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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:608198..610360- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13488.1.p1 ID=MSTRG.13488.1.p1|Name=MSTRG.13488.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2163bp|location=Sequence derived from alignment at sc0000107_pilon:608198..610360- (Clytia hemisphaerica_ch_hm2_pilon)
AAATTTACTTATTAAAATCTTCTAAATTTGTTGTTTTGGATATGCATTTT
AGATGAAAAATGACAAATGGGGTTTGATTTTGCGATGCAATATTTGATAT
TCTTCTTCACTTTCCTTGGTAATATGCCTTCCTCTGCACAACAAAGCTGT
TACATGAACTGCAATTGCTCAGGTACAGAGATCTCATGTGACGGTGCACC
AAAAGACATTCTCAATGGAACCCCTCCCAAAAGCAACATTACGAAACTGA
TTCTGATCAACATGGAGTTAGAAAATGATGTGTCATTGATGAAATTCCTG
GAGAACCTAACGCAGCTTCAATATATAGATTTATCATTAAATCAACTGAC
AGAAATACCGAAGCTGGATAACTTGGCCACGTTAAACAATTTAGTTTTAC
GTCATAACAAAATCGAAAACTTACCAAAAGAATTAGCTGATATCGAATTC
AAAAATTTAACAATCGACTTGTCAGAAAATCCAATAAACTGTAACTGTAC
AACGGTGTACATAGTAGAAAAGACACAAGAAATAAAATACAAAGGGATAT
GTACACAACAAAACATTAAAATAAATGAGCTGAATCACACCATGGTTGAT
TGTGACCCTTGTTCAATAAATAATGGAGGTTGTTCGTTAATCAAGACTTG
CATTGCTGAAAATGCTCTGAATGTAGTATGTATCTGTAATAATGGTTTTA
CTGGAGATTTCTGTCAGATATCTCCCACCAACCCTGTACCATGCAAAATA
AACAATTGTTTAAATGGCGGTGTTTGCTTTCACGTTGAAAACACAAACTC
TACATTCTGCGAGTGTGTTTCCACTGACTATAGTGGTGACTTCTGCCAAA
ACAAAACAAGGAATGAAACCACTAGAAAAACCACCTTAAGCTTGAACGCT
ATTACTGCGATTATTGTCTCCTTATTGGTTTTATTGTTTGTGATAGTTTT
CGGTTATTGGTATTGTGTACATTTGCGTCCGAAACGTAGAAGAATGCGAG
AGAGCCGAAAAAAGAAAGCAAAGAATAGTTTCGATAGTCAAAACAGCATC
GTCAATTACTATCTTCAGGTAGGAATCATTGATGTACTTAGAAATCGATT
AGTCATGCATTGTAGAATCACCGTACAATTACTAAAGTTTCTTATTGCCA
GAAAAGCATTATTGGCCTTTCCCGGGATCATTCCGCTTTTTTTCGTCTCC
TACGTTAGGTCTCTACGTATGATAGCTGTATCCCGAGGTATTTGATTTTT
AAGAAAAATATTTTTTGCTGCGTCAGCATATTTTACGATATTCTAGCTGA
ATCAGCAAAACCTCAAATCCAAGTAATTCATTATCTAAGTTGTCATCGAA
ACCCTGTAAACCATACCATTTCAGTAAATTTTAAGGGCAATATTAGCTTG
GTTTGAATGTTATATCCTTTTTATTCCTCATTAATTTAGCATAATTAATT
AAACTTCTGATTATAGAACGAGGGTTACTTTCATGATGAGTCAACTAGCA
TACCAAATTCACCCAAAGAGGTAAAGTAAAAAGTATGACTTACTTGGGGT
TTGATCTTCAGTTTCTATCCATCACCTGCAATAAAGCAATTCTTAAAATG
TGGATGTTAATTCCAGAGACAGTTTCTGGCTTTTGTTTGGGCTTGATTGT
TTCTTTCTCATACATCATTGATATTGTATTTTTTTAATCGTCTAAAATAT
AAGATCAGAACTAATCAACAACGGCTATAATTTCTATTCTCGAAGCCTTT
AAAACCTCTTAATATTCTAGAGCGAAGAGAATTCGTACCCACACGACCCT
GCACATAACCGTTGGTTGCATGGACGAAGAAGATGTTCTACAATTTTGGA
AGAAAAAGCAAGTCGTGAGGGCAGTTGTATGGATGAAAATGAAAAGAAAT
AAAATAGTTTTTCTTTATACTGAAATTTGCAAAATTTGTGAAGCCTTATT
TTCAACATAGAAATATCCTTAAAATCTTCTTAATCTTTTACCGTAATATA
TGTCCTAAATTGCATGTTTTGGAGTTATCAAAGCCTACAAATGTTCTTAA
AAAGTTGTTAGCCATTAAGACCTATTCTTCTCATAAAGTTTGTTTTTGTT
CTTACAAAAATCTTGTGTATACTCTGTACATATACTAAGTCAGATATGAT
AATGGAATGCAAA Coding sequence (CDS) from alignment at sc0000107_pilon:608198..610360- >MSTRG.13488.1.p1 ID=MSTRG.13488.1.p1|Name=MSTRG.13488.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3564bp|location=Sequence derived from alignment at sc0000107_pilon:608198..610360- (Clytia hemisphaerica_ch_hm2_pilon)
AGCGAAGAGAATTCGTACCCACACGACCCTGCACATAACCGTTGGTTGCA
TGGACGAAGAAGATGTTCTACAATTTTGGAAGAAAAAGCAAGTCGTGAGG
GCAGTTGTATGGATGAAAATGAAAAGAAATAAAACGAGGGTTACTTTCAT
GATGAGTCAACTAGCATACCAAATTCACCCAAAGAGATGGGGTTTGATTT
TGCGATGCAATATTTGATATTCTTCTTCACTTTCCTTGGTAATATGCCTT
CCTCTGCACAACAAAGCTGTTACATGAACTGCAATTGCTCAGGTACAGAG
ATCTCATGTGACGGTGCACCAAAAGACATTCTCAATGGAACCCCTCCCAA
AAGCAACATTACGAAACTGATTCTGATCAACATGGAGTTAGAAAATGATG
TGTCATTGATGAAATTCCTGGAGAACCTAACGCAGCTTCAATATATAGAT
TTATCATTAAATCAACTGACAGAAATACCGAAGCTGGATAACTTGGCCAC
GTTAAACAATTTAGTTTTACGTCATAACAAAATCGAAAACTTACCAAAAG
AATTAGCTGATATCGAATTCAAAAATTTAACAATCGACTTGTCAGAAAAT
CCAATAAACTGTAACTGTACAACGGTGTACATAGTAGAAAAGACACAAGA
AATAAAATACAAAGGGATATGTACACAACAAAACATTAAAATAAATGAGC
TGAATCACACCATGGTTGATTGTGACCCTTGTTCAATAAATAATGGAGGT
TGTTCGTTAATCAAGACTTGCATTGCTGAAAATGCTCTGAATGTAGTATG
TATCTGTAATAATGGTTTTACTGGAGATTTCTGTCAGATATCTCCCACCA
ACCCTGTACCATGCAAAATAAACAATTGTTTAAATGGCGGTGTTTGCTTT
CACGTTGAAAACACAAACTCTACATTCTGCGAGTGTGTTTCCACTGACTA
TAGTGGTGACTTCTGCCAAAACAAAACAAGGAATGAAACCACTAGAAAAA
CCACCTTAAGCTTGAACGCTATTACTGCGATTATTGTCTCCTTATTGGTT
TTATTGTTTGTGATAGTTTTCGGTTATTGGTATTGTGTACATTTGCGTCC
GAAACGTAGAAGAATGCGAGAGAGCCGAAAAAAGAAAGCAAAGAATAGTT
TCGATAGTCAAAACAGCATCGTCAATTACTATCTTCAGAGCGAAGAGAAT
TCGTACCCACACGACCCTGCACATAACCGTTGGTTGCATGGACGAAGAAG
ATGTTCTACAATTTTGGAAGAAAAAGCAAGTCGTGAGGGCAGTTGTATGG
ATGAAAATGAAAAGAAATAAAACGAGGGTTACTTTCATGATGAGTCAACT
AGCATACCAAATTCACCCAAAGAGATGGGGTTTGATTTTGCGATGCAATA
TTTGATATTCTTCTTCACTTTCCTTGGTAATATGCCTTCCTCTGCACAAC
AAAGCTGTTACATGAACTGCAATTGCTCAGGTACAGAGATCTCATGTGAC
GGTGCACCAAAAGACATTCTCAATGGAACCCCTCCCAAAAGCAACATTAC
GAAACTGATTCTGATCAACATGGAGTTAGAAAATGATGTGTCATTGATGA
AATTCCTGGAGAACCTAACGCAGCTTCAATATATAGATTTATCATTAAAT
CAACTGACAGAAATACCGAAGCTGGATAACTTGGCCACGTTAAACAATTT
AGTTTTACGTCATAACAAAATCGAAAACTTACCAAAAGAATTAGCTGATA
TCGAATTCAAAAATTTAACAATCGACTTGTCAGAAAATCCAATAAACTGT
AACTGTACAACGGTGTACATAGTAGAAAAGACACAAGAAATAAAATACAA
AGGGATATGTACACAACAAAACATTAAAATAAATGAGCTGAATCACACCA
TGGTTGATTGTGACCCTTGTTCAATAAATAATGGAGGTTGTTCGTTAATC
AAGACTTGCATTGCTGAAAATGCTCTGAATGTAGTATGTATCTGTAATAA
TGGTTTTACTGGAGATTTCTGTCAGATATCTCCCACCAACCCTGTACCAT
GCAAAATAAACAATTGTTTAAATGGCGGTGTTTGCTTTCACGTTGAAAAC
ACAAACTCTACATTCTGCGAGTGTGTTTCCACTGACTATAGTGGTGACTT
CTGCCAAAACAAAACAAGGAATGAAACCACTAGAAAAACCACCTTAAGCT
TGAACGCTATTACTGCGATTATTGTCTCCTTATTGGTTTTATTGTTTGTG
ATAGTTTTCGGTTATTGGTATTGTGTACATTTGCGTCCGAAACGTAGAAG
AATGCGAGAGAGCCGAAAAAAGAAAGCAAAGAATAGTTTCGATAGTCAAA
ACAGCATCGTCAATTACTATCTTCAGAGCGAAGAGAATTCGTACCCACAC
GACCCTGCACATAACCGTTGGTTGCATGGACGAAGAAGATGTTCTACAAT
TTTGGAAGAAAAAGCAAGTCGTGAGGGCAGTTGTATGGATGAAAATGAAA
AGAAATAAAACGAGGGTTACTTTCATGATGAGTCAACTAGCATACCAAAT
TCACCCAAAGAGATGGGGTTTGATTTTGCGATGCAATATTTGATATTCTT
CTTCACTTTCCTTGGTAATATGCCTTCCTCTGCACAACAAAGCTGTTACA
TGAACTGCAATTGCTCAGGTACAGAGATCTCATGTGACGGTGCACCAAAA
GACATTCTCAATGGAACCCCTCCCAAAAGCAACATTACGAAACTGATTCT
GATCAACATGGAGTTAGAAAATGATGTGTCATTGATGAAATTCCTGGAGA
ACCTAACGCAGCTTCAATATATAGATTTATCATTAAATCAACTGACAGAA
ATACCGAAGCTGGATAACTTGGCCACGTTAAACAATTTAGTTTTACGTCA
TAACAAAATCGAAAACTTACCAAAAGAATTAGCTGATATCGAATTCAAAA
ATTTAACAATCGACTTGTCAGAAAATCCAATAAACTGTAACTGTACAACG
GTGTACATAGTAGAAAAGACACAAGAAATAAAATACAAAGGGATATGTAC
ACAACAAAACATTAAAATAAATGAGCTGAATCACACCATGGTTGATTGTG
ACCCTTGTTCAATAAATAATGGAGGTTGTTCGTTAATCAAGACTTGCATT
GCTGAAAATGCTCTGAATGTAGTATGTATCTGTAATAATGGTTTTACTGG
AGATTTCTGTCAGATATCTCCCACCAACCCTGTACCATGCAAAATAAACA
ATTGTTTAAATGGCGGTGTTTGCTTTCACGTTGAAAACACAAACTCTACA
TTCTGCGAGTGTGTTTCCACTGACTATAGTGGTGACTTCTGCCAAAACAA
AACAAGGAATGAAACCACTAGAAAAACCACCTTAAGCTTGAACGCTATTA
CTGCGATTATTGTCTCCTTATTGGTTTTATTGTTTGTGATAGTTTTCGGT
TATTGGTATTGTGTACATTTGCGTCCGAAACGTAGAAGAATGCGAGAGAG
CCGAAAAAAGAAAGCAAAGAATAGTTTCGATAGTCAAAACAGCATCGTCA
ATTACTATCTTCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:608198..610360 - |
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