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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:1042378..1045696+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13578.34.p1 ID=MSTRG.13578.34.p1|Name=MSTRG.13578.34.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3319bp|location=Sequence derived from alignment at sc0000108_pilon:1042378..1045696+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTAGCCAAGTTAATGGATAGTAGACTGAATACGAAGGCTAATAAAGAT
GAAATGGATGGtatgttttatttgtttttttttttgcaaaaagtgaATCA
AACGAACAAGAAAGGTCGACAACCGCAACTACCCCAAGAAACTCTACCTT
CGTTTATTATGTACGAGAAGTTAGGAGGCTTCGTCACTCTACAACACCCT
TTTGAAGTGAAAGTGATCTTAATAAAAACTTTGACGTCGCTCAAAATAGC
TGACACGTTgattttcattcttctttttttttatctagaaTTGTCCACAG
TGATGGATTCGAAATTGACGTTGAAAGCTGACATGTGCCAAATTGATGGT
AAAGTTATACCACAAAAATTTGTTAtgtttgtcaaatgtttttcctcCTC
TTTTGAGGTGGTCTGCTAGcaacttttttcatcaaaaatcagATTTCAAA
TGTATCTAGtcgatgaaaaatgtttcaagtgtTCCGAGACCTTTACAAAT
TTCCTCTGTAATCTACACgaagtttatttttattcttttaacgGAATATT
GCTGAATAAGAAGGCCTTTTCtgataaatataaattttgaacctaccccg
gtggggtggaggtcctataaattaacctgtgttcgctCGTCCGGCCGTCC
GTTCGTTTGTTACCAACTTtcctcaggattgaatcataggaatcttttga
tttttggtaaaaaaggCGCAAAAtggtgatggccaaaatgtgacggagcc
tgattttcaacaaaaaaaattttgggcaaataaaacggctaaaaaacggg
ttttttgcactttgtgaaaaattggatcattaattttttcggattttttg
catgaaagtagggtaccatcataggtaaaagatggttcaagcagaatttt
gcaaacaaattttgttggctcaaaaaacgcatgtttatctataagaatca
ctattaataggcatacatcaatattcttagtcaaattactcaatttttta
tgagatagatgttgtttttgctcatgagggcttacttttgaagagtatgt
gtgtttagacatgaaattttggctgcttgacgtatttttatataaaaact
ggccaaattcaatatctttttataagcacattatcaataaTTACTTAGGT
AATAGCTTTTCtaaagattggctctttcattatttatgattttttgcaca
aagatgcataactataaaccctcgaatgtgacggagcccgattttcgaaa
tagtatttttgggcaaatttgggccaaaaaacggctaaataAATgggttt
gattttttgcatgaaagtaggtaaaagatggctcgagtagatttttgtga
aaaaaagaatatttcaagagcatgaaattttggtttcttaacgtttttct
ataagaaacaaacgactaattttaatagatcgtcactatttgttcTGAAT
AATtatttaatggtcacgctcacgtagatatcaattatatatgtgttaaa
tgcataaccaggtaggtccataaaagtatcacttgttttttacAGAATTG
AGCAACAAAGTTGACCAGCTATCAATGGAATCAAAATCTGTAAAGGGTAA
AGCTTTAGctatgatttttattttctctatCCATGCTTAACCCTAATCGt
actaaggggggggggctgcttctgttcggaggtcaaattaatGGTagtag
ctcctgaaataatagaacTTTTGcgatgaaattttctgtaaattcctaac
ttttatttagcttcgaaataaaaaaaattttgaaacctaaaaattttcac
acaaaATTAACACTGTTCcaatataaatttatttttatgtcaaatataac
gtttaaactgtaatttattgaatatttaggatataATAAGCAATTTAGAC
TCAGCCaactttttctaaagcctttgtgaATACATtggctatttataaga
acaaaggaaattttaagctttttctcACTGtaggcatgatgagtgacgtc
atcaaaaagattttttgtcaaaagttgccttttAATGACAACGTTCTTGt
atgccaaatttcattcaaaaagacccactagatcaaaagataggggtggt
acaggaaaagcccctcccccctagttttgaactgcccctaaaagcctagt
aagAATAGGGTTAAACCTGAATTTATTCAAAGAAACATTATATGTTATTT
ATTCCTTCTAGATACAACAAAgagacattggaatttaccagAGCCTGTTT
CCATCTTCTTTGGACGAGAAAGTTTGATTGAATCCATTCACTTGAAActt
caacaaaatcaaacaattgCTTTGAGTGAAATGGGAGGTGTGGGAAAAAC
ACAAACTGCTGCAAAGTTCGTTCAAATGCACAAGGATGAATATCAGAAGA
TATTTTGGATTTCTGCTGTCAGCCTCAAGAAATCTTTGAGCGAGATTTTG
TGTGCATTTGGTTGTAAACAACTAATACCTGATGAACCTTCGATGGAAAC
TCTGACTTTCATTTTCCTCTCTAAGATTTGTGAAGGCTCCAAAAAATCGC
TGGTTGTATTGGATGACTTCACTGAGGTCATAAAAGACGTCACTTCATTT
ATTCgaaatatgaaagaaaaaatcagctTATTGTTGACATCTCAATTGAA
AGATTGGGAAGATTATGGCTTGATTCAAATTGCTGTTCCATGTTTCCAAG
AACAAGAATCCATTGGCTTCTTACAGAATGAACTTTCTGCAGCCAGCCAA
CATGAAATCTCCATTTTAGGGAATCGTTTACAATCATTACCTTTAGCCCT
TCACCAAGCCATTTGTTACATCAAAAAACATAAAGTTCCTCTACACAAAT
ACATCGAACAATTTGAAGCATGCAGAGAAAGTGTTTTGGGAATGAAAATC
AATTCCTTTACTGAATATGACAAAACATTGTTGACAGTTTGGGATTTGGC
TTTTGCGAAGATTCGGGTCGAATCAAAGAATGCTCTTTTGATCTTGGGAA
TGATGGCTTTCATGGACAAtcgaaaaatcaacaaaaacacatTCAGCTAT
TTTGATAAAGTTGACGAATTTGAATTAAATGAAATCATCTCACTGCTTTG
TCAATATTCATTGGTCAACGAGCGGAATGATTGTTTAGAAATTCACAGTC
TTGTGCAAAAAGTTATCCGATATCGTATTGAACAAAATCAATTTGTCGAG
GGTGAATGTCCGTTGACACTGCTTGAAgttgttcttttgaaaatagaggt
ttcttttaaagatttgttTGCAAATGGTGACCACGAGGATTTATGGTACA
TTCATGTTTTTCGTTTGAT Coding sequence (CDS) from alignment at sc0000108_pilon:1042378..1045696+ >MSTRG.13578.34.p1 ID=MSTRG.13578.34.p1|Name=MSTRG.13578.34.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5100bp|location=Sequence derived from alignment at sc0000108_pilon:1042378..1045696+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAGCCAAGTTAATGGATAGTAGACTGAATACGAAGGCTAATAAAGATGA
AATGGATGaaTTGTCCACAGTGATGGATTCGAAATTGACGTTGAAAGCTG
ACATGTGCCAAATTGATGAATTGAGCAACAAAGTTGACCAGCTATCAATG
GAATCAAAATCTGTAAAGGATACAACAAAgagacattggaatttaccagA
GCCTGTTTCCATCTTCTTTGGACGAGAAAGTTTGATTGAATCCATTCACT
TGAAActtcaacaaaatcaaacaattgCTTTGAGTGAAATGGGAGGTGTG
GGAAAAACACAAACTGCTGCAAAGTTCGTTCAAATGCACAAGGATGAATA
TCAGAAGATATTTTGGATTTCTGCTGTCAGCCTCAAGAAATCTTTGAGCG
AGATTTTGTGTGCATTTGGTTGTAAACAACTAATACCTGATGAACCTTCG
ATGGAAACTCTGACTTTCATTTTCCTCTCTAAGATTTGTGAAGGCTCCAA
AAAATCGCTGGTTGTATTGGATGACTTCACTGAGGTCATAAAAGACGTCA
CTTCATTTATTCgaaatatgaaagaaaaaatcagctTATTGTTGACATCT
CAATTGAAAGATTGGGAAGATTATGGCTTGATTCAAATTGCTGTTCCATG
TTTCCAAGAACAAGAATCCATTGGCTTCTTACAGAATGAACTTTCTGCAG
CCAGCCAACATGAAATCTCCATTTTAGGGAATCGTTTACAATCATTACCT
TTAGCCCTTCACCAAGCCATTTGTTACATCAAAAAACATAAAGTTCCTCT
ACACAAATACATCGAACAATTTGAAGCATGCAGAGAAAGTGTTTTGGGAA
TGAAAATCAATTCCTTTACTGAATATGACAAAACATTGTTGACAGTTTGG
GATTTGGCTTTTGCGAAGATTCGGGTCGAATCAAAGAATGCTCTTTTGAT
CTTGGGAATGATGGCTTTCATGGACAAtcgaaaaatcaacaaaaacacat
TCAGCTATTTTGATAAAGTTGACGAATTTGAATTAAATGAAATCATCTCA
CTGCTTTGTCAATATTCATTGGTCAACGAGCGGAATGATTGTTTAGAAAT
TCACAGTCTTGTGCAAAAAGTTATCCGATATCGTATTGAACAAAATCAAT
TTGTCGAGGGTGAATGTCCGTTGACACTGCTTGAAgttgttcttttgaaa
atagaggtttcttttaaagatttgttTGCAAATGGTGACCACGAGGATTT
ATGGTACATTCATGTTTTTCGTTTGTTAGCCAAGTTAATGGATAGTAGAC
TGAATACGAAGGCTAATAAAGATGAAATGGATGaaTTGTCCACAGTGATG
GATTCGAAATTGACGTTGAAAGCTGACATGTGCCAAATTGATGAATTGAG
CAACAAAGTTGACCAGCTATCAATGGAATCAAAATCTGTAAAGGATACAA
CAAAgagacattggaatttaccagAGCCTGTTTCCATCTTCTTTGGACGA
GAAAGTTTGATTGAATCCATTCACTTGAAActtcaacaaaatcaaacaat
tgCTTTGAGTGAAATGGGAGGTGTGGGAAAAACACAAACTGCTGCAAAGT
TCGTTCAAATGCACAAGGATGAATATCAGAAGATATTTTGGATTTCTGCT
GTCAGCCTCAAGAAATCTTTGAGCGAGATTTTGTGTGCATTTGGTTGTAA
ACAACTAATACCTGATGAACCTTCGATGGAAACTCTGACTTTCATTTTCC
TCTCTAAGATTTGTGAAGGCTCCAAAAAATCGCTGGTTGTATTGGATGAC
TTCACTGAGGTCATAAAAGACGTCACTTCATTTATTCgaaatatgaaaga
aaaaatcagctTATTGTTGACATCTCAATTGAAAGATTGGGAAGATTATG
GCTTGATTCAAATTGCTGTTCCATGTTTCCAAGAACAAGAATCCATTGGC
TTCTTACAGAATGAACTTTCTGCAGCCAGCCAACATGAAATCTCCATTTT
AGGGAATCGTTTACAATCATTACCTTTAGCCCTTCACCAAGCCATTTGTT
ACATCAAAAAACATAAAGTTCCTCTACACAAATACATCGAACAATTTGAA
GCATGCAGAGAAAGTGTTTTGGGAATGAAAATCAATTCCTTTACTGAATA
TGACAAAACATTGTTGACAGTTTGGGATTTGGCTTTTGCGAAGATTCGGG
TCGAATCAAAGAATGCTCTTTTGATCTTGGGAATGATGGCTTTCATGGAC
AAtcgaaaaatcaacaaaaacacatTCAGCTATTTTGATAAAGTTGACGA
ATTTGAATTAAATGAAATCATCTCACTGCTTTGTCAATATTCATTGGTCA
ACGAGCGGAATGATTGTTTAGAAATTCACAGTCTTGTGCAAAAAGTTATC
CGATATCGTATTGAACAAAATCAATTTGTCGAGGGTGAATGTCCGTTGAC
ACTGCTTGAAgttgttcttttgaaaatagaggtttcttttaaagatttgt
tTGCAAATGGTGACCACGAGGATTTATGGTACATTCATGTTTTTCGTTTG
TTAGCCAAGTTAATGGATAGTAGACTGAATACGAAGGCTAATAAAGATGA
AATGGATGaaTTGTCCACAGTGATGGATTCGAAATTGACGTTGAAAGCTG
ACATGTGCCAAATTGATGAATTGAGCAACAAAGTTGACCAGCTATCAATG
GAATCAAAATCTGTAAAGGATACAACAAAgagacattggaatttaccagA
GCCTGTTTCCATCTTCTTTGGACGAGAAAGTTTGATTGAATCCATTCACT
TGAAActtcaacaaaatcaaacaattgCTTTGAGTGAAATGGGAGGTGTG
GGAAAAACACAAACTGCTGCAAAGTTCGTTCAAATGCACAAGGATGAATA
TCAGAAGATATTTTGGATTTCTGCTGTCAGCCTCAAGAAATCTTTGAGCG
AGATTTTGTGTGCATTTGGTTGTAAACAACTAATACCTGATGAACCTTCG
ATGGAAACTCTGACTTTCATTTTCCTCTCTAAGATTTGTGAAGGCTCCAA
AAAATCGCTGGTTGTATTGGATGACTTCACTGAGGTCATAAAAGACGTCA
CTTCATTTATTCgaaatatgaaagaaaaaatcagctTATTGTTGACATCT
CAATTGAAAGATTGGGAAGATTATGGCTTGATTCAAATTGCTGTTCCATG
TTTCCAAGAACAAGAATCCATTGGCTTCTTACAGAATGAACTTTCTGCAG
CCAGCCAACATGAAATCTCCATTTTAGGGAATCGTTTACAATCATTACCT
TTAGCCCTTCACCAAGCCATTTGTTACATCAAAAAACATAAAGTTCCTCT
ACACAAATACATCGAACAATTTGAAGCATGCAGAGAAAGTGTTTTGGGAA
TGAAAATCAATTCCTTTACTGAATATGACAAAACATTGTTGACAGTTTGG
GATTTGGCTTTTGCGAAGATTCGGGTCGAATCAAAGAATGCTCTTTTGAT
CTTGGGAATGATGGCTTTCATGGACAAtcgaaaaatcaacaaaaacacat
TCAGCTATTTTGATAAAGTTGACGAATTTGAATTAAATGAAATCATCTCA
CTGCTTTGTCAATATTCATTGGTCAACGAGCGGAATGATTGTTTAGAAAT
TCACAGTCTTGTGCAAAAAGTTATCCGATATCGTATTGAACAAAATCAAT
TTGTCGAGGGTGAATGTCCGTTGACACTGCTTGAAgttgttcttttgaaa
atagaggtttcttttaaagatttgttTGCAAATGGTGACCACGAGGATTT
ATGGTACATTCATGTTTTTCGTTTGTTAGCCAAGTTAATGGATAGTAGAC
TGAATACGAAGGCTAATAAAGATGAAATGGATGaaTTGTCCACAGTGATG
GATTCGAAATTGACGTTGAAAGCTGACATGTGCCAAATTGATGAATTGAG
CAACAAAGTTGACCAGCTATCAATGGAATCAAAATCTGTAAAGGATACAA
CAAAgagacattggaatttaccagAGCCTGTTTCCATCTTCTTTGGACGA
GAAAGTTTGATTGAATCCATTCACTTGAAActtcaacaaaatcaaacaat
tgCTTTGAGTGAAATGGGAGGTGTGGGAAAAACACAAACTGCTGCAAAGT
TCGTTCAAATGCACAAGGATGAATATCAGAAGATATTTTGGATTTCTGCT
GTCAGCCTCAAGAAATCTTTGAGCGAGATTTTGTGTGCATTTGGTTGTAA
ACAACTAATACCTGATGAACCTTCGATGGAAACTCTGACTTTCATTTTCC
TCTCTAAGATTTGTGAAGGCTCCAAAAAATCGCTGGTTGTATTGGATGAC
TTCACTGAGGTCATAAAAGACGTCACTTCATTTATTCgaaatatgaaaga
aaaaatcagctTATTGTTGACATCTCAATTGAAAGATTGGGAAGATTATG
GCTTGATTCAAATTGCTGTTCCATGTTTCCAAGAACAAGAATCCATTGGC
TTCTTACAGAATGAACTTTCTGCAGCCAGCCAACATGAAATCTCCATTTT
AGGGAATCGTTTACAATCATTACCTTTAGCCCTTCACCAAGCCATTTGTT
ACATCAAAAAACATAAAGTTCCTCTACACAAATACATCGAACAATTTGAA
GCATGCAGAGAAAGTGTTTTGGGAATGAAAATCAATTCCTTTACTGAATA
TGACAAAACATTGTTGACAGTTTGGGATTTGGCTTTTGCGAAGATTCGGG
TCGAATCAAAGAATGCTCTTTTGATCTTGGGAATGATGGCTTTCATGGAC
AAtcgaaaaatcaacaaaaacacatTCAGCTATTTTGATAAAGTTGACGA
ATTTGAATTAAATGAAATCATCTCACTGCTTTGTCAATATTCATTGGTCA
ACGAGCGGAATGATTGTTTAGAAATTCACAGTCTTGTGCAAAAAGTTATC
CGATATCGTATTGAACAAAATCAATTTGTCGAGGGTGAATGTCCGTTGAC
ACTGCTTGAAgttgttcttttgaaaatagaggtttcttttaaagatttgt
tTGCAAATGGTGACCACGAGGATTTATGGTACATTCATGTTTTTCGTTTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000108_pilon | genome | sc0000108_pilon:1042378..1045696 + |
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