MSTRG.13489.1.p1 (mRNA) -

Overview
NameMSTRG.13489.1.p1
Unique NameMSTRG.13489.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000107_pilon:615416..616520+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13489.1.p1 ID=MSTRG.13489.1.p1|Name=MSTRG.13489.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1105bp|location=Sequence derived from alignment at sc0000107_pilon:615416..616520+ (Clytia hemisphaerica_ch_hm2_pilon)
acgaTCAATCAATATTTAAATTGTGATAAGAATGATATCTTTGATATGGC
TgtttattttcagtttattgACAGGCTTTTCGGCACAAGAAAGAGACGTT
TTACTTGTTGAAAAGGAAACCAACCCTCGAAAGTCAGTATCTGCTGCTAC
CGTTCAACAAAGACCTATCAAATATTTCAAGGAAACAGCCTTTTGGCCTA
CACTAACGTTCTGCAGACCAGATGAATGGGTGTACTGTAAAAAATACAAC
CTCTTGGAAATAGATTCTGTCATAAAAAGtgagtatccaaattgttttat
tgttttctacCTGGTGGGGTGTACTCCCGTGACGGCGGCTATGGCGGCGG
GGGGCGCACTTAGGCAAACTTGGGTAccgggacgtgccgctggtcagtgt
ttCtttttCAGGCTCTGAAGATCTGACAGGGTTCCAAATTTACTAATTTC
TAAAATATGTATCAGCCAGGGTCaacttttggtaatttttgaaaatttgt
ggagtggaaattagaaatttttcgtctacttttagtcattttggccACTT
TTCACggtgaaaatggGaaaAtttatctacTtatcagggaaaaaaatgtc
ggagtttatTTAgccggggaaaaatttcgtcacctggaggcattttcgtc
acttttccccgaccaaaatttcaaatttgtcacttttcccctacgcaatt
tacaatttagtcactttcaacCAGTTAAATTGttcaaatgaaatggtttc
cttcactagctcgaaaaaagatcttgtaataattcgacgtttaaagtaCT
AATTTCCGTTTTTGtacagaaaattaaaaatcactAATTTCGTTTATTAT
AGGAAAAACAGCACACCGATTcctcaaaattcaactaaaagaTACTAAAA
GCGTAATAAACCAATCCACACCAAGAACAATATCTGTGAGTTTGAGGCGA
GAGAACTCTGAAGAAGACTGGCTTAACGTTGACGTTTGTGGTGATTTAAT
TTGTATTCAAAAAGAGTAAAAAGAGTTACGACTAAAAGGTACTGGAATTC
CTTTCAATGTCATTATCTAAACACTGATTTGCGTCACCGACGTCTAAGTC
CAGTT

Coding sequence (CDS) from alignment at sc0000107_pilon:615416..616520+

>MSTRG.13489.1.p1 ID=MSTRG.13489.1.p1|Name=MSTRG.13489.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=828bp|location=Sequence derived from alignment at sc0000107_pilon:615416..616520+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATATCTTTGATATGGCTgtttattttcagtttattgACAGGCTTTTC
GGCACAAGAAAGAGACGTTTTACTTGTTGAAAAGGAAACCAACCCTCGAA
AGTCAGTATCTGCTGCTACCGTTCAACAAAGACCTATCAAATATTTCAAG
GAAACAGCCTTTTGGCCTACACTAACGTTCTGCAGACCAGATGAATGGGT
GTACTGTAAAAAATACAACCTCTTGGAAATAGATTCTGTCATAAAAAGAA
AAACAGCACACCGATTcctcaaaattcaactaaaagaTACTAAAAGCGTA
ATAAACCAATCCACACCAAGAACAATATCTGTGAGTTTGAGGCGAGAGAA
CTCTGAAGAAGACTGGCTTAACGTTGACGTTTGTGGTGATTTAATTTGTA
TTCAAAAAGAGTAAATGATATCTTTGATATGGCTgtttattttcagttta
ttgACAGGCTTTTCGGCACAAGAAAGAGACGTTTTACTTGTTGAAAAGGA
AACCAACCCTCGAAAGTCAGTATCTGCTGCTACCGTTCAACAAAGACCTA
TCAAATATTTCAAGGAAACAGCCTTTTGGCCTACACTAACGTTCTGCAGA
CCAGATGAATGGGTGTACTGTAAAAAATACAACCTCTTGGAAATAGATTC
TGTCATAAAAAGAAAAACAGCACACCGATTcctcaaaattcaactaaaag
aTACTAAAAGCGTAATAAACCAATCCACACCAAGAACAATATCTGTGAGT
TTGAGGCGAGAGAACTCTGAAGAAGACTGGCTTAACGTTGACGTTTGTGG
TGATTTAATTTGTATTCAAAAAGAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13489MSTRG.13489Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13489.1.p1.exon1MSTRG.13489.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13489.1.p1.exon2MSTRG.13489.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13489.1.p1MSTRG.13489.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107_pilongenomesc0000107_pilon:615416..616520 +