|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:627840..632014- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13490.4.p1 ID=MSTRG.13490.4.p1|Name=MSTRG.13490.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4175bp|location=Sequence derived from alignment at sc0000107_pilon:627840..632014- (Clytia hemisphaerica_ch_hm2_pilon)
GTAAATGTAGTATGAGGAGATTATCTTTACATTTTGTTGTGGTTTACTAC
AGATTTATATTTCTTTATCTTTATTCAGTCTAACCATTACTAGATTTTCT
CATTAATAAAGGACAAGCCAATCTTTTCGTGTTTTTAAATCTCATCATTC
TCATTGATATTATAATTTCGTTAGCTTCTCTCTTGACTATTGTGTTTCTC
TCTATAAAATACGTAGCAAACACTTATAAACCTTATTTGAAAAAAATGGT
TTGCTCCTTGCATAAAGCTGTGTATGTTGTTCAAATTTATTTTATGTGTT
AAAAAGTTTCTTCTTATCTTTCCTTGAATGAAAACATATTTTCTTTGCTA
AAATATTAATGGAGAATCAAAGAGGAGAATGTTAGAATAGTGAGTAGGGA
ACCCTAACAGCCAGATATTAGGGTTGTTTGAAAGAGAAATCTTGAGAGTT
TTCTGCTCGTGCTGTTTGATTTTTCATGAAAGTTGTTTCCTTCTTTAGTA
AAAGATTCAGATTTGATTTATGTTCAAGAGTGGTGAAAGTTTGCATGGTG
TAAATGAAAGGGCTGGAGGCTAAATTTTCTAAGAGCTTCAGAGTGTTTTG
TTGAATTTTATCGGTCTTTTGGAAAAAAAGCCCATTCTTATGACTTGGGT
TTCATTTCTATTATATTGATGATTTTAACTTGGAAGGAAAAATTTATACA
CATCACACACGATTATTCTTCTTTACTAGCAAGAAAAACTTCATTCAGAA
ATTTGCTGACGGTGTTAAAAATTTAATCGTAAGGTTTTGTATAACGTCTA
AAGATTATTAGAGCTTTTGAAATTCCCTTTCATTCATATAATCATACGAG
TTTTTTAGAGGTTTTTTATAAGAAGAGACAAAAGAAAGGTGTAAAAAAAT
ATTTTTCGAATAGATACCTTACGATATTGCCCTGGTACTGCTTAATAGTA
AATTTGAAAATTATTAGAATTAACAACAATTTCAGAACGTTTCAAAAAAA
ATATGTGTAATTTGATTTGGTGTTTCCCAATTTTCTTAGGATATAAAGTT
GAAGAATAAGAATGTCTGAAGCATACGATACAGGCCCCCCACCAGCAGCA
GCCCAATCATCTGATGGAGGGATCAGGCTGAATCCTGGTTTCATTAGGAC
ACCACCTGGTCTCTTACTGCTGATCAATCTAGTAAGTCAACATTTTTGGC
TGGAACTGATAATCAACGTTTTTAAAACCCAACAGAAATTTTGAGCTTTA
ATGACAATCAATAGAATTTGAAATCCCCACTTTATTTAAAACACTCTTAT
TATTCTATTTTCATTGGTACTTAGCCCCTTCAAGTGTTCTCTATAAATGG
TCCCGAGTCACTGAGACCATAGTCCGTATAAAAAACCCTGGTCTGGAAGC
CTTTTGTTTCTTTCCATTGTTTCTTACTTGAACTTGTGTCGAGAAATTAG
TTTGTTTTGCTCACTTTTTAAACATGTGATAAATCTTAAACCAATCACAA
GAGGAGTACTTGGTAACGTGATCAAAAACTGAGCAAATCGATTTTTATCT
TTGATATTAACAAAGGGAAAAGCTAACAAAAAGTTACAACAATAAGCTTT
CAGACCAGTGTTTTTTATAAGGACTATGCTGAGACAGGGATAAGGAATAT
TCAGGTTCTGTAAGCCCGTTTCTGGTGCTGATAATTTTAAAGTTTTCCTG
ATCGCACAAACTCTTTCCTATGCCCTTAGTTCGCCTTTTTATTAATGCGA
CAGCGAAGAGAGATTGTATCATACACTTAAGTAAAATCAAAATAGTGGTG
CAAGTGGCTCTTAGTACGAGATATCGTAAAATATGCTTACTCAGCAAAAT
TTATTGATTTGAAAACCCAAATATCTCATGATCTCGGGATCAGAACACAG
TTAGCGTTTTAAAAACAATCCCTTTATCTTTTTTTTTAAATACTGTTTGC
AGGTTATTAGTCGTAAAAGTCCTAGATGGTTTGCACAAATTGATTTATAT
ACTGTAATGATAAAATTTTAATAAACGGGGGGTCCTAGTTACAGAGATCA
GGAAATTTGAAAAATAGAGAATTCTTATAAGTTCCTGAGGAGAAGGGACT
AAAAAGAATTACAAAATTTCAATTAATAACCCTTATGCCCATTATTACTT
TAATTAAATTCATTTTCCCCAGGTGTTATTATTTTTGTCATGGTGCATCA
TGGCAGGCTGGAGAGGGGAAGTACATTGGACTGTGGAAAATGATTTTGAA
GGAGGAAGTGGATTTTATTTGGCTACAACACTTATTCCATGGTTTATCCT
TCTCGTAGTTTTTGTTCTCATGTTGTTCAATATCCACAAGAAGATTCCAA
TCAATTTTCCTGTAACGGTGAGTGTGTCGTACGTTTTTGCTTAGCAGACA
AAGAGACAGAGAGAGAAAGCGTAGAGGCATCCGGCTACAATCAACATCGA
GAATTTTGCCTATTTCCTCGTTTTTCGAAATTTTAAGTTCGTGCGAGAAA
GTTGCTTTTGGGCTATCTGTTAAATACAATCAAATATTTCCATTTGGAAG
GAGTTTATAGACTTCCAGGTTATAATCTGAGCCTTATTGGACCATCTTTG
AACTTTTGGATCCTCAGATCGTTGGATTGTTAAATCTCAGAGTTAAAACT
CAACCCTTCCAACCTTCCTAGAATTTTAAAGACTCGCGGTTTTTTTACAC
AAACAATCTCTAGAGACTCTAATGCTATGATTTTTCGAATCCTTTTATTT
TCCTCCTTTCTTTAGCTAATGCTTAACTGCGTTATATGGGCAGTATTACT
GTTTATTGCTTCGTGTATTGTTGGAGCGAAAGCTGATAAATGGAATGGTC
ATAGTTCCTTGTGTGAAGTTTATGCTTGTAATCATCTCGGAGCTGCTTGT
GTAAGTCTGAACTGGATTTTAAATTTCATTACATCCACTACATCAATTCC
CAGGGGGTGGGGTACTTACAGTAAGCAAATGTAGGGTACGATATGTGTCG
CCTAAGGGTGCCTTTTTTAGAAGTCACAACCCTAGTAATCCCCTCCCCCC
CCGGGGGCATCCATCTATTTTAGACTCTAAGGGATCTTAGCTGTCCATTT
TCTAACTATCTTTTATGTGGGGATTTTTCAATTGTTTAGCTCAAAGTATA
GTAGAAAGTTATATTGTCTTTCCCAATGCAATTCTAGGTAGAACGCAATG
AAATAGTGACATTTCTCTTTTTCACCGGGGCTGACCTATCTAACAATACA
AATTCTATTTTAAATATTTCTGAAATTTTCCCAGGTTTATGATGTTTAGA
CCCCTAGACCACAATATCAAAATATCCCTGAAACAGGCTGAATAACGCTC
ATAGATTTATAAAACTCAAAGGGCTAATTGTCGGGCTTTAAGCCATCGCA
GGCAAAAAAAAGTTAATATCGGCAAAAATATTGTTGCTATTGTTTTCGAA
AACCCACGAAAGCTTCTTATTGGTCAACCGCTGAAATTCTATTGTAATGT
CACGCGACTTAGGTAGAATTTCCTACCTAACCACGGCACACTTTTCAGCA
AAAGTACGCCATCTAGTCCTTCGGGCATTATAAATCTATGGTTGGGCTTT
TTGAGCAAACATGTTAAATTATGAATAACTTTTTCTTTTACAGGCTTTTG
GAATTTTCTCGGTGGTTGGATTAGGAGTTCAAGCATTTTTACACTTCCGA
GAATGGAGAAGTCCTTGAGCATGAAAATCCAATACTAAAAATCAATCACC
AGATTTTATGACAATACTATGAGTTCATATTTTGAGAACAAAAATTGAAT
GAGAAGAAATAAAAAGAAGATGGTGTTTGAAATTTAAAGACATTTTATAA
TCAGTAACACAAAAATCTTTAGAAATGATTCAAATGGACATATTAGTCGT
AGATTTTGTAAATTTAGGGCACATTTTATTTAGGAAATCTTTTTGTTGTA
TTTATGCAGTCGTTGTGTTCGTTCGAAAATTCACTTCAATCAATTAATAT
TGTATATTTAACAAATTATTGTTAGGGAAATTGTAAACATGCAAGACGAG
GCTAATCTTTCGTATTGACGAAGAAAAATTATTTCTTTAATTGCCGGCTA
TTTTTCAAGGGCCCAATTTTTAAATTTTCAGTACCAGCGCAGGACGGGAT
GAAAGCTATAATATTTTGAACACCC Coding sequence (CDS) from alignment at sc0000107_pilon:627840..632014- >MSTRG.13490.4.p1 ID=MSTRG.13490.4.p1|Name=MSTRG.13490.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2100bp|location=Sequence derived from alignment at sc0000107_pilon:627840..632014- (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTTGGAATTTTCTCGGTGGTTGGATTAGGAGTTCAAGCATTTTTACA
CTTCCGAGAATGGAGAAGTCCTTGACTAATGCTTAACTGCGTTATATGGG
CAGTATTACTGTTTATTGCTTCGTGTATTGTTGGAGCGAAAGCTGATAAA
TGGAATGGTCATAGTTCCTTGTGTGAAGTTTATGCTTGTAATCATCTCGG
AGCTGCTTGTGTGTTATTATTTTTGTCATGGTGCATCATGGCAGGCTGGA
GAGGGGAAGTACATTGGACTGTGGAAAATGATTTTGAAGGAGGAAGTGGA
TTTTATTTGGCTACAACACTTATTCCATGGTTTATCCTTCTCGTAGTTTT
TGTTCTCATGTTGTTCAATATCCACAAGAAGATTCCAATCAATTTTCCTG
TAACGATGTCTGAAGCATACGATACAGGCCCCCCACCAGCAGCAGCCCAA
TCATCTGATGGAGGGATCAGGCTGAATCCTGGTTTCATTAGGACACCACC
TGGTCTCTTACTGCTGATCAATCTAGCTTTTGGAATTTTCTCGGTGGTTG
GATTAGGAGTTCAAGCATTTTTACACTTCCGAGAATGGAGAAGTCCTTGA
CTAATGCTTAACTGCGTTATATGGGCAGTATTACTGTTTATTGCTTCGTG
TATTGTTGGAGCGAAAGCTGATAAATGGAATGGTCATAGTTCCTTGTGTG
AAGTTTATGCTTGTAATCATCTCGGAGCTGCTTGTGTGTTATTATTTTTG
TCATGGTGCATCATGGCAGGCTGGAGAGGGGAAGTACATTGGACTGTGGA
AAATGATTTTGAAGGAGGAAGTGGATTTTATTTGGCTACAACACTTATTC
CATGGTTTATCCTTCTCGTAGTTTTTGTTCTCATGTTGTTCAATATCCAC
AAGAAGATTCCAATCAATTTTCCTGTAACGATGTCTGAAGCATACGATAC
AGGCCCCCCACCAGCAGCAGCCCAATCATCTGATGGAGGGATCAGGCTGA
ATCCTGGTTTCATTAGGACACCACCTGGTCTCTTACTGCTGATCAATCTA
GCTTTTGGAATTTTCTCGGTGGTTGGATTAGGAGTTCAAGCATTTTTACA
CTTCCGAGAATGGAGAAGTCCTTGACTAATGCTTAACTGCGTTATATGGG
CAGTATTACTGTTTATTGCTTCGTGTATTGTTGGAGCGAAAGCTGATAAA
TGGAATGGTCATAGTTCCTTGTGTGAAGTTTATGCTTGTAATCATCTCGG
AGCTGCTTGTGTGTTATTATTTTTGTCATGGTGCATCATGGCAGGCTGGA
GAGGGGAAGTACATTGGACTGTGGAAAATGATTTTGAAGGAGGAAGTGGA
TTTTATTTGGCTACAACACTTATTCCATGGTTTATCCTTCTCGTAGTTTT
TGTTCTCATGTTGTTCAATATCCACAAGAAGATTCCAATCAATTTTCCTG
TAACGATGTCTGAAGCATACGATACAGGCCCCCCACCAGCAGCAGCCCAA
TCATCTGATGGAGGGATCAGGCTGAATCCTGGTTTCATTAGGACACCACC
TGGTCTCTTACTGCTGATCAATCTAGCTTTTGGAATTTTCTCGGTGGTTG
GATTAGGAGTTCAAGCATTTTTACACTTCCGAGAATGGAGAAGTCCTTGA
CTAATGCTTAACTGCGTTATATGGGCAGTATTACTGTTTATTGCTTCGTG
TATTGTTGGAGCGAAAGCTGATAAATGGAATGGTCATAGTTCCTTGTGTG
AAGTTTATGCTTGTAATCATCTCGGAGCTGCTTGTGTGTTATTATTTTTG
TCATGGTGCATCATGGCAGGCTGGAGAGGGGAAGTACATTGGACTGTGGA
AAATGATTTTGAAGGAGGAAGTGGATTTTATTTGGCTACAACACTTATTC
CATGGTTTATCCTTCTCGTAGTTTTTGTTCTCATGTTGTTCAATATCCAC
AAGAAGATTCCAATCAATTTTCCTGTAACGATGTCTGAAGCATACGATAC
AGGCCCCCCACCAGCAGCAGCCCAATCATCTGATGGAGGGATCAGGCTGA
ATCCTGGTTTCATTAGGACACCACCTGGTCTCTTACTGCTGATCAATCTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:627840..632014 - |
|
