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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:635044..640539+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13548.1.p2 ID=MSTRG.13548.1.p2|Name=MSTRG.13548.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5496bp|location=Sequence derived from alignment at sc0000108_pilon:635044..640539+ (Clytia hemisphaerica_ch_hm2_pilon)
acgtcgaaaaaacgttgtgtgccagctgggatcgTCTAGTAAATAAACTA
GAGACTGATCatcttttaaatcttttctGCACATAATAATTTGATATTCT
AGaagattttgaagaattttgggAGTTGAATTGTATTCATATTCAAGATG
TCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGACACATCC
TCGGAAATTAGGTGAGTTCTGAAAGGATAGGGCTATCTAACGTTAATTAT
GAGCCAACAGATCGGCAAAGACTGCACGCaacccctctgatatgttttga
tatagggcaGCTTTGTATCATGTATAAAATTCTCGTCTGAGAGTGACCTC
CGTCTttctgtttttgagttttagaaaattgattGGCTTGATttagtaag
ttttatatgagagatctttaaattttgttaaagtttaattggaaatttga
aatggCTGGAGAttaatacaatcattggatttctgaagctttttaaaaag
aaaactaaaacaGGTTACACAGAAACTCTCGAacaggaattttatacacg
attcGCATCccctttttcaaaattatttctgaTGGGGATGCACGCAGCCT
ACCATCGACCTTCCACCAACTcagaaaaatcaagccacctcCATATCAAC
TGCAATTTGTTCGTACCGTTTTTCTTTCAGATAATTTGGTTGAAAAGTTG
GAACAAGATCTAATGGATCTGGAaaaactttccaataaaatggatgccaa
aaaaattaacaagagaGAAGGTAAGTTCctcaaaatgttcattttttatt
ataaaaataccGGGATTTGAACCACAGATTTATAAATCCGAAAGGGCCAA
ATGTTGTGCTTTGGCTTAAAGATGTGGCGTTTCTCGGTGGAAAATCCCAC
CGAGGTTCCGTGTCATTATAAAAGAATTTCAACGCtttaaccaatcagaa
gcttcggtggattttcgaaaacaatagcttAAACAAAAGCTTAAAGCCAC
GACATCTTGCCTTAGCAAGAAGAagcttcgggctttacagaaatttgCGC
CCTCTCTGTTACTAATTCTAGTAAGCTTCTGTTAGAAATAATGAgatcat
cttgacttacgcatattaAGAATACACCATTGTCTCAGTAACCCCGTCAA
AGTCTTAGAATCCACTGGGCTTGTAAGTCTGTCTCGAAAGTAGTAGAAGC
TTCAGTTTTTGTGCATTTTCTAAGCACACTTTCATACTCTTTTTgaaagt
tatacaccgttggaaatatatttccatggagaataatctaaaggatagaa
gatttttgaaaaattgaaaagtgaagaagaagaattaagatgaaaaaaat
gaagatataTTCTGctgttttaaaaatcatgacatcaggctatttaaaaa
atttgagctttgctgatttaaaatcttttcagatttttcgtatctttttt
ggataaaaagttacagcgCTCACTCAACTTTCTAACATAGCATAAATGGG
TACtgagaaaatgctcaaaaactgaagtgtgcacatacttttgagacaaa
ctttagttttttcttgCATTCAAAAGCAGTGTGGTAGTTAATAGCCCCTA
GGAGTATCAGCTCGTtaacaactttctttttatgACGCAATCACTAGAAA
CTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTACACAGGCTCCT
GCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAGC
TCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACTACAG
AGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACT
ACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAGCTCCTGA
AACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAACAACACAGGCTC
CTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTGAAACTACACAG
GCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGCAACTAC
ACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacacaagttcctgaaa
caacacaggctcctggaacaacacaggctcctggaacaacacaGGCTTCT
GAAACCACACAGGCTCCTGAAACTACACAGGCTCCTGAAACTACACAGAC
TCCTGAAACAACACAAGCTCCTGAAACAACACAGGCTCCTGAAACAACAC
AGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAAA
CCTGAAGAAGTTCTACGTAAGTtcatgtaaaatacaaaaactaAATAAGT
TGTGTGCTGTTCTTAGAGAAAGTCTAGCTCTAGTATTATAATGAATTTTC
AATTGTCCTTATATCATATGTAACGGGCAAGTCGTTAGGTAAAAATTCCA
AAGTTTATTCTTCTAAACGAACTCGTCAGTCATTCCATAAACTTGATGCG
TTTCAAGCGAACcgtggtgcagtggtagagcatccagctatggttcccaa
ggttgtgggttcaacccgcAGCCtagtcataccaaagattctcaaaatag
tagcctctctgcttgatggtcAGCAATTAAGAGGagggtcaagggtaagt
ggagacaagggtaagtggagaaatccagggagaaagagtggcgccctctc
ctACCTTCTTGTAAATACTTAGTTATCGAAAGAGCAGCCTTCAGTGTAAT
ATTTGAAGACTCAAGAGATTTAATTACTTATGAAAATTGTTGCactgaaa
tcctgaaaataatTTATGGACAGGCCTATTGACGTTTTTTCCTTGCTATA
TAATTGTACAGTGATTAAAGGCccgtctccacttgcgcgcactGCGATCG
CTCttcttcgagcaaagcttcgacgctattggtcaaaagaaaaatgaagc
aattccattggtgtgatatgacgtaacgatcgcgcgcttgaaaaaaaagt
ttaaatacatttatgacgtaatcttttctccaagcaaaaatgattgaagc
caaagttgcgattgcagcgcgcgcaagtggagaccgaccttaAGGTCATA
ATATAAAACTCTTGCTGAGCTAAAAGGTTGTAAAGAACACGGTATTCAGT
AATTATTTCTCTTTctttatataaatttttatttcaaacaatatttcgac
ctccTTATTATTGGAGTTCTTAATCAGGTTTACTTTACAGATTTACATTT
AGACCCCCACTAAggaggtcgaaatattgtttaaaataaaaatttatgtG
AAGAATGATCATTTGAACGTGCATAAATGATTCAAAAACATTCTCATCTA
AAGTATGTCAATTCAAGAATttacttctttctttttcaggaaAAGGTTTT
AGTGATATGGATAATATCCGGGGTAAGTAGTACCAGACAAGTGTTGCAAG
ATTCTTTCATAATGTAGAAAGGATAGGGGCACAacatttgtgtaggagag
cagatttttattacactgtaattatctattcataatgtaacaagataatt
acagtgtcatataAATCTGCTcttctacacaaattttgcgctcCTATCCT
ATCTAATCTACTGAGGTTCTTTGATCTTTACTCTTGACTACCCAGCTGGC
AgacaacgttcatataacgttagttgAACGCTCAAACAAcgttgtgccag
ctgggtaagctATGTTCACCACTAACAATGTTTGatcgaaagttttttga
aacGCGGCACCCTTATGGTAGCAATGTAGGTCAAtttatgtttcaaaaat
aattcttcgttcaaaaattttgctgcCGTGGGCCAGTGATGTGCTAagta
ttcttgaaaaaatatttacatttctGACATTTTGATGATGCCACTGGCCG
AAAAACCGtcaaaagtgagcaaaaaatcaTGGGCACACTTAACAAAGATT
GGCAAtccaaaaaatcttattttaagccaaaattacacccccttcttatA
TACCCACTGGGACccattcccactggaaaaatcggccaaaatatcgtccc
cggtggaaaattatactgcAATTTTTGTCcgcactgaaaataatcaaatg
aacCAGTCCTCACTACAAactattttgttatttttcccatcccaactgaa
ttttccgacttaataacaaaataattgaaatttccagccataaaaaatat
ggcaATGTCAATCACCATCAAGTTTCAGCCCATgattttttatccccatt
ggctaaaacaatcctaccgggtctgcgGGAAGGGGGTGTCAAATTTTGCA
AACTCACTCCTTAAAAGTTGTTTCAATTCATATTCTGAATGCTATTTCAC
TTTCACAGAAAGtctagattttattttttagtcaCTTACATTGGGAATTT
AGgcagaaaattttctttcagtcTTTTCATTAATCTCGTCCATTCAGAAC
ATGGTCACACGACAAAAGGGATATACAGGGAAAGttcgagttcgaacatg
attctgagtagaaggttgttgcgtgtgttctCGATACGATCTGGACACCC
TGTATCAGTATTTTGAAAACGTGAGAAATCTATTTTAATCCCCCTGCCCT
CCCCCTGGTACCACCTTAATTGAATAACCGAATTCAGAAATTTTTacgtt
ttgttttatttcagcAACAACAAGAATGAGAAGATTTACATTGAAAGGTT
ACTATACTCTACTAACCCTATCTTGCTCGGGCCTAGGGATGTTTTTTCAC
TCCCCTGGGCTAGATCGGGTTAAAATCTAAGAAAATCTAATAACAAGTAT
GCTTTGAATGTACTTTTGAAATTTACAATAATTCAATTTGATTAAATTAG
CTGGAATGGGATTCACATCAAACAAGGGAGTGTATCGAACGGCACACGTT
GTtcataaaaatattcataatttttaaaggCTTTGGATGTCCTTAATTCC
ATCAGTATGCGAGTATTGTTTTGTCTATTTTcccaagaaatcgggtgttt
tagagtctgcaaagccttgacTTGTATTTATAAGATTTTGACCATCgcag
ccttatgttcttatatagtttgttcttatgataAACGTGCAAagaatcga
ataagagagcgtcaacattaaaataaaatcaaaaaataaagccTGGGTGT
GCAATTAAGTGGGCCTGGTAGTAAATGTAAATTTGCTTTTGCTTAGGTGC
CcaattttagttgtttttgcaAAGGTAACAAAAGAATGAAAGTAATCTGT
TAGTCGTgtttgttttcttaatcatatttttcattccaagtagttttttc
gttatttggaatttttgcataattttttcaaaatggcgacctcatcaaat
gctcctagtctacttcactggacttcGTTATCgaaaatcatcagaaagtt
cATTCAGAAGTACACTTTAGTGTAGTAAAATACAACGATacaatatatgt
tttttttaaggaaactgtgttgatgaaagaagaaaatgtcgCAAGG Coding sequence (CDS) from alignment at sc0000108_pilon:635044..640539+ >MSTRG.13548.1.p2 ID=MSTRG.13548.1.p2|Name=MSTRG.13548.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5544bp|location=Sequence derived from alignment at sc0000108_pilon:635044..640539+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGACACA
TCCTCGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAAGATCTAATGG
ATCTGGAaaaactttccaataaaatggatgccaaaaaaattaacaagaga
GAAGAAACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTACACA
GGCTCCTGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTA
CACAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAA
ACTACAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGGCTCC
TGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAG
CTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAACAACA
CAGGCTCCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTGAAAC
TACACAGGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTG
CAACTACACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacacaagtt
cctgaaacaacacaggctcctggaacaacacaggctcctggaacaacaca
GGCTTCTGAAACCACACAGGCTCCTGAAACTACACAGGCTCCTGAAACTA
CACAGACTCCTGAAACAACACAAGCTCCTGAAACAACACAGGCTCCTGAA
ACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCC
TGAAAAACCTGAAGAAGTTCTACgaaAAGGTTTTAGTGATATGGATAATA
TCCGGGcAACAACAAGAATGAGAAGATTTACATTGAAAGgaaactgtgtt
gatgaaagaagaaaatgtcgCAAGATGTCACCAAAATTGATGTATCTTCT
CCTTTTGATGGTCGTTTCGACACATCCTCGGAAATTAGATAATTTGGTTG
AAAAGTTGGAACAAGATCTAATGGATCTGGAaaaactttccaataaaatg
gatgccaaaaaaattaacaagagaGAAGAAACTACGCAGGCTCCTGAAAC
AACACAGGCTCCTGGAACTACACAGGCTCCTGCAACTACACAAGCTCCTG
AAACTACAGAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCT
CCTGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAATTACACA
AGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACTA
CAGAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAA
ACTACACAAGCCCCTGAAACAACACAGGCTCCTGAAACTACACAGGCTCC
TGCAACTACACAAGCCCCTGAAACTACACAGGCCCCTGAAACAACACAGG
CTCCTGAAACTACACAAGCTCCTGCAACTACACAGGCCCCTGAAACTACA
CAGGCTTCTGAaacaacacaagttcctgaaacaacacaggctcctggaac
aacacaggctcctggaacaacacaGGCTTCTGAAACCACACAGGCTCCTG
AAACTACACAGGCTCCTGAAACTACACAGACTCCTGAAACAACACAAGCT
CCTGAAACAACACAGGCTCCTGAAACAACACAGGCTCCTGAAACTACACA
AGCTCCTGAAACAACACAGGCTCCTGAAAAACCTGAAGAAGTTCTACgaa
AAGGTTTTAGTGATATGGATAATATCCGGGcAACAACAAGAATGAGAAGA
TTTACATTGAAAGgaaactgtgttgatgaaagaagaaaatgtcgCAAGAT
GTCACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGACACATC
CTCGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAAGATCTAATGGAT
CTGGAaaaactttccaataaaatggatgccaaaaaaattaacaagagaGA
AGAAACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTACACAGG
CTCCTGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACA
CAAGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAAC
TACAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGGCTCCTG
AAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAGCT
CCTGAAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAACAACACA
GGCTCCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTGAAACTA
CACAGGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGCA
ACTACACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacacaagttcc
tgaaacaacacaggctcctggaacaacacaggctcctggaacaacacaGG
CTTCTGAAACCACACAGGCTCCTGAAACTACACAGGCTCCTGAAACTACA
CAGACTCCTGAAACAACACAAGCTCCTGAAACAACACAGGCTCCTGAAAC
AACACAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTG
AAAAACCTGAAGAAGTTCTACgaaAAGGTTTTAGTGATATGGATAATATC
CGGGcAACAACAAGAATGAGAAGATTTACATTGAAAGgaaactgtgttga
tgaaagaagaaaatgtcgCAAGATGTCACCAAAATTGATGTATCTTCTCC
TTTTGATGGTCGTTTCGACACATCCTCGGAAATTAGATAATTTGGTTGAA
AAGTTGGAACAAGATCTAATGGATCTGGAaaaactttccaataaaatgga
tgccaaaaaaattaacaagagaGAAGAAACTACGCAGGCTCCTGAAACAA
CACAGGCTCCTGGAACTACACAGGCTCCTGCAACTACACAAGCTCCTGAA
ACTACAGAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCC
TGAAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAATTACACAAG
CTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACTACA
GAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAAC
TACACAAGCCCCTGAAACAACACAGGCTCCTGAAACTACACAGGCTCCTG
CAACTACACAAGCCCCTGAAACTACACAGGCCCCTGAAACAACACAGGCT
CCTGAAACTACACAAGCTCCTGCAACTACACAGGCCCCTGAAACTACACA
GGCTTCTGAaacaacacaagttcctgaaacaacacaggctcctggaacaa
cacaggctcctggaacaacacaGGCTTCTGAAACCACACAGGCTCCTGAA
ACTACACAGGCTCCTGAAACTACACAGACTCCTGAAACAACACAAGCTCC
TGAAACAACACAGGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAG
CTCCTGAAACAACACAGGCTCCTGAAAAACCTGAAGAAGTTCTACgaaAA
GGTTTTAGTGATATGGATAATATCCGGGcAACAACAAGAATGAGAAGATT
TACATTGAAAGgaaactgtgttgatgaaagaagaaaatgtcgCAAGATGT
CACCAAAATTGATGTATCTTCTCCTTTTGATGGTCGTTTCGACACATCCT
CGGAAATTAGATAATTTGGTTGAAAAGTTGGAACAAGATCTAATGGATCT
GGAaaaactttccaataaaatggatgccaaaaaaattaacaagagaGAAG
AAACTACGCAGGCTCCTGAAACAACACAGGCTCCTGGAACTACACAGGCT
CCTGCAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACA
AGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACTA
CAGAGGCTCCTGAAATTACACAAGCTCCTGAAACAACACAGGCTCCTGAA
ACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAACTACACAAGCTCC
TGAAACAACACAGGCTCCTGAAACTACACAAGCCCCTGAAACAACACAGG
CTCCTGAAACTACACAGGCTCCTGCAACTACACAAGCCCCTGAAACTACA
CAGGCCCCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGCAAC
TACACAGGCCCCTGAAACTACACAGGCTTCTGAaacaacacaagttcctg
aaacaacacaggctcctggaacaacacaggctcctggaacaacacaGGCT
TCTGAAACCACACAGGCTCCTGAAACTACACAGGCTCCTGAAACTACACA
GACTCCTGAAACAACACAAGCTCCTGAAACAACACAGGCTCCTGAAACAA
CACAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAA
AAACCTGAAGAAGTTCTACgaaAAGGTTTTAGTGATATGGATAATATCCG
GGcAACAACAAGAATGAGAAGATTTACATTGAAAGgaaactgtgttgatg
aaagaagaaaatgtcgCAAGATGTCACCAAAATTGATGTATCTTCTCCTT
TTGATGGTCGTTTCGACACATCCTCGGAAATTAGATAATTTGGTTGAAAA
GTTGGAACAAGATCTAATGGATCTGGAaaaactttccaataaaatggatg
ccaaaaaaattaacaagagaGAAGAAACTACGCAGGCTCCTGAAACAACA
CAGGCTCCTGGAACTACACAGGCTCCTGCAACTACACAAGCTCCTGAAAC
TACAGAGGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTG
AAACTACACAAGCTCCTGAAACTACAGAGGCTCCTGAAATTACACAAGCT
CCTGAAACAACACAGGCTCCTGAAACTACACAAGCTCCTGAAACTACAGA
GGCTCCTGAAACTACACAAGCTCCTGAAACAACACAGGCTCCTGAAACTA
CACAAGCCCCTGAAACAACACAGGCTCCTGAAACTACACAGGCTCCTGCA
ACTACACAAGCCCCTGAAACTACACAGGCCCCTGAAACAACACAGGCTCC
TGAAACTACACAAGCTCCTGCAACTACACAGGCCCCTGAAACTACACAGG
CTTCTGAaacaacacaagttcctgaaacaacacaggctcctggaacaaca
caggctcctggaacaacacaGGCTTCTGAAACCACACAGGCTCCTGAAAC
TACACAGGCTCCTGAAACTACACAGACTCCTGAAACAACACAAGCTCCTG
AAACAACACAGGCTCCTGAAACAACACAGGCTCCTGAAACTACACAAGCT
CCTGAAACAACACAGGCTCCTGAAAAACCTGAAGAAGTTCTACgaaAAGG
TTTTAGTGATATGGATAATATCCGGGcAACAACAAGAATGAGAAGATTTA
CATTGAAAGgaaactgtgttgatgaaagaagaaaatgtcgCAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108_pilon | genome | sc0000108_pilon:635044..640539 + |
|
