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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:627941..635307- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13490.5.p1 ID=MSTRG.13490.5.p1|Name=MSTRG.13490.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7367bp|location=Sequence derived from alignment at sc0000107_pilon:627941..635307- (Clytia hemisphaerica_ch_hm2_pilon)
CGTTTCTTTCCAATAGTGACAAATAAAATAAAGAAAAGAAATCAAAATGG
CACAAAATATGTTTTTATATTGGGGATCTGGTAGCACGCCATGTTGGAGG
GCTATGATTGTTTTGGAAGAAAAGCAGTTATCTGGTTATGGTCAAAAATT
GGTTTCCTTCTCAGCCAAAGAACATAAATCTGAAGAAATCATGAAAATCA
ATCCTAGAGGACAGGTATTTATCAATTACATTTAGTAGTGTAGACAAGGG
GGAGGGCGCAAAGTTTGTGTAGAAGAGCAGATTTTTATGACATGGTAATT
ATCTTTTTGGACCTACCCCGTTGGAGGTCCTATAAATATTAACCTGTGTT
CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
TTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTTCGTCTGTTACCAACTTTTCTCAGGATTGAATTAT
AGGAATCTTTTGATTTTTGGTACAAAGGTGCAAAATGTGACAGAGCCCGA
TTTTCGAAGAAAAAATTTTGGGGCAAATTTGGGCCAAAAAACGGCTAAAA
AACGGGTTTTTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTCTGAT
TTTTTGCATGAAAGTAGGGTACGTCATCATAGTTAAAAGATGGCTCAAGC
AGATTTTTGCAAAAAAAATTTGTTGGCTCAAAAAACGCATTTTCATCTAT
AAGAATCACTATTAATAAGCATACATCAATGTTCTTTTTCAAATTACTCA
ATTTTTTTATGAGATAGATGTTTTTTTTTGCTCATGAGGGCTTACTTTTG
AAGAATATGTGTGTTTAGACATGAAATTTTGGTTGCTTGGCGTGTTTTTA
TAGAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACATTATCGCAAT
TACTTAGGTAATCAACTTACTTTTCTCGAGATTGGCTCTTTCATGCTTTA
TGATTTTTGGCACAAAGATGCATAACTATAAACCCGTCGAATGTGACGGA
GCTTGATTTTCGAAAAAAAATGTTTTTGGGCAAATTTGGGCCAAATAACG
GCTAAACAACAGGTTTTTTGGAGTTTGTGAAAAATTGGATCATTGTTTCT
TTCTGATTTTTTGCATGAAAGTAGGTAAAAGATGGCTCAAGCAGGTTTTT
TGAAAAAAAGGATTTTTCATCCCAAAAAACGCATCTTTATCTATAAGAAT
CACTATTAATAAGCATACATCAATGTTCTTAGCCAAATTACTCAATTTTT
TGATGAGATAGATGTTTTTTTTGCTCACGAAGTCTTGAATATGAAAGAAT
ATTTCAAGAGCATGGCATGAAACTTTGGTTTCTAAACGTTTTTTTTATAA
GAAACAAACGGAAATTTTAATAGATCATCACTATTTGTGTTCTGAATGAT
TGTTTAATGGTCACGCTCACGTAGATATCAATTATAAATGTGTTAAATGC
ATAACCAGGTAGGTCCATAAAAGTATCACTTGTTATATTTTGAATAGATA
AATTACAGTGTCATGAAAATCTCCACAAATTTTGCGCTCCTCCTGTCTAC
GCTACTGACGTTATCGGATAAATCTTTGTGAGATTTAATTTCGCTAATCG
GGGTTTAGAATAAAATTAGAAGAATCTTCTGTTTTAGTTTTGAACTAAAA
TTCCTATATTTGATTTTTGACCTTTTGTAAAAACTAACTAATTTAAAAAA
TGAAGCTATACTTTACTATATTTTTGAAAAAACTTCTTTAACCAAGCAGA
ATTTTTGTTAATTTTATGTTATGTATCTCCATGTTTCAGGTGCCAACTTT
CAAACACGGTGATATTGTTTTGAATGAGTCGATGGGAATTTGCCATTATT
TGGAGGTACAACTAAAGAACAAATTTTACAAGCATTATTCTTAGATTTTG
TCCCAAGAAAAATTGCTCAACATTTACCACCCCTCACTATATTTGCCATA
CAAGGAAGATTTGTATCTTGAAAAATTGAAAAGATAAAGCTAATTTGAAG
AATTTCATTTTCTGATTTTGGCGTAAATTCATTACCCTTAAGTCTACCCC
TAATCTATTTTCCACCATGTGGAAATCATGTCAATTTTAATAGACAAGTA
CTTTGAGGGTGGTTTGTTTGTACATGGTAGAGTACACTCAAAGTTGATGG
ACTTTTATTAACTGATATAATCAAGAGTTAGTTGGATTTCAAACTCAGAA
CTTCATGATGCTTTCACGCCAATCTTGAGTTAAAATTATTGACTAATAAA
AAATTATTATAAATTCTGTGTAATTTTTAGAGTCAATTCAAGAATCAGGG
AACGAAATTGATACCGGATAATGCAGAGAAGCAGGCCCTTGTGTTACAAC
GAATGTATGAGGTGAGAAAGTTCTTTTTGATTTTTTGAATGTCTAAATCA
AAGTGGTTATTTGTACAATGCTTCGTGTGATGCATATTGAACGTTTTGTA
AAAATGAACATGGGCCCGTCGACAGAGCTCAATTAGATACATAGCGATAA
GTATGTTTTAGGCTCACATACTTCAAATGGCTCGCCGAGGCCCATTATAT
AAAAAAGCTCGTGAGATGCCTATTTCACTTATCGCTTAAACAAATCGGAT
TTTTTACAATTTTCCATCCTTCAGGTTGAAAATATCATTGACAAAGCAAA
CCGTAAAATCATGTATTACATATGGTATAATAAAGAAAGCTTGGATGAGA
ATCTACTCACTGAACGACGACAAGCTCTAGGTACAGAGCTGAAAATCTGG
GAAGAATTTCTGACAAACAAGAAGTACATCACAGGGGATGAGTTCACAAT
GGCTGATGCATTCTTTTTCCCACAAATCGCTATCTTGGTACGTGGAAGTC
TATCTTTTGAGAACCGACCCAATTTGAAACGTTACTATGAAGAGTTATCA
CAACGCCCTTCCATAATGGCTTCTTGGCCTCCACATTTTAAGGATACTCC
ACCTACGGAAATGTTCACCAAAATCTAAGAAGGTTTTTCCCTCTTTTTTC
TTAGGCTAGTTATTTTTTCTTTACTTAGGGTATATTTTTGGTTGTGATTT
TTAATTTTTTGTACTTTTTTTACTTTCGTTTTGTTATAAGAACTACCTTG
AAATTGAAACATTTTTTCATGACTTTGTACAGTAACTGTACAGTTTTCTT
CTTCATTTTCGCCTACCTAAACATTTTTCACTGAAGCTTCCTCTTACACG
TCATCGAGATTTAACACCAGAAGTCACAATGGTGTAAGATTAGGTAAATG
TAGTATGAGGAGATTATCTTTACATTTTGTTGTGGTTTACTACAGATTTA
TATTTCTTTATCTTTATTCAGTCTAACCATTACTAGATTTTCTCATTAAT
AAAGGACAAGCCAATCTTTTCGTGTTTTTAAATCTCATCATTCTCATTGA
TATTATAATTTCGTTAGCTTCTCTCTTGACTATTGTGTTTCTCTCTATAA
AATACGTAGCAAACACTTATAAACCTTATTTGAAAAAAATGGTTTGCTCC
TTGCATAAAGCTGTGTATGTTGTTCAAATTTATTTTATGTGTTAAAAAGT
TTCTTCTTATCTTTCCTTGAATGAAAACATATTTTCTTTGCTAAAATATT
AATGGAGAATCAAAGAGGAGAATGTTAGAATAGTGAGTAGGGAACCCTAA
CAGCCAGATATTAGGGTTGTTTGAAAGAGAAATCTTGAGAGTTTTCTGCT
CGTGCTGTTTGATTTTTCATGAAAGTTGTTTCCTTCTTTAGTAAAAGATT
CAGATTTGATTTATGTTCAAGAGTGGTGAAAGTTTGCATGGTGTAAATGA
AAGGGCTGGAGGCTAAATTTTCTAAGAGCTTCAGAGTGTTTTGTTGAATT
TTATCGGTCTTTTGGAAAAAAAGCCCATTCTTATGACTTGGGTTTCATTT
CTATTATATTGATGATTTTAACTTGGAAGGAAAAATTTATACACATCACA
CACGATTATTCTTCTTTACTAGCAAGAAAAACTTCATTCAGAAATTTGCT
GACGGTGTTAAAAATTTAATCGTAAGGTTTTGTATAACGTCTAAAGATTA
TTAGAGCTTTTGAAATTCCCTTTCATTCATATAATCATACGAGTTTTTTA
GAGGTTTTTTATAAGAAGAGACAAAAGAAAGGTGTAAAAAAATATTTTTC
GAATAGATACCTTACGATATTGCCCTGGTACTGCTTAATAGTAAATTTGA
AAATTATTAGAATTAACAACAATTTCAGAACGTTTCAAAAAAAATATGTG
TAATTTGATTTGGTGTTTCCCAATTTTCTTAGGATATAAAGTTGAAGAAT
AAGAATGTCTGAAGCATACGATACAGGCCCCCCACCAGCAGCAGCCCAAT
CATCTGATGGAGGGATCAGGCTGAATCCTGGTTTCATTAGGACACCACCT
GGTCTCTTACTGCTGATCAATCTAGTAAGTCAACATTTTTGGCTGGAACT
GATAATCAACGTTTTTAAAACCCAACAGAAATTTTGAGCTTTAATGACAA
TCAATAGAATTTGAAATCCCCACTTTATTTAAAACACTCTTATTATTCTA
TTTTCATTGGTACTTAGCCCCTTCAAGTGTTCTCTATAAATGGTCCCGAG
TCACTGAGACCATAGTCCGTATAAAAAACCCTGGTCTGGAAGCCTTTTGT
TTCTTTCCATTGTTTCTTACTTGAACTTGTGTCGAGAAATTAGTTTGTTT
TGCTCACTTTTTAAACATGTGATAAATCTTAAACCAATCACAAGAGGAGT
ACTTGGTAACGTGATCAAAAACTGAGCAAATCGATTTTTATCTTTGATAT
TAACAAAGGGAAAAGCTAACAAAAAGTTACAACAATAAGCTTTCAGACCA
GTGTTTTTTATAAGGACTATGCTGAGACAGGGATAAGGAATATTCAGGTT
CTGTAAGCCCGTTTCTGGTGCTGATAATTTTAAAGTTTTCCTGATCGCAC
AAACTCTTTCCTATGCCCTTAGTTCGCCTTTTTATTAATGCGACAGCGAA
GAGAGATTGTATCATACACTTAAGTAAAATCAAAATAGTGGTGCAAGTGG
CTCTTAGTACGAGATATCGTAAAATATGCTTACTCAGCAAAATTTATTGA
TTTGAAAACCCAAATATCTCATGATCTCGGGATCAGAACACAGTTAGCGT
TTTAAAAACAATCCCTTTATCTTTTTTTTTAAATACTGTTTGCAGGTTAT
TAGTCGTAAAAGTCCTAGATGGTTTGCACAAATTGATTTATATACTGTAA
TGATAAAATTTTAATAAACGGGGGGTCCTAGTTACAGAGATCAGGAAATT
TGAAAAATAGAGAATTCTTATAAGTTCCTGAGGAGAAGGGACTAAAAAGA
ATTACAAAATTTCAATTAATAACCCTTATGCCCATTATTACTTTAATTAA
ATTCATTTTCCCCAGGTGTTATTATTTTTGTCATGGTGCATCATGGCAGG
CTGGAGAGGGGAAGTACATTGGACTGTGGAAAATGATTTTGAAGGAGGAA
GTGGATTTTATTTGGCTACAACACTTATTCCATGGTTTATCCTTCTCGTA
GTTTTTGTTCTCATGTTGTTCAATATCCACAAGAAGATTCCAATCAATTT
TCCTGTAACGGTGAGTGTGTCGTACGTTTTTGCTTAGCAGACAAAGAGAC
AGAGAGAGAAAGCGTAGAGGCATCCGGCTACAATCAACATCGAGAATTTT
GCCTATTTCCTCGTTTTTCGAAATTTTAAGTTCGTGCGAGAAAGTTGCTT
TTGGGCTATCTGTTAAATACAATCAAATATTTCCATTTGGAAGGAGTTTA
TAGACTTCCAGGTTATAATCTGAGCCTTATTGGACCATCTTTGAACTTTT
GGATCCTCAGATCGTTGGATTGTTAAATCTCAGAGTTAAAACTCAACCCT
TCCAACCTTCCTAGAATTTTAAAGACTCGCGGTTTTTTTACACAAACAAT
CTCTAGAGACTCTAATGCTATGATTTTTCGAATCCTTTTATTTTCCTCCT
TTCTTTAGCTAATGCTTAACTGCGTTATATGGGCAGTATTACTGTTTATT
GCTTCGTGTATTGTTGGAGCGAAAGCTGATAAATGGAATGGTCATAGTTC
CTTGTGTGAAGTTTATGCTTGTAATCATCTCGGAGCTGCTTGTGTAAGTC
TGAACTGGATTTTAAATTTCATTACATCCACTACATCAATTCCCAGGGGG
TGGGGTACTTACAGTAAGCAAATGTAGGGTACGATATGTGTCGCCTAAGG
GTGCCTTTTTTAGAAGTCACAACCCTAGTAATCCCCTCCCCCCCCGGGGG
CATCCATCTATTTTAGACTCTAAGGGATCTTAGCTGTCCATTTTCTAACT
ATCTTTTATGTGGGGATTTTTCAATTGTTTAGCTCAAAGTATAGTAGAAA
GTTATATTGTCTTTCCCAATGCAATTCTAGGTAGAACGCAATGAAATAGT
GACATTTCTCTTTTTCACCGGGGCTGACCTATCTAACAATACAAATTCTA
TTTTAAATATTTCTGAAATTTTCCCAGGTTTATGATGTTTAGACCCCTAG
ACCACAATATCAAAATATCCCTGAAACAGGCTGAATAACGCTCATAGATT
TATAAAACTCAAAGGGCTAATTGTCGGGCTTTAAGCCATCGCAGGCAAAA
AAAAGTTAATATCGGCAAAAATATTGTTGCTATTGTTTTCGAAAACCCAC
GAAAGCTTCTTATTGGTCAACCGCTGAAATTCTATTGTAATGTCACGCGA
CTTAGGTAGAATTTCCTACCTAACCACGGCACACTTTTCAGCAAAAGTAC
GCCATCTAGTCCTTCGGGCATTATAAATCTATGGTTGGGCTTTTTGAGCA
AACATGTTAAATTATGAATAACTTTTTCTTTTACAGGCTTTTGGAATTTT
CTCGGTGGTTGGATTAGGAGTTCAAGCATTTTTACACTTCCGAGAATGGA
GAAGTCCTTGAGCATGAAAATCCAATACTAAAAATCAATCACCAGATTTT
ATGACAATACTATGAGTTCATATTTTGAGAACAAAAATTGAATGAGAAGA
AATAAAAAGAAGATGGTGTTTGAAATTTAAAGACATTTTATAATCAGTAA
CACAAAAATCTTTAGAAATGATTCAAATGGACATATTAGTCGTAGATTTT
GTAAATTTAGGGCACATTTTATTTAGGAAATCTTTTTGTTGTATTTATGC
AGTCGTTGTGTTCGTTCGAAAATTCACTTCAATCAATTAATATTGTATAT
TTAACAAATTATTGTTAGGGAAATTGTAAACATGCAAGACGAGGCTAATC
TTTCGTATTGACGAAGA Coding sequence (CDS) from alignment at sc0000107_pilon:627941..635307- >MSTRG.13490.5.p1 ID=MSTRG.13490.5.p1|Name=MSTRG.13490.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2790bp|location=Sequence derived from alignment at sc0000107_pilon:627941..635307- (Clytia hemisphaerica_ch_hm2_pilon)
GATATAAAGTTGAAGAATAAGAATGTCTGAGTTGAAAATATCATTGACAA
AGCAAACCGTAAAATCATGTATTACATATGGTATAATAAAGAAAGCTTGG
ATGAGAATCTACTCACTGAACGACGACAAGCTCTAGGTACAGAGCTGAAA
ATCTGGGAAGAATTTCTGACAAACAAGAAGTACATCACAGGGGATGAGTT
CACAATGGCTGATGCATTCTTTTTCCCACAAATCGCTATCTTGAGTCAAT
TCAAGAATCAGGGAACGAAATTGATACCGGATAATGCAGAGAAGCAGGCC
CTTGTGTTACAACGAATGTATGAGGTGCCAACTTTCAAACACGGTGATAT
TGTTTTGAATGAGTCGATGGGAATTTGCCATTATTTGGAGATGGCACAAA
ATATGTTTTTATATTGGGGATCTGGTAGCACGCCATGTTGGAGGGCTATG
ATTGTTTTGGAAGAAAAGCAGTTATCTGGTTATGGTCAAAAATTGGTTTC
CTTCTCAGCCAAAGAACATAAATCTGAAGAAATCATGAAAATCAATCCTA
GAGGACAGGATATAAAGTTGAAGAATAAGAATGTCTGAGTTGAAAATATC
ATTGACAAAGCAAACCGTAAAATCATGTATTACATATGGTATAATAAAGA
AAGCTTGGATGAGAATCTACTCACTGAACGACGACAAGCTCTAGGTACAG
AGCTGAAAATCTGGGAAGAATTTCTGACAAACAAGAAGTACATCACAGGG
GATGAGTTCACAATGGCTGATGCATTCTTTTTCCCACAAATCGCTATCTT
GAGTCAATTCAAGAATCAGGGAACGAAATTGATACCGGATAATGCAGAGA
AGCAGGCCCTTGTGTTACAACGAATGTATGAGGTGCCAACTTTCAAACAC
GGTGATATTGTTTTGAATGAGTCGATGGGAATTTGCCATTATTTGGAGAT
GGCACAAAATATGTTTTTATATTGGGGATCTGGTAGCACGCCATGTTGGA
GGGCTATGATTGTTTTGGAAGAAAAGCAGTTATCTGGTTATGGTCAAAAA
TTGGTTTCCTTCTCAGCCAAAGAACATAAATCTGAAGAAATCATGAAAAT
CAATCCTAGAGGACAGGATATAAAGTTGAAGAATAAGAATGTCTGAGTTG
AAAATATCATTGACAAAGCAAACCGTAAAATCATGTATTACATATGGTAT
AATAAAGAAAGCTTGGATGAGAATCTACTCACTGAACGACGACAAGCTCT
AGGTACAGAGCTGAAAATCTGGGAAGAATTTCTGACAAACAAGAAGTACA
TCACAGGGGATGAGTTCACAATGGCTGATGCATTCTTTTTCCCACAAATC
GCTATCTTGAGTCAATTCAAGAATCAGGGAACGAAATTGATACCGGATAA
TGCAGAGAAGCAGGCCCTTGTGTTACAACGAATGTATGAGGTGCCAACTT
TCAAACACGGTGATATTGTTTTGAATGAGTCGATGGGAATTTGCCATTAT
TTGGAGATGGCACAAAATATGTTTTTATATTGGGGATCTGGTAGCACGCC
ATGTTGGAGGGCTATGATTGTTTTGGAAGAAAAGCAGTTATCTGGTTATG
GTCAAAAATTGGTTTCCTTCTCAGCCAAAGAACATAAATCTGAAGAAATC
ATGAAAATCAATCCTAGAGGACAGGATATAAAGTTGAAGAATAAGAATGT
CTGAGTTGAAAATATCATTGACAAAGCAAACCGTAAAATCATGTATTACA
TATGGTATAATAAAGAAAGCTTGGATGAGAATCTACTCACTGAACGACGA
CAAGCTCTAGGTACAGAGCTGAAAATCTGGGAAGAATTTCTGACAAACAA
GAAGTACATCACAGGGGATGAGTTCACAATGGCTGATGCATTCTTTTTCC
CACAAATCGCTATCTTGAGTCAATTCAAGAATCAGGGAACGAAATTGATA
CCGGATAATGCAGAGAAGCAGGCCCTTGTGTTACAACGAATGTATGAGGT
GCCAACTTTCAAACACGGTGATATTGTTTTGAATGAGTCGATGGGAATTT
GCCATTATTTGGAGATGGCACAAAATATGTTTTTATATTGGGGATCTGGT
AGCACGCCATGTTGGAGGGCTATGATTGTTTTGGAAGAAAAGCAGTTATC
TGGTTATGGTCAAAAATTGGTTTCCTTCTCAGCCAAAGAACATAAATCTG
AAGAAATCATGAAAATCAATCCTAGAGGACAGGATATAAAGTTGAAGAAT
AAGAATGTCTGAGTTGAAAATATCATTGACAAAGCAAACCGTAAAATCAT
GTATTACATATGGTATAATAAAGAAAGCTTGGATGAGAATCTACTCACTG
AACGACGACAAGCTCTAGGTACAGAGCTGAAAATCTGGGAAGAATTTCTG
ACAAACAAGAAGTACATCACAGGGGATGAGTTCACAATGGCTGATGCATT
CTTTTTCCCACAAATCGCTATCTTGAGTCAATTCAAGAATCAGGGAACGA
AATTGATACCGGATAATGCAGAGAAGCAGGCCCTTGTGTTACAACGAATG
TATGAGGTGCCAACTTTCAAACACGGTGATATTGTTTTGAATGAGTCGAT
GGGAATTTGCCATTATTTGGAGATGGCACAAAATATGTTTTTATATTGGG
GATCTGGTAGCACGCCATGTTGGAGGGCTATGATTGTTTTGGAAGAAAAG
CAGTTATCTGGTTATGGTCAAAAATTGGTTTCCTTCTCAGCCAAAGAACA
TAAATCTGAAGAAATCATGAAAATCAATCCTAGAGGACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:627941..635307 - |
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