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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:13750..16211- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13527.1.p1 ID=MSTRG.13527.1.p1|Name=MSTRG.13527.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2462bp|location=Sequence derived from alignment at sc0000108_pilon:13750..16211- (Clytia hemisphaerica_ch_hm2_pilon)
CCTGATTAGGAGACGGGTCTCCTAATCAGGAGGCGTCTCCTAATAAGGCG
ACTGTTCCTGACTGTTACTGTTGGCGACCAAACGTCTTTGAGCCCAGAAA
ATTCATACAATAATAAACCTCTGGAGAATTTCTTTTGCTAGATATCTGCC
TTGACCTATTTCCCATACTGTGTACAAGAAAAATTCTAGAAAAGAGAACA
AGTAGAATCCGAAAGATCCAAACCATAACTCTCCTGCATTGGATTGGGCG
GGAGACTCCCTCATACCAACGTTTTTTCTATAACTGCCATCTTTGATTGG
ATTTTTTTTAGAATTGGTACCGTCAACTGCTCTAACTTGGGACGATTGGT
CGTAACATGGGACTGGTTGATATCTGGTCTCTGTATTTTCACTTACTGTT
AAATCTTTTTGACAACAAATTTGTTTTGATAACTCCACCAAGTTTATCAA
TCATTTCTTCGTTCCTCTTAGTAGAGTGCACAGACATTGCAAAAGAGAAA
TTGTGTATTTTTTAATACGCCGTTCATTAACTCAAATCAAACTTTAATGA
CCAGACAAGTCTTTAATCTGAGGGCGATGCGTGTTAGCCTCCACTGATGC
AAGTTACCCTTTCTCACGGTATAAACGTCATTGGTCTCAACCACGGAGTG
CTGACTTTTAGTCTTAATAACTTGTTCTAATAAGTCGTTATTGTGAACTT
TGAACATGCTTTAAGTGGAGGTATTTCCACTAGCTGATATTTTTCAGGTG
AAAAAAGTTTTCTTTTGACCGAATGCAAATGGACAAAATGGTCCATCTGG
CAGGTGGCCAGGTGGCAAAATTTGGTGTTACTGTTTAGAATTAAGTTTTA
GACCCTCTGAGGATCATCTGTGCCGAATTTCATGCTTTAATCACCATCTG
AAGTATCTTTGTGCTAACAGACCTCGGTCGATTTGCGTAAAAGTGGACAT
GGGGGGGTCACTATACTAACTTTCTTTTTTGTCATTTTACTTTTAAAGTT
CATTATTTTTATAATTTACTTGGCCTAGAAAAGATAGTTCACTCAAACAT
GGCTGATGATAAAGGGGATAATCTGAAGCAAGAAAACAATGATTGTCCAC
CAAAAGAAGTTGTTGATGATGATGAATTGGATGCACTGCTAGATGATGCA
TTAAGTGATTTTGTTAAACCGCCACCAAAGCCTAAAAAGGTTGAGAAAAA
AACTGAACAGCATGATCAGGGCTCTGATCTTGGTAATTTTCTGGATGATG
ATGCTCTCCTAAAAATGTCAGAAGGTTGGAATGAAGTTTTACAGCAAATG
TCTAGTGAAGATCCAGGCTTGATGGAGGAATTTGATAGCTTCCAAAAGCA
ATTTCCGATGGGTGGTGCAATGGGTGGCTTTCCTGGTACAGCACCAGAAG
GTGCTAATTTTGACGAACATATGAAAAACGCATTGAAAGATTTAACCAAT
AATTTTAATGATCTGAACATGGAGGGCCAGGATTTTGGTGCAGACTTTGG
TGGTGATTTTAGTGAAATGATGAAAGAAATGCAAGCTAGTATGGAAACAC
AACAAGGTCAAGGTGGAGCTGAGGGTGATACTATCTTTCCTGAGGGTGAT
GCTTTTATGGGCATGATGCAAGGGATGATGGAAAATTTACTTACAAAAGA
TTTATTGTATCCTTCCCTGAGTGAAATCAAAGAAAGATATCCTTCATGGT
TGTCAGAAAATAAAGAAAAATTAACTCCTGAAGATTATTTGAAATATAAA
AGCCAGAATGACATTGTAGTACAGTTGTGTGATCTCTTTGAGCAAGAGGC
TGATACTGACACTGAACAAACTAAGAAAGAAAGAACTTCCAAAGTTGTGG
AGCTTATGCAGAAAATGCAGGTATTTGGTCAACCACCTGCTGATATGATG
GCTGGTATCTCAGATTCTAATCAAATTCCTCCGATGCCACAACAATGTTC
TGTTATGTGATGTTGTTAGATTTCAGGATTTCTATAAGCCATTATATTAT
TTTTTACCTTTTAAACCATGAATGACTTGTAGGATCAATTATAATCTTCC
TTTTTCTAAATACTTCAAATTCTTTGCATTATTTCTAAATTCATTTTTGG
CATTTTTTGTGATCGAAATGTGTTATGTTTTTGATAATAGTAAATTGAAA
TTGTAAATGTTACTGATAGTGATAGATCCTGAAAGGTTTGCTGATGTCAA
ATTAATTTTTGCAATTTGTGGTTTTTTGTTTTTGTTTAAAATTTTCTATT
ATTCTCTTTTTTCTAAAATTATTTTTATTTTTTCTAATTTGTTAAATCAG
ACGAAAGTTGATTGCATGATGAGAAAAGCATTTTTCAAAAAGTGATTACA
ACTTTATTCCTTCCATTAATGAAGGTTTCCTAAATTTATAAAACATTTAT
CATTGTAGCTACAGGAATTAATATAAAATTATCAAAATTGGAACAATTTA
AAAAAATGATTG Coding sequence (CDS) from alignment at sc0000108_pilon:13750..16211- >MSTRG.13527.1.p1 ID=MSTRG.13527.1.p1|Name=MSTRG.13527.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=912bp|location=Sequence derived from alignment at sc0000108_pilon:13750..16211- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATGATAAAGGGGATAATCTGAAGCAAGAAAACAATGATTGTCC
ACCAAAAGAAGTTGTTGATGATGATGAATTGGATGCACTGCTAGATGATG
CATTAAGTGATTTTGTTAAACCGCCACCAAAGCCTAAAAAGGTTGAGAAA
AAAACTGAACAGCATGATCAGGGCTCTGATCTTGGTAATTTTCTGGATGA
TGATGCTCTCCTAAAAATGTCAGAAGGTTGGAATGAAGTTTTACAGCAAA
TGTCTAGTGAAGATCCAGGCTTGATGGAGGAATTTGATAGCTTCCAAAAG
CAATTTCCGATGGGTGGTGCAATGGGTGGCTTTCCTGGTACAGCACCAGA
AGGTGCTAATTTTGACGAACATATGAAAAACGCATTGAAAGATTTAACCA
ATAATTTTAATGATCTGAACATGGAGGGCCAGGATTTTGGTGCAGACTTT
GGTGGTGATTTTAGTGAAATGATGAAAGAAATGCAAGCTAGTATGGAAAC
ACAACAAGGTCAAGGTGGAGCTGAGGGTGATACTATCTTTCCTGAGGGTG
ATGCTTTTATGGGCATGATGCAAGGGATGATGGAAAATTTACTTACAAAA
GATTTATTGTATCCTTCCCTGAGTGAAATCAAAGAAAGATATCCTTCATG
GTTGTCAGAAAATAAAGAAAAATTAACTCCTGAAGATTATTTGAAATATA
AAAGCCAGAATGACATTGTAGTACAGTTGTGTGATCTCTTTGAGCAAGAG
GCTGATACTGACACTGAACAAACTAAGAAAGAAAGAACTTCCAAAGTTGT
GGAGCTTATGCAGAAAATGCAGGTATTTGGTCAACCACCTGCTGATATGA
TGGCTGGTATCTCAGATTCTAATCAAATTCCTCCGATGCCACAACAATGT
TCTGTTATGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108_pilon | genome | sc0000108_pilon:13750..16211 - |
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