACAACGCAATGCAGGATTTCTTTCCAACAATGACTATGAAA
CCCAACCCGCATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTA
CCAGGAGAAGTTAGCAACACAACCGAAGGAAGAAGACGTTaaagaaactg
aagaagaagaaattgttCACGAAGATAATGAATGGGGTATTTCATTGGTC
GACGAGTCATCCGATTTACGGGAGGACACACAACTACAAGAATTGACTAC
TGGACTTTCGTACGCATATACTAAACCTGCAGAAACAACAGAAGAACAGA
CTGAACCAGCCTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAGT
CTAGAGGATTTAATGAGACAGATGAAACaaatttagATGGGAATTGTTGC
TGGTTTCCTCGTACAAAATACACTAAAATACTTACTGAAGTTCGGCACAG
TATCATACTACTTAGGTTACAACGCAATGCAGGATTTCTTTCCAACAATG
ACTATGAAACCCAACCCGCATTGTGATGAAAGTTTCTGTCTCAAACGACA
ACAAGCGTACCAGGAGAAGTTAGCAACACAACCGAAGGAAGAAGACGTTa
aagaaactgaagaagaagaaattgttCACGAAGATAATGAATGGGGTATT
TCATTGGTCGACGAGTCATCCGATTTACGGGAGGACACACAACTACAAGA
ATTGACTACTGGACTTTCGTACGCATATACTAAACCTGCAGAAACAACAG
AAGAACAGACTGAACCAGCCTCTACGACTTCAACGACCGAAGAAGGTGGC
GAACAAAGTCTAGAGGATTTAATGAGACAGATGAAACaaatttag
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000109_pilon | genome | sc0000109_pilon:21501..25585 + |
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