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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:271183..274076- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13533.1.p1 ID=MSTRG.13533.1.p1|Name=MSTRG.13533.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2894bp|location=Sequence derived from alignment at sc0000108_pilon:271183..274076- (Clytia hemisphaerica_ch_hm2_pilon)
GGGCGAATAGGAATAGTACAGAATAAAGAAGCAAAAGGGGAGAAAGAACA
GTGGCTGAAATTAAATATGTTATCAAAACAAAAAAGTTCTTGAGTAAAGA
GAAGAAGGACTACATTTTCAAAAAGTATATGAAAAACTTTGGAAAATATA
TAAGATAGGTGAAAAAAAAGATAGAGAAAAATATATGCCATTATAAAACT
TCTCTAATATAAGAAATTTGAAATAAATGACATTAGCTTGAATGTGATAA
TCTGCAGCGTTACGGGAGCGTTGCTTAGAAATTTTGGAAAAAACAACATA
AATTGCAAACACACGAATAAAATTTTATACCGATAGGACTAACTTTGTCA
ATATGGTAAGCTTTTTCTTTCTATTTCACATCTGTGAGGAGGGGTTTGTT
TAAAAATGGAAACAAAAGGGCAGCTGGATTTCAAAAAAAAATGTTAGTAC
CGCTGAATATTTTATCAGTACGCCGTTATTTGTCTGACTTGACTGGGTTT
TATGCCGGTATCCGGTATTTCAAGGAGAAATTACCTGTATATTCCGGTTA
TTCGTACTCTTGGAAAGGTCCCCGCATTTGAGGATGGTATAAGAATGCAA
GAATAGAGTCTAAAATACTCTCTTTGAGTGTCTGTTAGTTCAAAGAGTTT
ATAAACATATTTTGTAGTAAATCAATTTTTATTTACAATTTCTAGCCTCG
ACTTGGAAGACGTGAAAGTGAAGGTATTTATTCCTATCTTATTTTATTTT
TTACTTCTTACTTTTGCTGCCTTCTGCCTCCGTCAAATTGAAAAGTACAG
TTGATACGCTCTCTAATTCGATCTTCTAGAGACAAGAACTATTCTTCAAG
TTAAAGAAAGATTCGCATTTAGAAATTCTCATAAACGGCGTTCTTCTAAT
CGGCGACACGCTCCCCTATTCCATCAAAATCTGATTTCCCCCGAAAATCG
AAAATAAGAGAGGCGTCAATTTTATAAAGAGCACTAAAGGAAAGGTAAAG
GCAAAATTGTTCGAAATATCTGTAGATACCGGGTCTGTTCAAAAACCATA
CAAAAACTTTGTTGAAAATATGGCATCTAAAATTTAATTCTTCTTTCTTA
GATATGCAGAGACTGTTTGATACATTCGATTGTGATATGAATGGAAGGAT
TTCAAGAAGAGAATTGAAAGCTGTCTTCAAAGCTTTGAATGTTACCATCA
ATGATGAAAATTTGAGGTCTATGTTTCACTCCGCTGATAAAGACAGTAAG
TACCCGCCGTACCCGTTGCGTTGTGCCTGTAATTTTATATACGGAAGTAC
CAAAAAAGACCGGGTGTTTGACATTATAGTACATACCTAATAAAACAATA
GACGATATCGGCTTAACGAAATTCTCCCCGAATGATTACCCATGATGCAT
TGCGCGAAAAAAATCAGTAAGTCAATATTGTCCGTGAATTTTTTTGCGCA
ATGCATCATGGGTAATCATTCGGGGAGAATTCGTTAAGCCGATATCGTCT
ATTCCAATAGCAATACGGTAAATTTGAATTCAAACAGTAAAGCTAGTGGC
AAACGCCCGGGCTACTTTTAGTGGCTCCGTACAAAACATTACGCCATGAA
AATCATGAACAACCTCTTGTGGAAAAAAGAGGGTTGTATTTTAGACGATG
CTATCGTCCGTTTAAAGTAAATGCGAGAAAGAGTTAGGGCGTCAGGGCGG
TTTACGGGAAAAAAGTGGCGGTAGAGTTTTGGAACACTGTAAACATCTCC
GCCACTGCTTAGTCCACCCGAATTTATCACGCCTCTCCTAAACTATTCCC
TTTTTTAGTTGTTTTGTGTAGACGATAGGATCGTCTAGTTGTATTTGTGA
AGTAAAGTCAGTCATTATTTTCTCAACTTTTTCTCTTAGAAAGTGGTTTT
ATTGAATTTGGTGAATTTGTAAGAGTATTTAGTCCACCGAGTCAAGATGA
GCTTTTAAATGCATTTAAACGATTCGATAAGAATGGGGATGGTTTTCTGA
CACCTGATGAGGTGAAAGAAGTATTGAGAGATGCTAATCAGCCGGCAACC
GATCGGAATGTAACAGAAATGATTGAATCTGTTGATTCGAATGGTGATGG
AAAGATTAACTATAAAGGTAGGTTCTTAAAATCTCTTTATTTTCTGTCCT
TATTGTAGAATGAAAACAAAAGCTCAAAAGAAATGGGTTCCATGATGAAG
GTATTCATATGAAGGGAATTGACCGAAACCTTTGATTTAGTTTAACCAAA
GATGGTCAATAGTATAGGTTACTGCGACAACCCAAGTAGATTTTAATATT
TTCATCTTTAAGGAAAAGTTCCCCTTTATATGATTGTATACCATAGAATA
TGATGGGAAGCAAAATCTTGTTCTCTGTCACCCGTTGTTCTGCTAAGCAG
GAATACTCTGTTCTGGTGTGAAAATGTAACCGACAATAAATAGAAAAGAA
ATTATGAAAAATGATAATATTGGACCCCTGATGTATAGAGCTCTTATCGC
ATAACTGAAAGCGTCGTCTTTAATATTTTACTTTTTCTTTTTTCTACAGA
ATTTCTCACGATGTTAAAATCTTAGTGTAGTGGCTACAACATTTGAAAGG
TTCAAAATATTATGATTAGAATTTTTGTAAATATTGTCAAAATGAAATAA
ATTATAGCAAATAAAAAGAACTTTTTAAATAGAATTTTAAAACTTATCCT
CGTTAAGAAGGAGTTCTAATCTAAGTTACGTGATATCTCCTTCCTTTAGA
GCAGCCATGTGATTGCTGTTAAATCTATCCATGTCGAAATGTCGACAAAA
ATAATAGAATAATTCGAATAATTATCGGGACAACTATCGCCGTTGCGACG
ATGAGTTTTTCGTAACAAAAAAATTGCTCAGACGAAGGCTTAGC Coding sequence (CDS) from alignment at sc0000108_pilon:271183..274076- >MSTRG.13533.1.p1 ID=MSTRG.13533.1.p1|Name=MSTRG.13533.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2145bp|location=Sequence derived from alignment at sc0000108_pilon:271183..274076- (Clytia hemisphaerica_ch_hm2_pilon)
AATTTCTCACGATGTTAAAATCTTAGAAAGTGGTTTTATTGAATTTGGTG
AATTTGTAAGAGTATTTAGTCCACCGAGTCAAGATGAGCTTTTAAATGCA
TTTAAACGATTCGATAAGAATGGGGATGGTTTTCTGACACCTGATGAGGT
GAAAGAAGTATTGAGAGATGCTAATCAGCCGGCAACCGATCGGAATGTAA
CAGAAATGATTGAATCTGTTGATTCGAATGGTGATGGAAAGATTAACTAT
AAAGATATGCAGAGACTGTTTGATACATTCGATTGTGATATGAATGGAAG
GATTTCAAGAAGAGAATTGAAAGCTGTCTTCAAAGCTTTGAATGTTACCA
TCAATGATGAAAATTTGAGGTCTATGTTTCACTCCGCTGATAAAGACACC
TCGACTTGGAAGACGTGAAAGTGAAGATGAATTTCTCACGATGTTAAAAT
CTTAGAAAGTGGTTTTATTGAATTTGGTGAATTTGTAAGAGTATTTAGTC
CACCGAGTCAAGATGAGCTTTTAAATGCATTTAAACGATTCGATAAGAAT
GGGGATGGTTTTCTGACACCTGATGAGGTGAAAGAAGTATTGAGAGATGC
TAATCAGCCGGCAACCGATCGGAATGTAACAGAAATGATTGAATCTGTTG
ATTCGAATGGTGATGGAAAGATTAACTATAAAGATATGCAGAGACTGTTT
GATACATTCGATTGTGATATGAATGGAAGGATTTCAAGAAGAGAATTGAA
AGCTGTCTTCAAAGCTTTGAATGTTACCATCAATGATGAAAATTTGAGGT
CTATGTTTCACTCCGCTGATAAAGACACCTCGACTTGGAAGACGTGAAAG
TGAAGATGAATTTCTCACGATGTTAAAATCTTAGAAAGTGGTTTTATTGA
ATTTGGTGAATTTGTAAGAGTATTTAGTCCACCGAGTCAAGATGAGCTTT
TAAATGCATTTAAACGATTCGATAAGAATGGGGATGGTTTTCTGACACCT
GATGAGGTGAAAGAAGTATTGAGAGATGCTAATCAGCCGGCAACCGATCG
GAATGTAACAGAAATGATTGAATCTGTTGATTCGAATGGTGATGGAAAGA
TTAACTATAAAGATATGCAGAGACTGTTTGATACATTCGATTGTGATATG
AATGGAAGGATTTCAAGAAGAGAATTGAAAGCTGTCTTCAAAGCTTTGAA
TGTTACCATCAATGATGAAAATTTGAGGTCTATGTTTCACTCCGCTGATA
AAGACACCTCGACTTGGAAGACGTGAAAGTGAAGATGAATTTCTCACGAT
GTTAAAATCTTAGAAAGTGGTTTTATTGAATTTGGTGAATTTGTAAGAGT
ATTTAGTCCACCGAGTCAAGATGAGCTTTTAAATGCATTTAAACGATTCG
ATAAGAATGGGGATGGTTTTCTGACACCTGATGAGGTGAAAGAAGTATTG
AGAGATGCTAATCAGCCGGCAACCGATCGGAATGTAACAGAAATGATTGA
ATCTGTTGATTCGAATGGTGATGGAAAGATTAACTATAAAGATATGCAGA
GACTGTTTGATACATTCGATTGTGATATGAATGGAAGGATTTCAAGAAGA
GAATTGAAAGCTGTCTTCAAAGCTTTGAATGTTACCATCAATGATGAAAA
TTTGAGGTCTATGTTTCACTCCGCTGATAAAGACACCTCGACTTGGAAGA
CGTGAAAGTGAAGATGAATTTCTCACGATGTTAAAATCTTAGAAAGTGGT
TTTATTGAATTTGGTGAATTTGTAAGAGTATTTAGTCCACCGAGTCAAGA
TGAGCTTTTAAATGCATTTAAACGATTCGATAAGAATGGGGATGGTTTTC
TGACACCTGATGAGGTGAAAGAAGTATTGAGAGATGCTAATCAGCCGGCA
ACCGATCGGAATGTAACAGAAATGATTGAATCTGTTGATTCGAATGGTGA
TGGAAAGATTAACTATAAAGATATGCAGAGACTGTTTGATACATTCGATT
GTGATATGAATGGAAGGATTTCAAGAAGAGAATTGAAAGCTGTCTTCAAA
GCTTTGAATGTTACCATCAATGATGAAAATTTGAGGTCTATGTTTCACTC
CGCTGATAAAGACACCTCGACTTGGAAGACGTGAAAGTGAAGATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108_pilon | genome | sc0000108_pilon:271183..274076 - |
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