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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:641215..645152+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13549.1.p1 ID=MSTRG.13549.1.p1|Name=MSTRG.13549.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3938bp|location=Sequence derived from alignment at sc0000108_pilon:641215..645152+ (Clytia hemisphaerica_ch_hm2_pilon)
aatgcaGGGAACCAAGATTTTGCAAATCAATTGACAAGTCTGATGATGTT
TGCTCCATCAGAGATGTTAAGTCGGTAGTTGGAGCCCTCTGTCCATTCAA
ATGCGGCACCTGCCCTGAAGGTAAGACCATTTATTAAAAAGCCACGAATT
TGAAACTTCTGaaacttatttcccatccagaacaggTGAGCCGTgtgttt
ttaaaacaaagtTTCTTAATGTGGGGCAAACTTAAGGTTTCGCtgtttct
tgcttgagaaaagttgaagattcctctctagcccctttggggcttcaaac
tcaacgGATAAAGGCCTGTATCCACTTGCGCGAGCtttgatcgcactttt
tcgagcaaagcttccacgctattggtcaaaagaaaaatgaagcaactcta
TTGGCGTGATCTGACGTAAtggttgaaaaaaagttttatttcgagcgcgc
gctacatttttatgacgtaatcttttttccaagcaaaaaggatcgaagcc
aaaaagtgcgatcgcagcgcgcgcaaatggagaccggccttaagactCAG
TGCAAAATCTAACCGTGACTTACTTTTCTTGATCAGAGTTACTGTTGGGG
AGGCCAAACACATGCTTAGGTCAAATCATAGTCCATATAAAAAACCCGCT
GGTCTGGAAGCCCATTGTTGTAattttttgttaactttttcctttgttaa
aatAGCGattataaaaatcgatttgctcagtttttgatcacgttgccaag
tactcctcttgggattggtttaagattttaatcacatgatcaaaaagtga
gcaaaacaaaataatttctcaacACAAGTTCAAATtcgaaacaatagaaa
gaaacaaaaggcttccagaccggggttttttcaCGGACTATggtcaaaat
gttcttaatcatCTAGATGTTGAAAATTACGTTGAAACGTCCGGTACACA
TGCACGACTGAACTTGATCGTaaaagaagatgaagaaaaagaagagaaag
aagacgaagaggaagaagaggaagaTGATAATTTCTGTgttcacttttat
tacaaagtaGAAAAGGCACAGAAAGTCTCTATCAGGTACTTTATCTACTA
TAAATCATATATTGGACGGTGAAAAGGATCTGAGGCCGTTTATGTATACG
GTGTTTTtgtatctatatattaatacgcttaatcGTGTGTGTTTAcgacg
ttttgtaaaaagttttcaaaaatctaacaaagctctacaaagcctcctct
tcatggcgttgaaccatcatctttttgcaccctaaccagatttcctacca
ctagactaactttgagacccaaAGATACTtttttctattcaccaagtttg
gagcttgatgggttaaaatcaaccttcttcccaatttctttttgccattt
tgaagaattcttattcagatgctctttaaaactttctgtttacaaaagtg
gctccctatcactttcaaaacttttcaaagtctttcaaagtcaccctcga
atgtccaaccacgatggctaagaagatctaaaatatacttttgctaagcc
atttatttaattgtggttaaaaattgcaatgcaatgttatcttttttctc
ctttatttcctaaaatcaaaatcaaatcatcaatcGGCGGCTATCTTTCT
TCCGTTAGAATGTTTTACATGTGTAGTGATtcactggattgggacacgca
gcgtgcgacgctgcgcatacggctaatatttttttttaaatctagttGTT
TGTGCAAGGTGTTGTTTGGCGATGTTGTTAGTTAATTTTGTGTTGCATCT
TCAAAAATATCGTGAtttttttGGTGGGGTCATCAAAATCAGTAAAAGAG
CTCTTCAATCTGAGCAAGAAATGTACTACGACAACTTTCCAACTTTTTAT
TAATCTAAATTGCGGATGTTTTTGTCGCAAAAAATGAATGTAAATTTAGA
ATTTCCtaatattctttaaaaatttatgCCAAATTGATAAGACATTTTTT
ACCTCAAACACGTCAataactttgttgtttttgtaagaTCATCAGCAATT
GGATTTAAATTATAACATTTATTCTGATTTTATTTAGATTGTTCCAGAAT
GCTAATTACAACAAAGAAAAACGAAGCATGGAAGACAAGGAGGTAACTTA
CTTAAGGATAACCTAGCTAAGCGATGACCAAATGGACAAGATTTCCGAGC
CTCAATCCATGGGGATCTCGGTTCGAATTTGAATTCGGTTCGAGCGGCTC
TAATCTCCGCTCCTTTAAATGAACTGTTCAAGTTCTTAGATAACCAGGCC
GACTGGCGGCGGATCCATAGAGAACTACTAGTATTGAAACACTGTCCAAA
ACTCCTAAAACTCCAATAGTCAAGTCTGTCGATATATTTATCAATCAAac
atatgttttttatttgtactaaaggttttatttttacataagtttttcag
tttCATATTAgaaacatatttcatatcaggacagtgtatGTCTATTggta
tattgtgctgatataaacaaataatctttttcttttcctctttctgatca
atcttgctctACGTCTGTGTCACAATCCAacatgaaaaagcttgtaaaaa
ttaaaaattgatgagtaagcaaacgacatcacccttatttaaaagcaaaa
cctttaCAAGTACTAATAAACATTTCTAAATGAAACTTATCGTAAAGTGG
GTACACCATACTATACTACTCATCAGTAAAAATGATTAGTTTTATGATTG
ATAATTCCTGATTACTCCGaaatatttttcaggaaaagaaaattaattgt
GAGAAAGGTAACTGCGTTGAATTGGAAGCTACcatgaaatggaaaaatta
cTCAACAGATGTCCAAATTAAATCGATCAAGAAAGCGAAATCAAAGAATT
GGTCCAAAagagtaaaataattttttctaatttcactACTGTATATTagt
agcccgggggggggggggagtcaggcaaattgaccgacgtgtatgtgcgg
cggttaagggtatgcttttcaaaatatcagaaatgcactgtaagggtgga
tttttgataaatgcactgtatgggtggaaatttcagcgaatcgaggaaaa
attgcaaaaaaaatgcactgtaagggtgcgattctgaaagtaactttttt
caccgcacataccgtcagttggtaaacccactgccccctgGATTAGGAGC
CATTAATGTTATAACGTTCATACTCATAGGCAGTTTTCAGAAAACTTTAG
ATGGAAACTTATGAATGTAATAATGAGTGGCATTGAATTCTGATACGAAC
AAAGACAAAATATAAAAGACTAGCGGTCTCAGACGTCGTCACAGACAACT
TTTCTCATCTGAAATGTGCATAATAAGTAGTGAAGAAAGGCGGTTATAGA
AGACAAATATGAAAGATTGGTAATAGATCGGGGAATTCccttaaaacttt
aaaaccgcaagtgattattaagtgctttgaagtacgctttgaaagtagag
ttttaacactgAGTCTTAAGATGTGTTAAAATTAGACTTAAAACTTGGGG
cattaggatctcaggatctaaaagctcaaaaatgttccaataaggctgag
aatacaGCCtagaagccacttaacccctcccaaatcgaaaaatccaatta
AATAAAgaggaagtactgaaactgcaattctcgcccgatctttaaattct
ggaaaacgttaaaatacccagtTAAAATTGCCAGTCTATTTCGAGGCCGG
TTATAGAACTATAAAAGATTGGTAATCGATCTAGAGCTCTATGAGTAAAA
TAATGATAATCTTCCATTATTTTATTACTAGCTTTCAATCAACGTTGGAG
AAAATGAGAAGGGTAACGTTGTAGCATTCGACAACATTGTAGTGACCGAA
GGAGATTGCGTTGATGCGTGAACAGGATGATAAAGCGG Coding sequence (CDS) from alignment at sc0000108_pilon:641215..645152+ >MSTRG.13549.1.p1 ID=MSTRG.13549.1.p1|Name=MSTRG.13549.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2805bp|location=Sequence derived from alignment at sc0000108_pilon:641215..645152+ (Clytia hemisphaerica_ch_hm2_pilon)
tgcaGGGAACCAAGATTTTGCAAATCAATTGACAAGTCTGATGATGTTTG
CTCCATCAGAGATGTTAAGTCGGTAGTTGGAGCCCTCTGTCCATTCAAAT
GCGGCACCTGCCCTGAAGATGTTGAAAATTACGTTGAAACGTCCGGTACA
CATGCACGACTGAACTTGATCGTaaaagaagatgaagaaaaagaagagaa
agaagacgaagaggaagaagaggaagaTGATAATTTCTGTgttcactttt
attacaaagtaGAAAAGGCACAGAAAGTCTCTATCAGATTGTTCCAGAAT
GCTAATTACAACAAAGAAAAACGAAGCATGGAAGACAAGGAGgaaaagaa
aattaattgtGAGAAAGGTAACTGCGTTGAATTGGAAGCTACcatgaaat
ggaaaaattacTCAACAGATGTCCAAATTAAATCGATCAAGAAAGCGAAA
TCAAAGAATTGGTCCAAAagaCTTTCAATCAACGTTGGAGAAAATGAGAA
GGGTAACGTTGTAGCATTCGACAACATTGTAGTGACCGAAGGAGATTGCG
TTGATGCGTGAtgcaGGGAACCAAGATTTTGCAAATCAATTGACAAGTCT
GATGATGTTTGCTCCATCAGAGATGTTAAGTCGGTAGTTGGAGCCCTCTG
TCCATTCAAATGCGGCACCTGCCCTGAAGATGTTGAAAATTACGTTGAAA
CGTCCGGTACACATGCACGACTGAACTTGATCGTaaaagaagatgaagaa
aaagaagagaaagaagacgaagaggaagaagaggaagaTGATAATTTCTG
TgttcacttttattacaaagtaGAAAAGGCACAGAAAGTCTCTATCAGAT
TGTTCCAGAATGCTAATTACAACAAAGAAAAACGAAGCATGGAAGACAAG
GAGgaaaagaaaattaattgtGAGAAAGGTAACTGCGTTGAATTGGAAGC
TACcatgaaatggaaaaattacTCAACAGATGTCCAAATTAAATCGATCA
AGAAAGCGAAATCAAAGAATTGGTCCAAAagaCTTTCAATCAACGTTGGA
GAAAATGAGAAGGGTAACGTTGTAGCATTCGACAACATTGTAGTGACCGA
AGGAGATTGCGTTGATGCGTGAtgcaGGGAACCAAGATTTTGCAAATCAA
TTGACAAGTCTGATGATGTTTGCTCCATCAGAGATGTTAAGTCGGTAGTT
GGAGCCCTCTGTCCATTCAAATGCGGCACCTGCCCTGAAGATGTTGAAAA
TTACGTTGAAACGTCCGGTACACATGCACGACTGAACTTGATCGTaaaag
aagatgaagaaaaagaagagaaagaagacgaagaggaagaagaggaagaT
GATAATTTCTGTgttcacttttattacaaagtaGAAAAGGCACAGAAAGT
CTCTATCAGATTGTTCCAGAATGCTAATTACAACAAAGAAAAACGAAGCA
TGGAAGACAAGGAGgaaaagaaaattaattgtGAGAAAGGTAACTGCGTT
GAATTGGAAGCTACcatgaaatggaaaaattacTCAACAGATGTCCAAAT
TAAATCGATCAAGAAAGCGAAATCAAAGAATTGGTCCAAAagaCTTTCAA
TCAACGTTGGAGAAAATGAGAAGGGTAACGTTGTAGCATTCGACAACATT
GTAGTGACCGAAGGAGATTGCGTTGATGCGTGAtgcaGGGAACCAAGATT
TTGCAAATCAATTGACAAGTCTGATGATGTTTGCTCCATCAGAGATGTTA
AGTCGGTAGTTGGAGCCCTCTGTCCATTCAAATGCGGCACCTGCCCTGAA
GATGTTGAAAATTACGTTGAAACGTCCGGTACACATGCACGACTGAACTT
GATCGTaaaagaagatgaagaaaaagaagagaaagaagacgaagaggaag
aagaggaagaTGATAATTTCTGTgttcacttttattacaaagtaGAAAAG
GCACAGAAAGTCTCTATCAGATTGTTCCAGAATGCTAATTACAACAAAGA
AAAACGAAGCATGGAAGACAAGGAGgaaaagaaaattaattgtGAGAAAG
GTAACTGCGTTGAATTGGAAGCTACcatgaaatggaaaaattacTCAACA
GATGTCCAAATTAAATCGATCAAGAAAGCGAAATCAAAGAATTGGTCCAA
AagaCTTTCAATCAACGTTGGAGAAAATGAGAAGGGTAACGTTGTAGCAT
TCGACAACATTGTAGTGACCGAAGGAGATTGCGTTGATGCGTGAtgcaGG
GAACCAAGATTTTGCAAATCAATTGACAAGTCTGATGATGTTTGCTCCAT
CAGAGATGTTAAGTCGGTAGTTGGAGCCCTCTGTCCATTCAAATGCGGCA
CCTGCCCTGAAGATGTTGAAAATTACGTTGAAACGTCCGGTACACATGCA
CGACTGAACTTGATCGTaaaagaagatgaagaaaaagaagagaaagaaga
cgaagaggaagaagaggaagaTGATAATTTCTGTgttcacttttattaca
aagtaGAAAAGGCACAGAAAGTCTCTATCAGATTGTTCCAGAATGCTAAT
TACAACAAAGAAAAACGAAGCATGGAAGACAAGGAGgaaaagaaaattaa
ttgtGAGAAAGGTAACTGCGTTGAATTGGAAGCTACcatgaaatggaaaa
attacTCAACAGATGTCCAAATTAAATCGATCAAGAAAGCGAAATCAAAG
AATTGGTCCAAAagaCTTTCAATCAACGTTGGAGAAAATGAGAAGGGTAA
CGTTGTAGCATTCGACAACATTGTAGTGACCGAAGGAGATTGCGTTGATG
CGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000108_pilon | genome | sc0000108_pilon:641215..645152 + |
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