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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:635143..640539+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13548.2.p2 ID=MSTRG.13548.2.p2|Name=MSTRG.13548.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5397bp|location=Sequence derived from alignment at sc0000108_pilon:635143..640539+ (Clytia hemisphaerica_ch_hm2_pilon)
TAGaagattttgaagaattttgggAGTTGAATTGTATTCATATTCAAGAT
GTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGACACATC
CTCGGAAATTAGGTGAGTTCTGAAAGGATAGGGCTATCTAACGTTAATTA
TGAGCCAACAGATCGGCAAAGACTGCACGCaacccctctgatatgttttg
atatagggcaGCTTTGTATCATGTATAAAATTCTCGTCTGAGAGTGACCT
CCGTCTttctgtttttgagttttagaaaattgattGGCTTGATttagtaa
gttttatatgagagatctttaaattttgttaaagtttaattggaaatttg
aaatggCTGGAGAttaatacaatcattggatttctgaagctttttaaaaa
gaaaactaaaacaGGTTACACAGAAACTCTCGAacaggaattttatacac
gattcGCATCccctttttcaaaattatttctgaTGGGGATGCACGCAGCC
TACCATCGACCTTCCACCAACTcagaaaaatcaagccacctcCATATCAA
CTGCAATTTGTTCGTACCGTTTTTCTTTCAGATAATTTGGTTGAAAAGTT
GGAACAAGATCTAATGGATCTGGAaaaactttccaataaaatggatgcca
aaaaaattaacaagagaGAAGGTAAGTTCctcaaaatgttcattttttat
tataaaaataccGGGATTTGAACCACAGATTTATAAATCCGAAAGGGCCA
AATGTTGTGCTTTGGCTTAAAGATGTGGCGTTTCTCGGTGGAAAATCCCA
CCGAGGTTCCGTGTCATTATAAAAGAATTTCAACGCtttaaccaatcaga
agcttcggtggattttcgaaaacaatagcttAAACAAAAGCTTAAAGCCA
CGACATCTTGCCTTAGCAAGAAGAagcttcgggctttacagaaatttgCG
CCCTCTCTGTTACTAATTCTAGTAAGCTTCTGTTAGAAATAATGAgatca
tcttgacttacgcatattaAGAATACACCATTGTCTCAGTAACCCCGTCA
AAGTCTTAGAATCCACTGGGCTTGTAAGTCTGTCTCGAAAGTAGTAGAAG
CTTCAGTTTTTGTGCATTTTCTAAGCACACTTTCATACTCTTTTTgaaag
ttatacaccgttggaaatatatttccatggagaataatctaaaggataga
agatttttgaaaaattgaaaagtgaagaagaagaattaagatgaaaaaaa
tgaagatataTTCTGctgttttaaaaatcatgacatcaggctatttaaaa
aatttgagctttgctgatttaaaatcttttcagatttttcgtatcttttt
tggataaaaagttacagcgCTCACTCAACTTTCTAACATAGCATAAATGG
GTACtgagaaaatgctcaaaaactgaagtgtgcacatacttttgagacaa
actttagttttttcttgCATTCAAAAGCAGTGTGGTAGTTAATAGCCCCT
AGGAGTATCAGCTCGTtaacaactttctttttatgACGCAATCACTAGAA
ACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTACACAGGCTCC
TGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAG
CTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACTACA
GAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAC
TACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAGCTCCTG
AAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAACAACACAGGCT
CCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTGAAACTACACA
GGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGCAACTA
CACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacacaagttcctgaa
acaacacaggctcctggaacaacacaggctcctggaacaacacaGGCTTC
TGAAACCACACAGGCTCCTGAAACTACACAGGCTCCTGAAACTACACAGA
CTCCTGAAACAACACAAGCTCCTGAAACAACACAGGCTCCTGAAACAACA
CAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAA
ACCTGAAGAAGTTCTACGTAAGTtcatgtaaaatacaaaaactaAATAAG
TTGTGTGCTGTTCTTAGAGAAAGTCTAGCTCTAGTATTATAATGAATTTT
CAATTGTCCTTATATCATATGTAACGGGCAAGTCGTTAGGTAAAAATTCC
AAAGTTTATTCTTCTAAACGAACTCGTCAGTCATTCCATAAACTTGATGC
GTTTCAAGCGAACcgtggtgcagtggtagagcatccagctatggttccca
aggttgtgggttcaacccgcAGCCtagtcataccaaagattctcaaaata
gtagcctctctgcttgatggtcAGCAATTAAGAGGagggtcaagggtaag
tggagacaagggtaagtggagaaatccagggagaaagagtggcgccctct
cctACCTTCTTGTAAATACTTAGTTATCGAAAGAGCAGCCTTCAGTGTAA
TATTTGAAGACTCAAGAGATTTAATTACTTATGAAAATTGTTGCactgaa
atcctgaaaataatTTATGGACAGGCCTATTGACGTTTTTTCCTTGCTAT
ATAATTGTACAGTGATTAAAGGCccgtctccacttgcgcgcactGCGATC
GCTCttcttcgagcaaagcttcgacgctattggtcaaaagaaaaatgaag
caattccattggtgtgatatgacgtaacgatcgcgcgcttgaaaaaaaag
tttaaatacatttatgacgtaatcttttctccaagcaaaaatgattgaag
ccaaagttgcgattgcagcgcgcgcaagtggagaccgaccttaAGGTCAT
AATATAAAACTCTTGCTGAGCTAAAAGGTTGTAAAGAACACGGTATTCAG
TAATTATTTCTCTTTctttatataaatttttatttcaaacaatatttcga
cctccTTATTATTGGAGTTCTTAATCAGGTTTACTTTACAGATTTACATT
TAGACCCCCACTAAggaggtcgaaatattgtttaaaataaaaatttatgt
GAAGAATGATCATTTGAACGTGCATAAATGATTCAAAAACATTCTCATCT
AAAGTATGTCAATTCAAGAATttacttctttctttttcaggaaAAGGTTT
TAGTGATATGGATAATATCCGGGGTAAGTAGTACCAGACAAGTGTTGCAA
GATTCTTTCATAATGTAGAAAGGATAGGGGCACAacatttgtgtaggaga
gcagatttttattacactgtaattatctattcataatgtaacaagataat
tacagtgtcatataAATCTGCTcttctacacaaattttgcgctcCTATCC
TATCTAATCTACTGAGGTTCTTTGATCTTTACTCTTGACTACCCAGCTGG
CAgacaacgttcatataacgttagttgAACGCTCAAACAAcgttgtgcca
gctgggtaagctATGTTCACCACTAACAATGTTTGatcgaaagttttttg
aaacGCGGCACCCTTATGGTAGCAATGTAGGTCAAtttatgtttcaaaaa
taattcttcgttcaaaaattttgctgcCGTGGGCCAGTGATGTGCTAagt
attcttgaaaaaatatttacatttctGACATTTTGATGATGCCACTGGCC
GAAAAACCGtcaaaagtgagcaaaaaatcaTGGGCACACTTAACAAAGAT
TGGCAAtccaaaaaatcttattttaagccaaaattacacccccttcttat
ATACCCACTGGGACccattcccactggaaaaatcggccaaaatatcgtcc
ccggtggaaaattatactgcAATTTTTGTCcgcactgaaaataatcaaat
gaacCAGTCCTCACTACAAactattttgttatttttcccatcccaactga
attttccgacttaataacaaaataattgaaatttccagccataaaaaata
tggcaATGTCAATCACCATCAAGTTTCAGCCCATgattttttatccccat
tggctaaaacaatcctaccgggtctgcgGGAAGGGGGTGTCAAATTTTGC
AAACTCACTCCTTAAAAGTTGTTTCAATTCATATTCTGAATGCTATTTCA
CTTTCACAGAAAGtctagattttattttttagtcaCTTACATTGGGAATT
TAGgcagaaaattttctttcagtcTTTTCATTAATCTCGTCCATTCAGAA
CATGGTCACACGACAAAAGGGATATACAGGGAAAGttcgagttcgaacat
gattctgagtagaaggttgttgcgtgtgttctCGATACGATCTGGACACC
CTGTATCAGTATTTTGAAAACGTGAGAAATCTATTTTAATCCCCCTGCCC
TCCCCCTGGTACCACCTTAATTGAATAACCGAATTCAGAAATTTTTacgt
tttgttttatttcagcAACAACAAGAATGAGAAGATTTACATTGAAAGGT
TACTATACTCTACTAACCCTATCTTGCTCGGGCCTAGGGATGTTTTTTCA
CTCCCCTGGGCTAGATCGGGTTAAAATCTAAGAAAATCTAATAACAAGTA
TGCTTTGAATGTACTTTTGAAATTTACAATAATTCAATTTGATTAAATTA
GCTGGAATGGGATTCACATCAAACAAGGGAGTGTATCGAACGGCACACGT
TGTtcataaaaatattcataatttttaaaggCTTTGGATGTCCTTAATTC
CATCAGTATGCGAGTATTGTTTTGTCTATTTTcccaagaaatcgggtgtt
ttagagtctgcaaagccttgacTTGTATTTATAAGATTTTGACCATCgca
gccttatgttcttatatagtttgttcttatgataAACGTGCAAagaatcg
aataagagagcgtcaacattaaaataaaatcaaaaaataaagccTGGGTG
TGCAATTAAGTGGGCCTGGTAGTAAATGTAAATTTGCTTTTGCTTAGGTG
CCcaattttagttgtttttgcaAAGGTAACAAAAGAATGAAAGTAATCTG
TTAGTCGTgtttgttttcttaatcatatttttcattccaagtagtttttt
cgttatttggaatttttgcataattttttcaaaatggcgacctcatcaaa
tgctcctagtctacttcactggacttcGTTATCgaaaatcatcagaaagt
tcATTCAGAAGTACACTTTAGTGTAGTAAAATACAACGATacaatatatg
ttttttttaaggaaactgtgttgatgaaagaagaaaatgtcgCAAGG Coding sequence (CDS) from alignment at sc0000108_pilon:635143..640539+ >MSTRG.13548.2.p2 ID=MSTRG.13548.2.p2|Name=MSTRG.13548.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5964bp|location=Sequence derived from alignment at sc0000108_pilon:635143..640539+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGACACA
TCCTCGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAAGATCTAATGG
ATCTGGAaaaactttccaataaaatggatgccaaaaaaattaacaagaga
GAAGAAACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTACACA
GGCTCCTGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTA
CACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAA
ACTACAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGGCTCC
TGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAG
CTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAACAACA
CAGGCTCCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTGAAAC
TACACAGGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTG
CAACTACACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacacaaGCT
CCTGAAACTACACAGGCTCCTGAAACTACACAGACTCCTGAAACAACACA
AGCTCCTGAAACAACACAGGCTCCTGAAACAACACAGGCTCCTGAAACTA
CACAAGCTCCTGAAACAACACAGGCTCCTGAAAAACCTGAAGAAGTTCTA
CgaaAAGGTTTTAGTGATATGGATAATATCCGGGcAACAACAAGAATGAG
AAGATTTACATTGAAAGgaaactgtgttgatgaaagaagaaaatgtcgCA
AGATGTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGACA
CATCCTCGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAAGATCTAAT
GGATCTGGAaaaactttccaataaaatggatgccaaaaaaattaacaaga
gaGAAGAAACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTACA
CAGGCTCCTGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAAC
TACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTG
AAACTACAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGGCT
CCTGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACA
AGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAACAA
CACAGGCTCCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTGAA
ACTACACAGGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCC
TGCAACTACACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacacaaG
CTCCTGAAACTACACAGGCTCCTGAAACTACACAGACTCCTGAAACAACA
CAAGCTCCTGAAACAACACAGGCTCCTGAAACAACACAGGCTCCTGAAAC
TACACAAGCTCCTGAAACAACACAGGCTCCTGAAAAACCTGAAGAAGTTC
TACgaaAAGGTTTTAGTGATATGGATAATATCCGGGcAACAACAAGAATG
AGAAGATTTACATTGAAAGgaaactgtgttgatgaaagaagaaaatgtcg
CAAGATGTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGA
CACATCCTCGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAAGATCTA
ATGGATCTGGAaaaactttccaataaaatggatgccaaaaaaattaacaa
gagaGAAGAAACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTA
CACAGGCTCCTGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAA
ACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCC
TGAAACTACAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGG
CTCCTGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACA
CAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAAC
AACACAGGCTCCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTG
AAACTACACAGGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCT
CCTGCAACTACACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacaca
aGCTCCTGAAACTACACAGGCTCCTGAAACTACACAGACTCCTGAAACAA
CACAAGCTCCTGAAACAACACAGGCTCCTGAAACAACACAGGCTCCTGAA
ACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAAACCTGAAGAAGT
TCTACgaaAAGGTTTTAGTGATATGGATAATATCCGGGcAACAACAAGAA
TGAGAAGATTTACATTGAAAGgaaactgtgttgatgaaagaagaaaatgt
cgCAAGATGTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTC
GACACATCCTCGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAAGATC
TAATGGATCTGGAaaaactttccaataaaatggatgccaaaaaaattaac
aagagaGAAGAAACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAAC
TACACAGGCTCCTGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTG
AAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCT
CCTGAAACTACAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACA
GGCTCCTGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTA
CACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAA
ACAACACAGGCTCCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCC
TGAAACTACACAGGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAG
CTCCTGCAACTACACAGGCCCCTGAAACTACACAGGCTTCTGAaacaaca
caaGCTCCTGAAACTACACAGGCTCCTGAAACTACACAGACTCCTGAAAC
AACACAAGCTCCTGAAACAACACAGGCTCCTGAAACAACACAGGCTCCTG
AAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAAACCTGAAGAA
GTTCTACgaaAAGGTTTTAGTGATATGGATAATATCCGGGcAACAACAAG
AATGAGAAGATTTACATTGAAAGgaaactgtgttgatgaaagaagaaaat
gtcgCAAGATGTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTT
TCGACACATCCTCGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAAGA
TCTAATGGATCTGGAaaaactttccaataaaatggatgccaaaaaaatta
acaagagaGAAGAAACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGA
ACTACACAGGCTCCTGCAACTACACAAGCTCCTGAAACTACAGAGGCTCC
TGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAG
CTCCTGAAACTACAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAACA
CAGGCTCCTGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAAC
TACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCCCCTG
AAACAACACAGGCTCCTGAAACTACACAGGCTCCTGCAACTACACAAGCC
CCTGAAACTACACAGGCCCCTGAAACAACACAGGCTCCTGAAACTACACA
AGCTCCTGCAACTACACAGGCCCCTGAAACTACACAGGCTTCTGAaacaa
cacaaGCTCCTGAAACTACACAGGCTCCTGAAACTACACAGACTCCTGAA
ACAACACAAGCTCCTGAAACAACACAGGCTCCTGAAACAACACAGGCTCC
TGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAAACCTGAAG
AAGTTCTACgaaAAGGTTTTAGTGATATGGATAATATCCGGGcAACAACA
AGAATGAGAAGATTTACATTGAAAGgaaactgtgttgatgaaagaagaaa
atgtcgCAAGATGTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCG
TTTCGACACATCCTCGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAA
GATCTAATGGATCTGGAaaaactttccaataaaatggatgccaaaaaaat
taacaagagaGAAGAAACTACGCAGGCTCCTGAAACAACACAGGCTCCTG
GAACTACACAGGCTCCTGCAACTACACAAGCTCCTGAAACTACAGAGGCT
CCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACA
AGCTCCTGAAACTACAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAA
CACAGGCTCCTGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAA
ACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCCCC
TGAAACAACACAGGCTCCTGAAACTACACAGGCTCCTGCAACTACACAAG
CCCCTGAAACTACACAGGCCCCTGAAACAACACAGGCTCCTGAAACTACA
CAAGCTCCTGCAACTACACAGGCCCCTGAAACTACACAGGCTTCTGAaac
aacacaaGCTCCTGAAACTACACAGGCTCCTGAAACTACACAGACTCCTG
AAACAACACAAGCTCCTGAAACAACACAGGCTCCTGAAACAACACAGGCT
CCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAAACCTGA
AGAAGTTCTACgaaAAGGTTTTAGTGATATGGATAATATCCGGGcAACAA
CAAGAATGAGAAGATTTACATTGAAAGgaaactgtgttgatgaaagaaga
aaatgtcgCAAGATGTCACCAAAATTGATGTATCTTCTCCTTTTGATGGT
CGTTTCGACACATCCTCGGAAATTAGATAATTTGGTTGAAAAGTTGGAAC
AAGATCTAATGGATCTGGAaaaactttccaataaaatggatgccaaaaaa
attaacaagagaGAAGAAACTACGCAGGCTCCTGAAACAACACAGGCTCC
TGGAACTACACAGGCTCCTGCAACTACACAAGCTCCTGAAACTACAGAGG
CTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACA
CAAGCTCCTGAAACTACAGAGGCTCCTGAAATTACACAAGCTCCTGAAAC
AACACAGGCTCCTGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTG
AAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCC
CCTGAAACAACACAGGCTCCTGAAACTACACAGGCTCCTGCAACTACACA
AGCCCCTGAAACTACACAGGCCCCTGAAACAACACAGGCTCCTGAAACTA
CACAAGCTCCTGCAACTACACAGGCCCCTGAAACTACACAGGCTTCTGAa
acaacacaaGCTCCTGAAACTACACAGGCTCCTGAAACTACACAGACTCC
TGAAACAACACAAGCTCCTGAAACAACACAGGCTCCTGAAACAACACAGG
CTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAAACCT
GAAGAAGTTCTACgaaAAGGTTTTAGTGATATGGATAATATCCGGGcAAC
AACAAGAATGAGAAGATTTACATTGAAAGgaaactgtgttgatgaaagaa
gaaaatgtcgCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108_pilon | genome | sc0000108_pilon:635143..640539 + |
|
