MSTRG.13490.7.p2 (mRNA) -

Overview
NameMSTRG.13490.7.p2
Unique NameMSTRG.13490.7.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000107_pilon:627972..635307-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13490.7.p2 ID=MSTRG.13490.7.p2|Name=MSTRG.13490.7.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7336bp|location=Sequence derived from alignment at sc0000107_pilon:627972..635307- (Clytia hemisphaerica_ch_hm2_pilon)
CGTTTCTTTCCAATAGTGACAAATAAAATAAAGAAAAGAAATCAAAATGG
CACAAAATATGTTTTTATATTGGGGATCTGGTAGCACGCCATGTTGGAGG
GCTATGATTGTTTTGGAAGAAAAGCAGTTATCTGGTTATGGTCAAAAATT
GGTTTCCTTCTCAGCCAAAGAACATAAATCTGAAGAAATCATGAAAATCA
ATCCTAGAGGACAGGTATTTATCAATTACATTTAGTAGTGTAGACAAGGG
GGAGGGCGCAAAGTTTGTGTAGAAGAGCAGATTTTTATGACATGGTAATT
ATCTTTTTGGACCTACCCCGTTGGAGGTCCTATAAATATTAACCTGTGTT
CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
TTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTTCGTCTGTTACCAACTTTTCTCAGGATTGAATTAT
AGGAATCTTTTGATTTTTGGTACAAAGGTGCAAAATGTGACAGAGCCCGA
TTTTCGAAGAAAAAATTTTGGGGCAAATTTGGGCCAAAAAACGGCTAAAA
AACGGGTTTTTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTCTGAT
TTTTTGCATGAAAGTAGGGTACGTCATCATAGTTAAAAGATGGCTCAAGC
AGATTTTTGCAAAAAAAATTTGTTGGCTCAAAAAACGCATTTTCATCTAT
AAGAATCACTATTAATAAGCATACATCAATGTTCTTTTTCAAATTACTCA
ATTTTTTTATGAGATAGATGTTTTTTTTTGCTCATGAGGGCTTACTTTTG
AAGAATATGTGTGTTTAGACATGAAATTTTGGTTGCTTGGCGTGTTTTTA
TAGAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACATTATCGCAAT
TACTTAGGTAATCAACTTACTTTTCTCGAGATTGGCTCTTTCATGCTTTA
TGATTTTTGGCACAAAGATGCATAACTATAAACCCGTCGAATGTGACGGA
GCTTGATTTTCGAAAAAAAATGTTTTTGGGCAAATTTGGGCCAAATAACG
GCTAAACAACAGGTTTTTTGGAGTTTGTGAAAAATTGGATCATTGTTTCT
TTCTGATTTTTTGCATGAAAGTAGGTAAAAGATGGCTCAAGCAGGTTTTT
TGAAAAAAAGGATTTTTCATCCCAAAAAACGCATCTTTATCTATAAGAAT
CACTATTAATAAGCATACATCAATGTTCTTAGCCAAATTACTCAATTTTT
TGATGAGATAGATGTTTTTTTTGCTCACGAAGTCTTGAATATGAAAGAAT
ATTTCAAGAGCATGGCATGAAACTTTGGTTTCTAAACGTTTTTTTTATAA
GAAACAAACGGAAATTTTAATAGATCATCACTATTTGTGTTCTGAATGAT
TGTTTAATGGTCACGCTCACGTAGATATCAATTATAAATGTGTTAAATGC
ATAACCAGGTAGGTCCATAAAAGTATCACTTGTTATATTTTGAATAGATA
AATTACAGTGTCATGAAAATCTCCACAAATTTTGCGCTCCTCCTGTCTAC
GCTACTGACGTTATCGGATAAATCTTTGTGAGATTTAATTTCGCTAATCG
GGGTTTAGAATAAAATTAGAAGAATCTTCTGTTTTAGTTTTGAACTAAAA
TTCCTATATTTGATTTTTGACCTTTTGTAAAAACTAACTAATTTAAAAAA
TGAAGCTATACTTTACTATATTTTTGAAAAAACTTCTTTAACCAAGCAGA
ATTTTTGTTAATTTTATGTTATGTATCTCCATGTTTCAGGTGCCAACTTT
CAAACACGGTGATATTGTTTTGAATGAGTCGATGGGAATTTGCCATTATT
TGGAGGTACAACTAAAGAACAAATTTTACAAGCATTATTCTTAGATTTTG
TCCCAAGAAAAATTGCTCAACATTTACCACCCCTCACTATATTTGCCATA
CAAGGAAGATTTGTATCTTGAAAAATTGAAAAGATAAAGCTAATTTGAAG
AATTTCATTTTCTGATTTTGGCGTAAATTCATTACCCTTAAGTCTACCCC
TAATCTATTTTCCACCATGTGGAAATCATGTCAATTTTAATAGACAAGTA
CTTTGAGGGTGGTTTGTTTGTACATGGTAGAGTACACTCAAAGTTGATGG
ACTTTTATTAACTGATATAATCAAGAGTTAGTTGGATTTCAAACTCAGAA
CTTCATGATGCTTTCACGCCAATCTTGAGTTAAAATTATTGACTAATAAA
AAATTATTATAAATTCTGTGTAATTTTTAGAGTCAATTCAAGAATCAGGG
AACGAAATTGATACCGGATAATGCAGAGAAGCAGGCCCTTGTGTTACAAC
GAATGTATGAGGTGAGAAAGTTCTTTTTGATTTTTTGAATGTCTAAATCA
AAGTGGTTATTTGTACAATGCTTCGTGTGATGCATATTGAACGTTTTGTA
AAAATGAACATGGGCCCGTCGACAGAGCTCAATTAGATACATAGCGATAA
GTATGTTTTAGGCTCACATACTTCAAATGGCTCGCCGAGGCCCATTATAT
AAAAAAGCTCGTGAGATGCCTATTTCACTTATCGCTTAAACAAATCGGAT
TTTTTACAATTTTCCATCCTTCAGGTTGAAAATATCATTGACAAAGCAAA
CCGTAAAATCATGTATTACATATGGTATAATAAAGAAAGCTTGGATGAGA
ATCTACTCACTGAACGACGACAAGCTCTAGGTACAGAGCTGAAAATCTGG
GAAGAATTTCTGACAAACAAGAAGTACATCACAGGGGATGAGTTCACAAT
GGCTGATGCATTCTTTTTCCCACAAATCGCTATCTTGGTACGTGGAAGTC
TATCTTTTGAGAACCGACCCAATTTGAAACGTTACTATGAAGAGTTATCA
CAACGCCCTTCCATAATGGCTTCTTGGCCTCCACATTTTAAGGATACTCC
ACCTACGGAAATGTTCACCAAAATCTAAGAAGGTTTTTCCCTCTTTTTTC
TTAGGCTAGTTATTTTTTCTTTACTTAGGGTATATTTTTGGTTGTGATTT
TTAATTTTTTGTACTTTTTTTACTTTCGTTTTGTTATAAGAACTACCTTG
AAATTGAAACATTTTTTCATGACTTTGTACAGTAACTGTACAGTTTTCTT
CTTCATTTTCGCCTACCTAAACATTTTTCACTGAAGCTTCCTCTTACACG
TCATCGAGATTTAACACCAGAAGTCACAATGGTGTAAGATTAGGTAAATG
TAGTATGAGGAGATTATCTTTACATTTTGTTGTGGTTTACTACAGATTTA
TATTTCTTTATCTTTATTCAGTCTAACCATTACTAGATTTTCTCATTAAT
AAAGGACAAGCCAATCTTTTCGTGTTTTTAAATCTCATCATTCTCATTGA
TATTATAATTTCGTTAGCTTCTCTCTTGACTATTGTGTTTCTCTCTATAA
AATACGTAGCAAACACTTATAAACCTTATTTGAAAAAAATGGTTTGCTCC
TTGCATAAAGCTGTGTATGTTGTTCAAATTTATTTTATGTGTTAAAAAGT
TTCTTCTTATCTTTCCTTGAATGAAAACATATTTTCTTTGCTAAAATATT
AATGGAGAATCAAAGAGGAGAATGTTAGAATAGTGAGTAGGGAACCCTAA
CAGCCAGATATTAGGGTTGTTTGAAAGAGAAATCTTGAGAGTTTTCTGCT
CGTGCTGTTTGATTTTTCATGAAAGTTGTTTCCTTCTTTAGTAAAAGATT
CAGATTTGATTTATGTTCAAGAGTGGTGAAAGTTTGCATGGTGTAAATGA
AAGGGCTGGAGGCTAAATTTTCTAAGAGCTTCAGAGTGTTTTGTTGAATT
TTATCGGTCTTTTGGAAAAAAAGCCCATTCTTATGACTTGGGTTTCATTT
CTATTATATTGATGATTTTAACTTGGAAGGAAAAATTTATACACATCACA
CACGATTATTCTTCTTTACTAGCAAGAAAAACTTCATTCAGAAATTTGCT
GACGGTGTTAAAAATTTAATCGTAAGGTTTTGTATAACGTCTAAAGATTA
TTAGAGCTTTTGAAATTCCCTTTCATTCATATAATCATACGAGTTTTTTA
GAGGTTTTTTATAAGAAGAGACAAAAGAAAGGTGTAAAAAAATATTTTTC
GAATAGATACCTTACGATATTGCCCTGGTACTGCTTAATAGTAAATTTGA
AAATTATTAGAATTAACAACAATTTCAGAACGTTTCAAAAAAAATATGTG
TAATTTGATTTGGTGTTTCCCAATTTTCTTAGGATATAAAGTTGAAGAAT
AAGAATGTCTGAAGCATACGATACAGGCCCCCCACCAGCAGCAGCCCAAT
CATCTGATGGAGGGATCAGGCTGAATCCTGGTTTCATTAGGACACCACCT
GGTCTCTTACTGCTGATCAATCTAGTAAGTCAACATTTTTGGCTGGAACT
GATAATCAACGTTTTTAAAACCCAACAGAAATTTTGAGCTTTAATGACAA
TCAATAGAATTTGAAATCCCCACTTTATTTAAAACACTCTTATTATTCTA
TTTTCATTGGTACTTAGCCCCTTCAAGTGTTCTCTATAAATGGTCCCGAG
TCACTGAGACCATAGTCCGTATAAAAAACCCTGGTCTGGAAGCCTTTTGT
TTCTTTCCATTGTTTCTTACTTGAACTTGTGTCGAGAAATTAGTTTGTTT
TGCTCACTTTTTAAACATGTGATAAATCTTAAACCAATCACAAGAGGAGT
ACTTGGTAACGTGATCAAAAACTGAGCAAATCGATTTTTATCTTTGATAT
TAACAAAGGGAAAAGCTAACAAAAAGTTACAACAATAAGCTTTCAGACCA
GTGTTTTTTATAAGGACTATGCTGAGACAGGGATAAGGAATATTCAGGTT
CTGTAAGCCCGTTTCTGGTGCTGATAATTTTAAAGTTTTCCTGATCGCAC
AAACTCTTTCCTATGCCCTTAGTTCGCCTTTTTATTAATGCGACAGCGAA
GAGAGATTGTATCATACACTTAAGTAAAATCAAAATAGTGGTGCAAGTGG
CTCTTAGTACGAGATATCGTAAAATATGCTTACTCAGCAAAATTTATTGA
TTTGAAAACCCAAATATCTCATGATCTCGGGATCAGAACACAGTTAGCGT
TTTAAAAACAATCCCTTTATCTTTTTTTTTAAATACTGTTTGCAGGTTAT
TAGTCGTAAAAGTCCTAGATGGTTTGCACAAATTGATTTATATACTGTAA
TGATAAAATTTTAATAAACGGGGGGTCCTAGTTACAGAGATCAGGAAATT
TGAAAAATAGAGAATTCTTATAAGTTCCTGAGGAGAAGGGACTAAAAAGA
ATTACAAAATTTCAATTAATAACCCTTATGCCCATTATTACTTTAATTAA
ATTCATTTTCCCCAGGTGTTATTATTTTTGTCATGGTGCATCATGGCAGG
CTGGAGAGGGGAAGTACATTGGACTGTGGAAAATGATTTTGAAGGAGGAA
GTGGATTTTATTTGGCTACAACACTTATTCCATGGTTTATCCTTCTCGTA
GTTTTTGTTCTCATGTTGTTCAATATCCACAAGAAGATTCCAATCAATTT
TCCTGTAACGGTGAGTGTGTCGTACGTTTTTGCTTAGCAGACAAAGAGAC
AGAGAGAGAAAGCGTAGAGGCATCCGGCTACAATCAACATCGAGAATTTT
GCCTATTTCCTCGTTTTTCGAAATTTTAAGTTCGTGCGAGAAAGTTGCTT
TTGGGCTATCTGTTAAATACAATCAAATATTTCCATTTGGAAGGAGTTTA
TAGACTTCCAGGTTATAATCTGAGCCTTATTGGACCATCTTTGAACTTTT
GGATCCTCAGATCGTTGGATTGTTAAATCTCAGAGTTAAAACTCAACCCT
TCCAACCTTCCTAGAATTTTAAAGACTCGCGGTTTTTTTACACAAACAAT
CTCTAGAGACTCTAATGCTATGATTTTTCGAATCCTTTTATTTTCCTCCT
TTCTTTAGCTAATGCTTAACTGCGTTATATGGGCAGTATTACTGTTTATT
GCTTCGTGTATTGTTGGAGCGAAAGCTGATAAATGGAATGGTCATAGTTC
CTTGTGTGAAGTTTATGCTTGTAATCATCTCGGAGCTGCTTGTGTAAGTC
TGAACTGGATTTTAAATTTCATTACATCCACTACATCAATTCCCAGGGGG
TGGGGTACTTACAGTAAGCAAATGTAGGGTACGATATGTGTCGCCTAAGG
GTGCCTTTTTTAGAAGTCACAACCCTAGTAATCCCCTCCCCCCCCGGGGG
CATCCATCTATTTTAGACTCTAAGGGATCTTAGCTGTCCATTTTCTAACT
ATCTTTTATGTGGGGATTTTTCAATTGTTTAGCTCAAAGTATAGTAGAAA
GTTATATTGTCTTTCCCAATGCAATTCTAGGTAGAACGCAATGAAATAGT
GACATTTCTCTTTTTCACCGGGGCTGACCTATCTAACAATACAAATTCTA
TTTTAAATATTTCTGAAATTTTCCCAGGTTTATGATGTTTAGACCCCTAG
ACCACAATATCAAAATATCCCTGAAACAGGCTGAATAACGCTCATAGATT
TATAAAACTCAAAGGGCTAATTGTCGGGCTTTAAGCCATCGCAGGCAAAA
AAAAGTTAATATCGGCAAAAATATTGTTGCTATTGTTTTCGAAAACCCAC
GAAAGCTTCTTATTGGTCAACCGCTGAAATTCTATTGTAATGTCACGCGA
CTTAGGTAGAATTTCCTACCTAACCACGGCACACTTTTCAGCAAAAGTAC
GCCATCTAGTCCTTCGGGCATTATAAATCTATGGTTGGGCTTTTTGAGCA
AACATGTTAAATTATGAATAACTTTTTCTTTTACAGGCTTTTGGAATTTT
CTCGGTGGTTGGATTAGGAGTTCAAGCATTTTTACACTTCCGAGAATGGA
GAAGTCCTTGAGCATGAAAATCCAATACTAAAAATCAATCACCAGATTTT
ATGACAATACTATGAGTTCATATTTTGAGAACAAAAATTGAATGAGAAGA
AATAAAAAGAAGATGGTGTTTGAAATTTAAAGACATTTTATAATCAGTAA
CACAAAAATCTTTAGAAATGATTCAAATGGACATATTAGTCGTAGATTTT
GTAAATTTAGGGCACATTTTATTTAGGAAATCTTTTTGTTGTATTTATGC
AGTCGTTGTGTTCGTTCGAAAATTCACTTCAATCAATTAATATTGTATAT
TTAACAAATTATTGTTAGGGAAATTGTAAACATGCA

Coding sequence (CDS) from alignment at sc0000107_pilon:627972..635307-

>MSTRG.13490.7.p2 ID=MSTRG.13490.7.p2|Name=MSTRG.13490.7.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000107_pilon:627972..635307- (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTTGGAATTTTCTCGGTGGTTGGATTAGGAGTTCAAGCATTTTTACA
CTTCCGAGAATGGAGAAGTCCTTGACTAATGCTTAACTGCGTTATATGGG
CAGTATTACTGTTTATTGCTTCGTGTATTGTTGGAGCGAAAGCTGATAAA
TGGAATGGTCATAGTTCCTTGTGTGAAGTTTATGCTTGTAATCATCTCGG
AGCTGCTTGTGTGTTATTATTTTTGTCATGGTGCATCATGGCAGGCTGGA
GAGGGGAAGTACATTGGACTGTGGAAAATGATTTTGAAGGAGGAAGTGGA
TTTTATTTGGCTACAACACTTATTCCATGGTTTATCCTTCTCGTAGTTTT
TGTTCTCATGTTGTTCAATATCCACAAGAAGATTCCAATCAATTTTCCTG
TAACGATGTCTGAAGCATACGATACAGGCCCCCCACCAGCAGCAGCCCAA
TCATCTGATGGAGGGATCAGGCTGAATCCTGGTTTCATTAGGACACCACC
TGGTCTCTTACTGCTGATCAATCTAGCTTTTGGAATTTTCTCGGTGGTTG
GATTAGGAGTTCAAGCATTTTTACACTTCCGAGAATGGAGAAGTCCTTGA
CTAATGCTTAACTGCGTTATATGGGCAGTATTACTGTTTATTGCTTCGTG
TATTGTTGGAGCGAAAGCTGATAAATGGAATGGTCATAGTTCCTTGTGTG
AAGTTTATGCTTGTAATCATCTCGGAGCTGCTTGTGTGTTATTATTTTTG
TCATGGTGCATCATGGCAGGCTGGAGAGGGGAAGTACATTGGACTGTGGA
AAATGATTTTGAAGGAGGAAGTGGATTTTATTTGGCTACAACACTTATTC
CATGGTTTATCCTTCTCGTAGTTTTTGTTCTCATGTTGTTCAATATCCAC
AAGAAGATTCCAATCAATTTTCCTGTAACGATGTCTGAAGCATACGATAC
AGGCCCCCCACCAGCAGCAGCCCAATCATCTGATGGAGGGATCAGGCTGA
ATCCTGGTTTCATTAGGACACCACCTGGTCTCTTACTGCTGATCAATCTA
GCTTTTGGAATTTTCTCGGTGGTTGGATTAGGAGTTCAAGCATTTTTACA
CTTCCGAGAATGGAGAAGTCCTTGACTAATGCTTAACTGCGTTATATGGG
CAGTATTACTGTTTATTGCTTCGTGTATTGTTGGAGCGAAAGCTGATAAA
TGGAATGGTCATAGTTCCTTGTGTGAAGTTTATGCTTGTAATCATCTCGG
AGCTGCTTGTGTGTTATTATTTTTGTCATGGTGCATCATGGCAGGCTGGA
GAGGGGAAGTACATTGGACTGTGGAAAATGATTTTGAAGGAGGAAGTGGA
TTTTATTTGGCTACAACACTTATTCCATGGTTTATCCTTCTCGTAGTTTT
TGTTCTCATGTTGTTCAATATCCACAAGAAGATTCCAATCAATTTTCCTG
TAACGATGTCTGAAGCATACGATACAGGCCCCCCACCAGCAGCAGCCCAA
TCATCTGATGGAGGGATCAGGCTGAATCCTGGTTTCATTAGGACACCACC
TGGTCTCTTACTGCTGATCAATCTAGCTTTTGGAATTTTCTCGGTGGTTG
GATTAGGAGTTCAAGCATTTTTACACTTCCGAGAATGGAGAAGTCCTTGA
CTAATGCTTAACTGCGTTATATGGGCAGTATTACTGTTTATTGCTTCGTG
TATTGTTGGAGCGAAAGCTGATAAATGGAATGGTCATAGTTCCTTGTGTG
AAGTTTATGCTTGTAATCATCTCGGAGCTGCTTGTGTGTTATTATTTTTG
TCATGGTGCATCATGGCAGGCTGGAGAGGGGAAGTACATTGGACTGTGGA
AAATGATTTTGAAGGAGGAAGTGGATTTTATTTGGCTACAACACTTATTC
CATGGTTTATCCTTCTCGTAGTTTTTGTTCTCATGTTGTTCAATATCCAC
AAGAAGATTCCAATCAATTTTCCTGTAACGATGTCTGAAGCATACGATAC
AGGCCCCCCACCAGCAGCAGCCCAATCATCTGATGGAGGGATCAGGCTGA
ATCCTGGTTTCATTAGGACACCACCTGGTCTCTTACTGCTGATCAATCTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13490MSTRG.13490Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13490.7.p2.exon8MSTRG.13490.7.p2.exon8Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13490.7.p2.exon7MSTRG.13490.7.p2.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13490.7.p2.exon6MSTRG.13490.7.p2.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13490.7.p2.exon5MSTRG.13490.7.p2.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13490.7.p2.exon4MSTRG.13490.7.p2.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13490.7.p2.exon3MSTRG.13490.7.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13490.7.p2.exon2MSTRG.13490.7.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13490.7.p2.exon1MSTRG.13490.7.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13490.7.p2MSTRG.13490.7.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107_pilongenomesc0000107_pilon:627972..635307 -