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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:973103..975570- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13517.1.p1 ID=MSTRG.13517.1.p1|Name=MSTRG.13517.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2468bp|location=Sequence derived from alignment at sc0000107_pilon:973103..975570- (Clytia hemisphaerica_ch_hm2_pilon)
CGCTAACATATATGGCAATGAAAAATAGTGTCATGAAAATGGCATCACGG
AATAATACGGATGAGTTTAAGAAAAATTATCATCAAGAAAAAAAAAAGTA
GTAGTAAAATACGTTTCATTGATATTTGAAATTACTCAATGAAAAGCGAT
TGATAAAAGTTTAGTACACGTTTTTTTATAAGAACAAGAAGCTTCGATGT
CCAAAATATTAAGAACAATTTAAGAACATTTTAAGGCTTTCTGGACTATA
AAATACTCACAAAATGGTGAGAATAAGAAAATTTTGAGGCTTAAAACATA
AAGTTAAGAACACCTGAAGGCTTCAAAAATTTAGGAAGTCCTTATAAAAA
ACGTGTACAATACATAAAAAAGCTATTAAAATACCGAAGCAGTAATGCAG
TGATAAATTGCTGGAATTCAATTTTATAACTTTAAAGAGCCGCGTGCGCG
TCTCCTAGGGGACTGGGTACTAGGTTTACGTAAAGGGATATTATAATGAA
ATCAGAATCTATTGATTGATGATAATCTTTTTGAGATTGACAGCTCCATT
TTTATAAAAGAATGTTTTAATGGTTTTTAAATTTCAGTTGACGTTGGAAC
GTGAAGGAGTGTACATCAAAATTAAAAAAGACGCGAAAAAAAAACTTTTT
CCAAAAACAAAACACGAAATATTTGAATATTTTTTGTTTATTTTCTCAAC
GACTTTAAAAACCAAGTTGGATCTCATCAATCATTTCAACAATCGAAATA
TACTTTATACCAAGATGGCTACAGAAGATTTGCAAAGAAAACGAGGTCAA
CTTCAACGTCAGTCCACAATCAAGGAAAACATTGCTAATGAACATTTAAT
CAAACTGGAAGAACTCTGCGCTAAACTAAATACGGATTACTTACAAGGAA
TGACAACAAAAGCAGCTAAAAAAGGACTTAAGAATTACGGATACAACATT
TACTCCAAACCAAAAACACAAACTGGATCACTGACACGTTTATTTCAGAA
AGAGCAAACTCGAAGCATGGTCGATAATTCATGGACAAAAAGAGACTGGA
ACCGGGTTTTTAATTCACGCTCCAAAGAGGAATACAACGTTGTACGGAAC
GGGACGCATGAACTTGTCCAGCGGAAAGATATAGTACCTGGGGATTTAGT
TTTGTTACAACCAAAACAAATTGTACCGGCAGATATGAGAGTGATAAGTT
ATGAAGGAGAACTTGTAGTTGATAATCGTATTATAACTGGAAATACTGCG
GAACTAAAATCAATCAGTGCTACTTCGAATGACTTTCTTTTATCACAAAA
TATGATTTTCGGATGTACTGAAATTCTGTCCGGTAGTTGTGAAGCTATTG
TGATTAAAACTGGAAATGAGACTGTTTTCGGACACTTGACGCAGTTTGCG
ACTAAAGTTAAACTGGCACGACGTCATGATAGTATGTCATTATCATCTAC
GTCATCAGGGTCAAGCAATTCTATTGGTCCATCTACATCACGTGATTTTG
AAGACAATAGCAGTCAAAGTTCCAATTCTACACCACCATCACCTAGATTT
ACTTAAATTTCATGACCTCTTTATAGATATTTTATCTTACGGTCATTGCT
ATAATATCTTCATAACTTTTTCAGAAACCAAACACAGAAAAAACTGAGGG
GTATAAAGATTAAAGGTCTTGGATAGGAAAGTTTTAAACAATAAAGAGCT
TGTCTCGAATACAAAAACGGTGCTTAGTTCTAAAAATCTTAAAACTTTTT
TTTTTTTTTTTAATCTTAAAACGGGTTTTAAAAAACTGACACCAAAATTG
ACGTCAAATAATTATAGGATCAACAATGACGTTTTTAGGCCAATTTTTTC
TTCCCGAAAGTTCTTTCCCTTTAAACTCAAGCCAAAAGCCTATTAGACAT
CATGCCATGTTTTTTTACATTGTTTGCTATATCGATTAGTGAATTTAATT
AATCACTGTACTGAGATAAAAAATGTCTCAGTAAAACTACTCAGTAAAAT
CATACGCTCTTTTAGGATTAATCGCATTACAGTTTCCCTCTTTCGTAAAC
ACTAAAGAGATAATGAAAATCAATTATCTCTTTAAGGATAAGGGAAAACT
TGTTAGCGATGACTTTATCATTAAGAATTCAAGCATTATATAAAAATTAA
CGTTATTATATATTATGAAGAGATATAATGAAAAGATGTTATGGAAATGT
AATATAAAATATTTTAGAATTAGATCATGCGTACTTGAAAACCGTGGGAA
CCATGGATTAAGCGCGTTGAATAACTTTTTATGACATCAAATATTTTTTA
AAGAAAAGGAAAAATTATATAAATTTCCTTGCTATTTCTTTTGTATATGA
TTATCTTCTACTGTACATATATCATATATAATTTTTTGAATATATTTAAA
ATGAAATACAAGTGATGTAAGATAATATCCAACAATCAGAAAATATACTT
TGAAAATTGATAAACAAA Coding sequence (CDS) from alignment at sc0000107_pilon:973103..975570- >MSTRG.13517.1.p1 ID=MSTRG.13517.1.p1|Name=MSTRG.13517.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=792bp|location=Sequence derived from alignment at sc0000107_pilon:973103..975570- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTACAGAAGATTTGCAAAGAAAACGAGGTCAACTTCAACGTCAGTC
CACAATCAAGGAAAACATTGCTAATGAACATTTAATCAAACTGGAAGAAC
TCTGCGCTAAACTAAATACGGATTACTTACAAGGAATGACAACAAAAGCA
GCTAAAAAAGGACTTAAGAATTACGGATACAACATTTACTCCAAACCAAA
AACACAAACTGGATCACTGACACGTTTATTTCAGAAAGAGCAAACTCGAA
GCATGGTCGATAATTCATGGACAAAAAGAGACTGGAACCGGGTTTTTAAT
TCACGCTCCAAAGAGGAATACAACGTTGTACGGAACGGGACGCATGAACT
TGTCCAGCGGAAAGATATAGTACCTGGGGATTTAGTTTTGTTACAACCAA
AACAAATTGTACCGGCAGATATGAGAGTGATAAGTTATGAAGGAGAACTT
GTAGTTGATAATCGTATTATAACTGGAAATACTGCGGAACTAAAATCAAT
CAGTGCTACTTCGAATGACTTTCTTTTATCACAAAATATGATTTTCGGAT
GTACTGAAATTCTGTCCGGTAGTTGTGAAGCTATTGTGATTAAAACTGGA
AATGAGACTGTTTTCGGACACTTGACGCAGTTTGCGACTAAAGTTAAACT
GGCACGACGTCATGATAGTATGTCATTATCATCTACGTCATCAGGGTCAA
GCAATTCTATTGGTCCATCTACATCACGTGATTTTGAAGACAATAGCAGT
CAAAGTTCCAATTCTACACCACCATCACCTAGATTTACTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:973103..975570 - |
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