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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:1034445..1042725+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13578.24.p1 ID=MSTRG.13578.24.p1|Name=MSTRG.13578.24.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8281bp|location=Sequence derived from alignment at sc0000108_pilon:1034445..1042725+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTCATTGATGTACTTCACAACGTGCACAATGACACTTCTTATACTGGAC
TTCCAACTTGTCCAAAACAACTTCATCAAATATTCGTGCGAGAGAGATGT
ACCATCCCACATGGGGAATTGGCCCAACCCCAGGACAGCATTCACTATCT
TGGGATAGGGAAATCATCGCGCTTATCAGACTCTGCCGATCCTATGTTCG
CGACACACAGAACCGATGGTGTATAGCAACGATACTCGATCAGGACGGGA
GAACCATGCGTTCTCACAAGTCTGACCCTATGAATTTCGTCACCACACCA
CATTGCCTGATATATCtccccacactcttgtatcagagtagtggtaccca
attcccctcacatggcatgggttgacccgggcgaaggtgcattcacttgc
caagtgaatcgtagtgacACGGTGGGTATCAAActcgggcctcccaggcg
ggagCCAAGGATGATAACCACCATACCACTACGCCTTTTATATTCGTGCA
ATGCAAACAAAACAAGAAACACGAGTTGAACAAAGTGTTGAAGAAAGAAC
AATGGGAAATATTGTGTCCACAAAATGGATCAACCAACCCAGAAGATTGG
GATATCACCTTACTGATTGCTGTGTTGAGGTCCGTGGTTGGATTGCAACC
TGCTGGAGGATGGAAAATCAAATCTCTTCAACACAACGATCAATCTATTG
GAGCTTTCTTGTTTTTAATcagaaatttaagaaatgaaTTAATGCATGGT
TCAGTCAATGCAGTACCAAACTTACAAGCTTCCAAGAAACTGAGAGCTCG
AATGGAGAACATTTTACTGGGATTGAAATATAAGAATATGCAAATGTTTT
ATGATTTGGAAAGTTGTTCATTGGATAAACATGTGTTGGTTATTTCTCGA
ATGGTCACCAATTTGGATCAAGAAGTGGATTTGTTGCGAAATGAAGCGAG
CGATAATTCGAATGCTATCAAAAATATCGAACAAACTAATCAATGGATCA
AAACTTATTTGAAACAATTATCTTCGGCAAAAGCTGACAAAACTGACGTC
GAAGGTGAGTTGCAATGGTTTTAATGTCGTCGAAAACACATTTACTTTCT
TAACTCTTTTGAAGTCTTTGCAATGTAGGAGCTAAATCTTGTTAACTTTT
TACCTCTGCCCACTGATTTTTGTGTTCATTGAATAACACAATTTGTTTTA
CTTTAGATTTAGCCAagtcaatgaaaatgaaagctgATAGAGTTGAAATG
GAtggtatgttttttatttttcttgtttagttcttttaactctggaattt
ttctgtctgaataggcattttctgataaatatcactattttctttacttt
agaTCTAGCCAAGTCAATGAATATGAAAGCTAATAGAGATGAAGTGGACg
gtttgttttatttctttacCTGTTTTATATTTTAGATGAAATGGTAACTA
CCCTCAAAAGCCTATCTGATAATTGTTTAATAAAGATTAGGAGGGATCGC
CAAGTTGACGTTCTAAATGAAATTTATCCTTATAATAAATATTGATTTAT
TCTTGTTATCTATCTTATAGTTTTTCGACTTTTTCTATAAGATATAAGAA
ATCTTTTGTAATACCTAATTCTACCTAACGCCTAAGAATTTTTACTTTAG
GTTTAGCCAAGTCAATGGATATAAAAGCTGATAGAGTTGAAATGgatggt
atgttttttttatttaaaccatttgcaaaaaagtgaaacgagTGTTCCGA
GACCTTTACCTCTGTTTAGTCTAAACAAAgtttgttttattcttttaaag
AAATGTTGCTGAATAAAAAGGTATTTTCTGATAGATATCAATTATTTTAA
CAGAATTGAGCAGCAAAGTTGACCAGCTATCAATGGAATCAAAATCTGGA
AAGGGTAAAGCGTTagttatgatttttattttctctacCCATGCTTAAAC
TTGAATTTATTCAAAGAAACTTTATTTAATATTTGTTatccttcttttgt
attccttCTAGATACAACAAAGACACATTGGAATTTGCCAGAGCCTGTTT
CCATATTCTTTGGACGAGAAAGTTTGATTGAATCTATTCACTTGAAACTT
CAACAAAATCAAGCAATTGTTTTGAGTGAAATGGGAGGTGTGGGGAAAAC
ACAAACCGCTGCAAAGTTCGTTCAAATGCATAAGGATGAATATCAGAAGA
TATTTTGGATTTCTGCTGTCAGCCTCAAGAGATCTCTGAGCGAGATTTTG
TGTGCATTTGGTTGTAAACAACTAATAGCTGATGAACCTTCGATGGAAAC
TCTGACTTTCATTTTCCTCTCTAAGATTTGTGAAGGCTCCAAAGGATTGC
TGGTTGTATTGGATGACGTCACTGAGGTCACAAAAGACGTCACTTCATTC
ATTCGaaatgtgaaagaaaaaatcagctTATTGTTGACATCTCAATTGAG
GGATTGGGAAGATTATGGTTTGATTCAAATTGCTGTTCCATGTTTCCAAG
AACAAGAATCCATTGGTTTCTTACAGAATGAACTTACTACAGCCAAACAT
CGAGAAATCTCCATTTTAGCGAATCGTTTACAATCATTACCTTTAGCCCT
TCACCAAGCCATTTGTTACATCAAAAAACATAAAGTTCCTCTACACAAAT
ACATCGAACAATTTGAAGCATGCAGAAGAAGTGTTTTGGGAATGAAAATC
AATTCCTTTACTGAATATGACAAGACATTGTTGACAGTTTGGGATATGGC
TTTCGCGAAGATTCGGGTCGAATCAAAGAATGCTCTTTTGGTCTTAGGAA
TGATGGCTTTCATGGACaatcgaaaaatcaataaaaaaacattcagttat
tttgataaagttgATGAATTTGAATTAAATGAAATCATCTCACTGCTTGG
TCAATATTCATTGGTCAACGAGCGGAACGAATGTTTAGAAATTCACAGTC
TTGTGCAAAAAGTTATCCGATATCGTATTGAACAGAAACAATTTGTTGAG
GATGAATGTCCGTTGACACTTCTTGAAGATGTTCTTTTGAAAATCGAGGT
TTCTATTAAAGATTTGGTTGCAAATGATGACTACGAGGATTTATGGTACA
TTCATGTTTTTTGTTTGATCATGAGTGGTGCACTTAAAACTATCAACTTT
GATGTTACCCGGGTGTTAAATATCGCCACAGGCAGAATGGAGATGGAGAA
CTTATACCAAATTTCTGAACTTCTTTCAAAAGTGTTGTTAAAACAATATA
GGTTGTTTCGAGATGTGAAAACTTTTGATATGCTGTTGCATTGTCATCAA
CATTTCATAAACGCGTCAAGGCAGTTAGGTTTACTTAATTTGAATgagat
ttttgcttttgaagaaGAGTTTTCCACAGAACTTGAAGAACATTCTTTAG
AAGTTTACCAGTGGAAGTTAAAGCAAGCTGATGTATATAATATACATGGA
AGAGCGTTGTTATGCAATAATATCGTTCGAAATTTATTCAATGAACTGGT
CAAGAAGAAAGGATTTGATGATATTAAATTAAGATTGGCGAGtttttttA
CTGTAAGTGATGTTGAAGCTTTGTTGAATTCCGTTGACACAAATAATCTC
AGTGACACGGACTTTCTGATATATTATCATGCAAAATGTTCTTTATACAT
CAAGAACGGTTGCTTTGATTTGGCTGAACAAGTCATGAAGAATTGGAAAG
AACACTTacacagaaaatgtttttctcgattATGGCActttaatttcaca
aaaaagaatTGCTTTTTACTTTACAAGAAAGGAAATTACAACGAAGCACT
ACTAGCTTGCGATGAACTTAAACGAGATTTTCTTATTAATGCAGATGTTT
TAATTTCGGAAGCATTGATTTTGATCAAATTGGGAAAGTTTAACGAAGCA
GAAGTGCTACTTGATGACTTTAACCAACGCAATAATGTAATTATCATTGA
AATCAGCTCATACCTGAAGTTTCGAAAGCACGACTTTGAGGCAGTAGAAA
ATCTCCTCACTGATTGGGAAGATGAGCGTCagtcaaatcttttgtttttg
gtAAAGGGATATGCGAAACTGCATCGACAACTCGAAAATGATAAATCGAG
AGAATTGGTTGAACAATGtttgcaaatgaaaaaaatggtaaataaattCT
TTCATGTACATTTGAATTcgatttgtttttgaaatgcaaTTTTATCAAAT
TGTGATTAGAATCGGATCTTTGGGAATTACTCCAACTTTTGGCAAAAGTT
TTTAACTGTTGACTGCAATGTAATTGTTGTATTGACTTGGCCTATAAAAT
CAGAAGTAGTGtttttttAGTATGAAAATATTCTAGGGGatggtttcagg
gggtacctgatTCCGCCATTCGGTCTAAATTTTCTCCATTATCCGTCACA
ATGTAAAGATCAAGTCCGTAATTCTACCACCGAAAATTTCctatgaaatt
gattttttctcgaaaattccagaattttgactttttggtgtAAATTCCGA
AATTTCGAACGGTTATTTGCCAAATTCCAtttttttGGACCAAAACAATC
CAATTTTTCGTCTTCGACAGTGGACCTAAATTCCACTAATCCGTCTAAAT
TTCTAAACGTCTTGAATTTTTGTGTTAAATTAGAGAAttaaatattatga
atagaATTATTGGTAAGCGAAATTTTTGGATGGCAACATTCCAAGGATAT
TTTGAACAAAGGCGGTTGTTTGGGAGCAattttatcattaatatatttta
gattgcaaataaaaattttgtatattttttaaaacaagatttAAATTCac
gattttctttgtttcttagCTGGTGGCCCAGCATCACCATGATTTTCTTC
tcttaataagaatatttttgtaagaacaatgaggcgatcgaaaataagaa
catttcaagaacagTTATatgccttaaatttcaaaattgtgataaaaaag
atcaaaacgAAAAGCATCTCAggggggggAGGGTAAGTGGAGGTACGGTA
TGTGATGTGGTATTTACCGCCCTTAAGGATGCCTTTTTGGAACCTGACAG
TCCCTGtaatggtttgaaaaatcagaaaaattaaatcTCAGTCCCATTAA
GGGTCGAAAAATGTTACccttaaaacatcaaaatttggtcaaattagtcc
caataagggtcgtaaaattcacaacattttctaatttttctctcttttag
gAGGGTCCGAGAATCGAAAGCCTGGTGGCACCCCCGTCATCCTGTAGACT
TAGTACCCCACCCTCCGTCCCGGGGAAATCATATCGattgataatatttt
ttacCTGTTAAGAACCGTCATAAAAGTGAACGTAGTGTTAAGACAAagtg
tttttgaaactttaatgAAATCTCTTAATTCTGAATAATGCAGTATATAC
ATTAGAAATTTTATTCCACTGTCTATGATAACCTTTTTACTAAACCTATT
TTATTAAATGTTTCCCAAaatgaccatagttttgaaactTAAATGTCATA
ATTTTCCTTTAGAATCTTTGAAGTTTATGGCCCCCTGAGTTAgcctttta
aaatgttttttgaaccGAAAGACGATCTCTGTTTTTTCAGAATTACATTT
GTtatgctttttatatttttcagcaaaaacaaaagattaagaaaataaaa
agaaataaatgaagAGAATGAGATGAGTACACCATTGTACATCCTCCAAA
GCGAGTATTGGGTTCGCATCAACCTCGCTTCGGAGTATTGTATCAAAGAA
GCGCTCATTGATGTACTTCACAACGTGCACAAAGACCCTTTTTATACTGG
ACTTCCAACTTGTCCAAAACAACTTTATCAAATATTCGTGCAATGCAAAC
AAGACAATAAACACGAGTTGAACAAAGTGTTGAAGAAAGAACAATGGCAA
ATATTGTGTCCACAAAATGGATCATCCAACCCAGAGGATTGGGATATCAC
CTTACTGATTGCTGTATTGAGGTCAGTGGCAGTGGTTGGATTGCAACCTG
CTGGAGGATGGAAAATCAAATCTCTTCAATCCAACGATCAATCTATTGGA
GCTTTCTTGTTTTTGATcagaaatttaagaaatgaCTTAATACATGGTTC
AGTCAATGCAGTACCAAATTTACAACAAGCTTTTCAAACAACTGAGATCT
GAATCGAATGGAGAACATTTTACTGGGATTGAAATACAAGAATATGCAAA
TGTTTTATGATTTGGAAAGTTGTCCATTGGATAAACATGTGTTGGTTATT
TCTCGAATGGTCACCAATTTGGATCAAGAAGTGGATTTGTTGCGAAATGA
AGCGAGCGATAATTCGAATGCTATCAAAAATATCGAACAACATAATCAAT
GGATGAAAACTTATTTGAAACAATTATCTTCGGCAAAAGCTGACAAAACT
GACGTCGAAGGTGAGATACAttggttttcaattttttcgaaaGCACATTT
ACTTTCTTACTTCTTTTGAAGTCTTTGTGTTGTAAGAGCTGAATCTTGTT
AAACTTATTACCAGTTGCCCCCAATTTTTGTGGTCATTGAGTAACAccat
catagtgtcctcccccctggattcaggggggggatgggttttgaggtcaa
aaggacgtataggggggaaagaattttttttgaagccagggtggGAAAAA
ACGagggggggggatggaaaattttcattctaggcatgggggggggatac
tcaccaaaatcaattcaaaattgaaaaacatctggttttatgagatgata
tagcataatgcttagttttattaatattatggtttgaaaacaaccatcct
ttccatttcttcttgaattagaactaccttagggaaaacaataagcgtta
agttcatcaaattatagcctggagatccatgttatgatttcttattctat
atactgatggcaaaatatatagcatggtacgggctgacagtttgaatttc
ccatatcctaataacggttgaaaacacagccaatcaaattctgttatcgt
ttcactggtcacactttcttaaagaaagtgcaagttccgaaatttaattt
ttattttagtaagtgaatacagcgctaaattcgaatttcccactgtaatt
tttttgaggccaaaatcggactcacagctctgacccgtcaagtattcatc
agattaaaaaaaaatacgcagacaGGTTCCTGTCtaatcaaattacagct
ttttaattttttgcttgagggggggggggacagagaaatttttggaggca
gggtggggaaaaatgaggggggggatggaaaattttcattctaggcatgg
gggggggaagagaccctgaaggacactatgacAATTTGTTTTACTTTAGA
TTTAGCCAAGTCAATGAATAGTGGACTGAATACGAAAGCTGATAAAGATG
AAATGGATGGTATGTTTGTTTCTTTACTTGTTTTATATTTCGGAGAAAAT
GGTATCTACCTGATGATTGTCTAATAAAAAGTAGGAGGCATCGCCAAGTT
GACGTTCTAAACAAAATTgctcctttttgaaaaatattgatttcttCTTG
TTATCTATGTTATAGTTTTTCGACATCCTCTGTAATATATAAGAAGCTTT
TTGTGATATATTTTCACTATCTTTCTGTCTGAATAGACATTTCCCGATAA
ATATCACTATTTGTTTTACTCTAGATTTAGCCACGTCAATAAATATGAAA
GCTGGTAGAGTTGAAATGGATGGTATGTTTTATTTCGTTTACTTGTTTTA
TATTTTGGAGAAAGTGAACAATTATCTTCTGCAAAAGCTTATAACAATGA
CGTCGAAGATGAGATAACATATTTATTTCCTGCCTCTTTTGAATTCTTTG
TAATGTAGGAGCTGAATATTGTTAACCTTTTTACTTCTTGACACTGATTT
TTTGGTCATTGAATAACACCATTTCTCCTCTAGATTTAGCCAAGTTAATG
GATAGTAGACTGAATACGAAGGCTAATAAAGATGAAATGGATGGtatgtt
ttatttgtttttttttttgcaaaaagtgaATCAAACGAACAAGAAAGGTC
GACAACCGCAACTACCCCAAGAAACTCTACCTTCGTTTATTATGTACGAG
AAGTTAGGAGGCTTCGTCACTCTACAACACCCTTTTGAAGTGAAAGTGAT
CTTAATAAAAACTTTGACGTCGCTCAAAATAGCTGACACGTTgattttca
ttcttctttttttttatctagaaTTGTCCACAGTGATGGATTCGAAATTG
ACGTTGAAAGCTGACATGTGCCAAATTGATG Coding sequence (CDS) from alignment at sc0000108_pilon:1034445..1042725+ >MSTRG.13578.24.p1 ID=MSTRG.13578.24.p1|Name=MSTRG.13578.24.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1296bp|location=Sequence derived from alignment at sc0000108_pilon:1034445..1042725+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATGGTTCAGTCAATGCAGTACCAAACTTACAAGCTTCCAAGAAACT
GAGAGCTCGAATGGAGAACATTTTACTGGGATTGAAATATAAGAATATGC
AAATGTTTTATGATTTGGAAAGTTGTTCATTGGATAAACATGTGTTGGTT
ATTTCTCGAATGGTCACCAATTTGGATCAAGAAGTGGATTTGTTGCGAAA
TGAAGCGAGCGATAATTCGAATGCTATCAAAAATATCGAACAAACTAATC
AATGGATCAAAACTTATTTGAAACAATTATCTTCGGCAAAAGCTGACAAA
ACTGACGTCGAAGATTTAGCCAAGTCAATGAATAGTGGACTGAATACGAA
AGCTGATAAAGATGAAATGGATGaaTTGTCCACAGTGATGGATTCGAAAT
TGACGTTGAAAGCTGACATGTGCCAAATTGATATGCATGGTTCAGTCAAT
GCAGTACCAAACTTACAAGCTTCCAAGAAACTGAGAGCTCGAATGGAGAA
CATTTTACTGGGATTGAAATATAAGAATATGCAAATGTTTTATGATTTGG
AAAGTTGTTCATTGGATAAACATGTGTTGGTTATTTCTCGAATGGTCACC
AATTTGGATCAAGAAGTGGATTTGTTGCGAAATGAAGCGAGCGATAATTC
GAATGCTATCAAAAATATCGAACAAACTAATCAATGGATCAAAACTTATT
TGAAACAATTATCTTCGGCAAAAGCTGACAAAACTGACGTCGAAGATTTA
GCCAAGTCAATGAATAGTGGACTGAATACGAAAGCTGATAAAGATGAAAT
GGATGaaTTGTCCACAGTGATGGATTCGAAATTGACGTTGAAAGCTGACA
TGTGCCAAATTGATATGCATGGTTCAGTCAATGCAGTACCAAACTTACAA
GCTTCCAAGAAACTGAGAGCTCGAATGGAGAACATTTTACTGGGATTGAA
ATATAAGAATATGCAAATGTTTTATGATTTGGAAAGTTGTTCATTGGATA
AACATGTGTTGGTTATTTCTCGAATGGTCACCAATTTGGATCAAGAAGTG
GATTTGTTGCGAAATGAAGCGAGCGATAATTCGAATGCTATCAAAAATAT
CGAACAAACTAATCAATGGATCAAAACTTATTTGAAACAATTATCTTCGG
CAAAAGCTGACAAAACTGACGTCGAAGATTTAGCCAAGTCAATGAATAGT
GGACTGAATACGAAAGCTGATAAAGATGAAATGGATGaaTTGTCCACAGT
GATGGATTCGAAATTGACGTTGAAAGCTGACATGTGCCAAATTGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108_pilon | genome | sc0000108_pilon:1034445..1042725 + |
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