MSTRG.13501.1.p1 (mRNA) -

Overview
NameMSTRG.13501.1.p1
Unique NameMSTRG.13501.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000107_pilon:772906..775966-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13501.1.p1 ID=MSTRG.13501.1.p1|Name=MSTRG.13501.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3061bp|location=Sequence derived from alignment at sc0000107_pilon:772906..775966- (Clytia hemisphaerica_ch_hm2_pilon)
TTTGAAATGTAGTTTTATTCTTCTTCGCTAAATTAACATAACATAAATGC
TTTATAGAAAGTACGTTTATTTTTCAGTTAAACAAAATCAAAATATTGAA
AATAAACAAACACAGCACTATCCTGTAATGTTTGTATTAAAACCGTTTAC
TACAACAACTTGGTCCAAATATGTTTATTGTAAGCATCAAATCAGACGGT
GTTTATCCTTCACCGACCTCTCCTTAGATGTCTCATTGGTTCGGAAATTG
AGGTCTTTTGAAATCAGGACTCCAACAGCCATCCAAGAAAAGGTATCAAA
TTTTGCATTTTTAGAATAAGATAAATTAAGGGAGACAGTCTTTTTTGAGA
ATGCCGAGAGAATCTTGTTAGGAAAATTATAACTTGATGGAAACTCTCAG
ATATCCTCATATTATCCTCAAAAAAAGTTCCTTCGGCTAACGCCTACTCT
CGGGTACCTAATAGCCGGGGGGGTTGGAATAAGCGGGGGGGTTGGAAAAA
ATCTCAAAACTTAATAAGCGGGGGGGTTGGAATAAAAATGTCCTGGGTGG
AAAATTTTTGAAAAGGAGGCTAATACAGCTGAATTAGGACAAAAAAGGGA
ACTTTCAAAAACATTTTCCCAAAAATTAATAAGCGGGGGGGGTTGGAATA
AGAATGTCCTGGGTGGAAAATTTTCGAAAAATTAATTAGCGGGGGGGGGA
CGGCTATTAAGTACCCGAGAGTAATGTGGTTTTTTAACGAAATGGAACAA
TACTACTCAAATTTTAGAAGTTGCACTTACTCATCTTATTTAAGTCATAA
GAATTGCAGCTATTTCCTTTACCATCTTGTGTTTTCAGTGCTGTGAGCTA
ATGTTGAAGGGACAAAATCTGGTGTTGAATTCAGAGACCGGAAGTGGCAA
AACCCTTGGTGAGCAAAATCATTTCAGTACTGTCAAGAACTGATTCAAGA
AAAATGTTCCTTGTAAAAAGATCATTGCTTTATTTCTGAAGAGTGGGACA
AGAAGCTCTTTGAAGTCGCTTGCTTCGCATATTTTGTATTTGATTATCTT
TCAGCGTATGCTGTACCAATAGTTCAAAGGATTCAAGAAAGGAGGAGATT
AAAGCAACAAAAACCACACCCTTCAGTTGTTGTTCTTCTACCCAGTGTTG
AATTGTGTTATCAGGTATTTGTACTAATATTTTCCAAAAATTTTATTTTT
ATTTATTTTTATCTACAGTAACTACGAGTTGTTGACCTCATTTAGGTATA
ATTAGTCCTTACGTAATTGCTTAAGCTTTTAAGGTTTTAATTTGTTGTCT
TGGCATGATTGGCTGACTAACCCAAAAATTACTAATTTATATCGCTTTTT
GGTCTTGGTCTTTTATCATCACATTCGACTATCTCTTTTTTTTGAAGGTT
GGAGATGTCTTTCGGTCTATGTTAGGAGTGAACGTTTCTTTAGTCACCAG
TGATATTCCAATGCGTTTGAAGAATACAGATGTTGTTGTGACCACACCCC
ACGCCCTCTCCACCTACCCTTATAATGTTTTGAACGAAACGGAAACGATC
ATTATCGATGAAGCCGATATTTTAATCGATAAACGAATCGGGAAACATGG
TCGTAAGGATCCTTTGTTTCGTCTTATGAATCATATGTTGGATATGGAGA
ATAAGACATTTGACCACGATCGACAGTTTATTTTTGTTGGTGCGACCATG
CCTGATTCTGAGGTGAAGAAATCACGTAAGGCCATGACATATATACGACA
TTGGGTTCCGGATATACAGATGGTTCGTGGAGACGAAGCTCATATGATGC
TGTCCAGGCTAGATATGATTTATATGGATGTTGATAGAGGAAACAAGTTA
AAATATTTCGTTAAAGCTGTCTCACAGCTTGGTACTGAGAATTTCAAAAT
GCTCGTTTTCGTTGATACTGTAAAAACAGCTCAAAAGTTATTTCAGGATT
TGACTCGGATCGATCAGCACCATGGATCCACTATTGAAAAAGACACATTC
CCAGAACAATTATTACTTTTTCAGAAGAGATGGACTGATAGCTTGTTACT
TTTACATCGTGACGTTTCAAGAGATGACCGTCTGACTTCTTTGGATTATT
TTAATAAATCAAGACAATGTATACTTATTACGACGGATGTCTCAGCTAGA
GGACTTGATTTCCAAGATGTGGATGTTGTCTTACAGTTCGATTTCACGAA
GAATGTTACTGATCTGATACATCGCGTTGGTAGAACTGCACGCATGGGAA
AACAAGGCAAAGGTATGGTTTTCCTTTTATTTTTGGATTCTAGATAGATT
CACTACCGTAGATTTTCGTAACTAAGAACCTCTGATCCCCCTAATGGGAC
ACTTCAGGCAATTTTTTTCCATTTCATGCATTCATACCCTCATTTATGAT
TCATTTTATACTTTCATTTTCATTTATCGTTCATTATCTAGTTATCAATT
TTGTTACCACTGAAGACCAAAGACTTGCCTCACTTATTCAAGAATACTCT
GCATCTGGTGAAAGTTTAGATCGTCTTTTCAGCCGACGCAGAGGACTTGG
GAAAGCACTTAAGAGGATAGATGAAGCCAGCACTGAAGCCGCTTTATGAG
ACTTTTCTATATTATTTTTTTATCGTTTTTGAATTTTTGCTACTCCTATT
TTCATATACATGGAGCGAGGATTGTAACGATCGCTTTTGTGACCGTAACA
GCCTTACTTTCATTTTCAAAGATCTGCAATGGTTCGAGCTAAGTCCTAGG
TTTACTGACCTGGTAGGCTTTTGGTTAGTTTCAAATAATAAAACCTGGTC
TACTCAGTCAGTAAGAAATCTAAGAAATGAGATGTTAAAAGCCGTATCCA
TTTTAACGGGTGACATAATTAAGGAGGAAAACCATTCAGTTTAATTACCA
TACACCGCACAAGTTGTCAAGGCAACGGGTCAAGGTTTAGATTGATAGAT
GAGGTTTATTAAATGACATTTATTTTTGTACATTACTTATTTAGAAAGAG
GATTTTTTATGTTTGTATAAATCACCTTTATGTCAGTAAGAAAAATTTGA
TCGTTTCGAAA

Coding sequence (CDS) from alignment at sc0000107_pilon:772906..775966-

>MSTRG.13501.1.p1 ID=MSTRG.13501.1.p1|Name=MSTRG.13501.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=7245bp|location=Sequence derived from alignment at sc0000107_pilon:772906..775966- (Clytia hemisphaerica_ch_hm2_pilon)
TTATCAATTTTGTTACCACTGAAGACCAAAGACTTGCCTCACTTATTCAA
GAATACTCTGCATCTGGTGAAAGTTTAGATCGTCTTTTCAGCCGACGCAG
AGGACTTGGGAAAGCACTTAAGAGGATAGATGAAGCCAGCACTGAAGCCG
CTTTATGAGTTGGAGATGTCTTTCGGTCTATGTTAGGAGTGAACGTTTCT
TTAGTCACCAGTGATATTCCAATGCGTTTGAAGAATACAGATGTTGTTGT
GACCACACCCCACGCCCTCTCCACCTACCCTTATAATGTTTTGAACGAAA
CGGAAACGATCATTATCGATGAAGCCGATATTTTAATCGATAAACGAATC
GGGAAACATGGTCGTAAGGATCCTTTGTTTCGTCTTATGAATCATATGTT
GGATATGGAGAATAAGACATTTGACCACGATCGACAGTTTATTTTTGTTG
GTGCGACCATGCCTGATTCTGAGGTGAAGAAATCACGTAAGGCCATGACA
TATATACGACATTGGGTTCCGGATATACAGATGGTTCGTGGAGACGAAGC
TCATATGATGCTGTCCAGGCTAGATATGATTTATATGGATGTTGATAGAG
GAAACAAGTTAAAATATTTCGTTAAAGCTGTCTCACAGCTTGGTACTGAG
AATTTCAAAATGCTCGTTTTCGTTGATACTGTAAAAACAGCTCAAAAGTT
ATTTCAGGATTTGACTCGGATCGATCAGCACCATGGATCCACTATTGAAA
AAGACACATTCCCAGAACAATTATTACTTTTTCAGAAGAGATGGACTGAT
AGCTTGTTACTTTTACATCGTGACGTTTCAAGAGATGACCGTCTGACTTC
TTTGGATTATTTTAATAAATCAAGACAATGTATACTTATTACGACGGATG
TCTCAGCTAGAGGACTTGATTTCCAAGATGTGGATGTTGTCTTACAGTTC
GATTTCACGAAGAATGTTACTGATCTGATACATCGCGTTGGTAGAACTGC
ACGCATGGGAAAACAAGGCAAAGCGTATGCTGTACCAATAGTTCAAAGGA
TTCAAGAAAGGAGGAGATTAAAGCAACAAAAACCACACCCTTCAGTTGTT
GTTCTTCTACCCAGTGTTGAATTGTGTTATCAGTGCTGTGAGCTAATGTT
GAAGGGACAAAATCTGGTGTTGAATTCAGAGACCGGAAGTGGCAAAACCC
TTGATGCTTTATAGAAAGTACGTTTATTTTTCAGTTAAACAAAATCAAAA
TATTGAAAATAAACAAACACAGCACTATCCTGTAATGTTTGTATTAAAAC
CGTTTACTACAACAACTTGGTCCAAATATGTTTATTGTAAGCATCAAATC
AGACGGTGTTTATCCTTCACCGACCTCTCCTTAGATGTCTCATTGGTTCG
GAAATTGAGGTCTTTTGAAATCAGGACTCCAACAGCCATCCAAGAAAAGT
TATCAATTTTGTTACCACTGAAGACCAAAGACTTGCCTCACTTATTCAAG
AATACTCTGCATCTGGTGAAAGTTTAGATCGTCTTTTCAGCCGACGCAGA
GGACTTGGGAAAGCACTTAAGAGGATAGATGAAGCCAGCACTGAAGCCGC
TTTATGAGTTGGAGATGTCTTTCGGTCTATGTTAGGAGTGAACGTTTCTT
TAGTCACCAGTGATATTCCAATGCGTTTGAAGAATACAGATGTTGTTGTG
ACCACACCCCACGCCCTCTCCACCTACCCTTATAATGTTTTGAACGAAAC
GGAAACGATCATTATCGATGAAGCCGATATTTTAATCGATAAACGAATCG
GGAAACATGGTCGTAAGGATCCTTTGTTTCGTCTTATGAATCATATGTTG
GATATGGAGAATAAGACATTTGACCACGATCGACAGTTTATTTTTGTTGG
TGCGACCATGCCTGATTCTGAGGTGAAGAAATCACGTAAGGCCATGACAT
ATATACGACATTGGGTTCCGGATATACAGATGGTTCGTGGAGACGAAGCT
CATATGATGCTGTCCAGGCTAGATATGATTTATATGGATGTTGATAGAGG
AAACAAGTTAAAATATTTCGTTAAAGCTGTCTCACAGCTTGGTACTGAGA
ATTTCAAAATGCTCGTTTTCGTTGATACTGTAAAAACAGCTCAAAAGTTA
TTTCAGGATTTGACTCGGATCGATCAGCACCATGGATCCACTATTGAAAA
AGACACATTCCCAGAACAATTATTACTTTTTCAGAAGAGATGGACTGATA
GCTTGTTACTTTTACATCGTGACGTTTCAAGAGATGACCGTCTGACTTCT
TTGGATTATTTTAATAAATCAAGACAATGTATACTTATTACGACGGATGT
CTCAGCTAGAGGACTTGATTTCCAAGATGTGGATGTTGTCTTACAGTTCG
ATTTCACGAAGAATGTTACTGATCTGATACATCGCGTTGGTAGAACTGCA
CGCATGGGAAAACAAGGCAAAGCGTATGCTGTACCAATAGTTCAAAGGAT
TCAAGAAAGGAGGAGATTAAAGCAACAAAAACCACACCCTTCAGTTGTTG
TTCTTCTACCCAGTGTTGAATTGTGTTATCAGTGCTGTGAGCTAATGTTG
AAGGGACAAAATCTGGTGTTGAATTCAGAGACCGGAAGTGGCAAAACCCT
TGATGCTTTATAGAAAGTACGTTTATTTTTCAGTTAAACAAAATCAAAAT
ATTGAAAATAAACAAACACAGCACTATCCTGTAATGTTTGTATTAAAACC
GTTTACTACAACAACTTGGTCCAAATATGTTTATTGTAAGCATCAAATCA
GACGGTGTTTATCCTTCACCGACCTCTCCTTAGATGTCTCATTGGTTCGG
AAATTGAGGTCTTTTGAAATCAGGACTCCAACAGCCATCCAAGAAAAGTT
ATCAATTTTGTTACCACTGAAGACCAAAGACTTGCCTCACTTATTCAAGA
ATACTCTGCATCTGGTGAAAGTTTAGATCGTCTTTTCAGCCGACGCAGAG
GACTTGGGAAAGCACTTAAGAGGATAGATGAAGCCAGCACTGAAGCCGCT
TTATGAGTTGGAGATGTCTTTCGGTCTATGTTAGGAGTGAACGTTTCTTT
AGTCACCAGTGATATTCCAATGCGTTTGAAGAATACAGATGTTGTTGTGA
CCACACCCCACGCCCTCTCCACCTACCCTTATAATGTTTTGAACGAAACG
GAAACGATCATTATCGATGAAGCCGATATTTTAATCGATAAACGAATCGG
GAAACATGGTCGTAAGGATCCTTTGTTTCGTCTTATGAATCATATGTTGG
ATATGGAGAATAAGACATTTGACCACGATCGACAGTTTATTTTTGTTGGT
GCGACCATGCCTGATTCTGAGGTGAAGAAATCACGTAAGGCCATGACATA
TATACGACATTGGGTTCCGGATATACAGATGGTTCGTGGAGACGAAGCTC
ATATGATGCTGTCCAGGCTAGATATGATTTATATGGATGTTGATAGAGGA
AACAAGTTAAAATATTTCGTTAAAGCTGTCTCACAGCTTGGTACTGAGAA
TTTCAAAATGCTCGTTTTCGTTGATACTGTAAAAACAGCTCAAAAGTTAT
TTCAGGATTTGACTCGGATCGATCAGCACCATGGATCCACTATTGAAAAA
GACACATTCCCAGAACAATTATTACTTTTTCAGAAGAGATGGACTGATAG
CTTGTTACTTTTACATCGTGACGTTTCAAGAGATGACCGTCTGACTTCTT
TGGATTATTTTAATAAATCAAGACAATGTATACTTATTACGACGGATGTC
TCAGCTAGAGGACTTGATTTCCAAGATGTGGATGTTGTCTTACAGTTCGA
TTTCACGAAGAATGTTACTGATCTGATACATCGCGTTGGTAGAACTGCAC
GCATGGGAAAACAAGGCAAAGCGTATGCTGTACCAATAGTTCAAAGGATT
CAAGAAAGGAGGAGATTAAAGCAACAAAAACCACACCCTTCAGTTGTTGT
TCTTCTACCCAGTGTTGAATTGTGTTATCAGTGCTGTGAGCTAATGTTGA
AGGGACAAAATCTGGTGTTGAATTCAGAGACCGGAAGTGGCAAAACCCTT
GATGCTTTATAGAAAGTACGTTTATTTTTCAGTTAAACAAAATCAAAATA
TTGAAAATAAACAAACACAGCACTATCCTGTAATGTTTGTATTAAAACCG
TTTACTACAACAACTTGGTCCAAATATGTTTATTGTAAGCATCAAATCAG
ACGGTGTTTATCCTTCACCGACCTCTCCTTAGATGTCTCATTGGTTCGGA
AATTGAGGTCTTTTGAAATCAGGACTCCAACAGCCATCCAAGAAAAGTTA
TCAATTTTGTTACCACTGAAGACCAAAGACTTGCCTCACTTATTCAAGAA
TACTCTGCATCTGGTGAAAGTTTAGATCGTCTTTTCAGCCGACGCAGAGG
ACTTGGGAAAGCACTTAAGAGGATAGATGAAGCCAGCACTGAAGCCGCTT
TATGAGTTGGAGATGTCTTTCGGTCTATGTTAGGAGTGAACGTTTCTTTA
GTCACCAGTGATATTCCAATGCGTTTGAAGAATACAGATGTTGTTGTGAC
CACACCCCACGCCCTCTCCACCTACCCTTATAATGTTTTGAACGAAACGG
AAACGATCATTATCGATGAAGCCGATATTTTAATCGATAAACGAATCGGG
AAACATGGTCGTAAGGATCCTTTGTTTCGTCTTATGAATCATATGTTGGA
TATGGAGAATAAGACATTTGACCACGATCGACAGTTTATTTTTGTTGGTG
CGACCATGCCTGATTCTGAGGTGAAGAAATCACGTAAGGCCATGACATAT
ATACGACATTGGGTTCCGGATATACAGATGGTTCGTGGAGACGAAGCTCA
TATGATGCTGTCCAGGCTAGATATGATTTATATGGATGTTGATAGAGGAA
ACAAGTTAAAATATTTCGTTAAAGCTGTCTCACAGCTTGGTACTGAGAAT
TTCAAAATGCTCGTTTTCGTTGATACTGTAAAAACAGCTCAAAAGTTATT
TCAGGATTTGACTCGGATCGATCAGCACCATGGATCCACTATTGAAAAAG
ACACATTCCCAGAACAATTATTACTTTTTCAGAAGAGATGGACTGATAGC
TTGTTACTTTTACATCGTGACGTTTCAAGAGATGACCGTCTGACTTCTTT
GGATTATTTTAATAAATCAAGACAATGTATACTTATTACGACGGATGTCT
CAGCTAGAGGACTTGATTTCCAAGATGTGGATGTTGTCTTACAGTTCGAT
TTCACGAAGAATGTTACTGATCTGATACATCGCGTTGGTAGAACTGCACG
CATGGGAAAACAAGGCAAAGCGTATGCTGTACCAATAGTTCAAAGGATTC
AAGAAAGGAGGAGATTAAAGCAACAAAAACCACACCCTTCAGTTGTTGTT
CTTCTACCCAGTGTTGAATTGTGTTATCAGTGCTGTGAGCTAATGTTGAA
GGGACAAAATCTGGTGTTGAATTCAGAGACCGGAAGTGGCAAAACCCTTG
ATGCTTTATAGAAAGTACGTTTATTTTTCAGTTAAACAAAATCAAAATAT
TGAAAATAAACAAACACAGCACTATCCTGTAATGTTTGTATTAAAACCGT
TTACTACAACAACTTGGTCCAAATATGTTTATTGTAAGCATCAAATCAGA
CGGTGTTTATCCTTCACCGACCTCTCCTTAGATGTCTCATTGGTTCGGAA
ATTGAGGTCTTTTGAAATCAGGACTCCAACAGCCATCCAAGAAAAGTTAT
CAATTTTGTTACCACTGAAGACCAAAGACTTGCCTCACTTATTCAAGAAT
ACTCTGCATCTGGTGAAAGTTTAGATCGTCTTTTCAGCCGACGCAGAGGA
CTTGGGAAAGCACTTAAGAGGATAGATGAAGCCAGCACTGAAGCCGCTTT
ATGAGTTGGAGATGTCTTTCGGTCTATGTTAGGAGTGAACGTTTCTTTAG
TCACCAGTGATATTCCAATGCGTTTGAAGAATACAGATGTTGTTGTGACC
ACACCCCACGCCCTCTCCACCTACCCTTATAATGTTTTGAACGAAACGGA
AACGATCATTATCGATGAAGCCGATATTTTAATCGATAAACGAATCGGGA
AACATGGTCGTAAGGATCCTTTGTTTCGTCTTATGAATCATATGTTGGAT
ATGGAGAATAAGACATTTGACCACGATCGACAGTTTATTTTTGTTGGTGC
GACCATGCCTGATTCTGAGGTGAAGAAATCACGTAAGGCCATGACATATA
TACGACATTGGGTTCCGGATATACAGATGGTTCGTGGAGACGAAGCTCAT
ATGATGCTGTCCAGGCTAGATATGATTTATATGGATGTTGATAGAGGAAA
CAAGTTAAAATATTTCGTTAAAGCTGTCTCACAGCTTGGTACTGAGAATT
TCAAAATGCTCGTTTTCGTTGATACTGTAAAAACAGCTCAAAAGTTATTT
CAGGATTTGACTCGGATCGATCAGCACCATGGATCCACTATTGAAAAAGA
CACATTCCCAGAACAATTATTACTTTTTCAGAAGAGATGGACTGATAGCT
TGTTACTTTTACATCGTGACGTTTCAAGAGATGACCGTCTGACTTCTTTG
GATTATTTTAATAAATCAAGACAATGTATACTTATTACGACGGATGTCTC
AGCTAGAGGACTTGATTTCCAAGATGTGGATGTTGTCTTACAGTTCGATT
TCACGAAGAATGTTACTGATCTGATACATCGCGTTGGTAGAACTGCACGC
ATGGGAAAACAAGGCAAAGCGTATGCTGTACCAATAGTTCAAAGGATTCA
AGAAAGGAGGAGATTAAAGCAACAAAAACCACACCCTTCAGTTGTTGTTC
TTCTACCCAGTGTTGAATTGTGTTATCAGTGCTGTGAGCTAATGTTGAAG
GGACAAAATCTGGTGTTGAATTCAGAGACCGGAAGTGGCAAAACCCTTGA
TGCTTTATAGAAAGTACGTTTATTTTTCAGTTAAACAAAATCAAAATATT
GAAAATAAACAAACACAGCACTATCCTGTAATGTTTGTATTAAAACCGTT
TACTACAACAACTTGGTCCAAATATGTTTATTGTAAGCATCAAATCAGAC
GGTGTTTATCCTTCACCGACCTCTCCTTAGATGTCTCATTGGTTCGGAAA
TTGAGGTCTTTTGAAATCAGGACTCCAACAGCCATCCAAGAAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13501MSTRG.13501Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13501.1.p1MSTRG.13501.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13501.1.p1.exon5MSTRG.13501.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13501.1.p1.exon4MSTRG.13501.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13501.1.p1.exon3MSTRG.13501.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13501.1.p1.exon2MSTRG.13501.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13501.1.p1.exon1MSTRG.13501.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107_pilongenomesc0000107_pilon:772906..775966 -