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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:520862..523836- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13481.1.p1 ID=MSTRG.13481.1.p1|Name=MSTRG.13481.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2975bp|location=Sequence derived from alignment at sc0000107_pilon:520862..523836- (Clytia hemisphaerica_ch_hm2_pilon)
CTATTTTCATCATCAGTTGAGAAATTTGCTTTTTTGTTGAAGGTTCATTG
GAGCGTTTTATTGTTTGTTTTGAGTTTCAAATCGTATGGCTTTGCAGAGG
ATTTGAGGTTTTCTAAAAATATGGAGAACGCAGGAGCTTTGGACATGTCG
GCGAAACGGCTAGCCGGAGACGCCGTGCTTCAATCCGAAAGGGAAGAGGA
AGAAATCATTGACCGTTTGGCTGCCAAAGTAATAGGAGATTCGTTTAGAG
AAGGGCTCGATACGACGGCGAAAAGACTTTCTGAAGAAGAGGTTTTACAA
CAATCAGTGAGCGAAAAAGCTGAAATCGTTACTACGGCGAGACGGATATC
TGATTTAGTTTTAGAACAGTCAATCCGGGAAGTCGAAACGGAAATCGATA
TGGAGGCGAAACTTCTTGCTAGTAAGATACTGGCACACGTAATTAACGAC
GAAGTAGGACTTGCTGCTGCAAATAATATGATGGATGGTTACGCATCTAT
GTCAGACCCATACCATTCAGTGGATACTACGGCGAAACATCATACCTCAA
AAGAAGTTCAGTGTGTAAACAACAAGATTGTTATTGCGGCGAAAAAGACT
TCTCCAAGTCCAATAGATGTCGAAGGTTTGAACTGTGACGAAGAGCTTCT
AAATCTGACAGTGAAAACGATTATAGATAAAGTGCTGAAAAAAGTTGTCG
AGGAAGATATTCTCAATTCCATAAACAACACCAAGAAAAAAGGAGACGAT
AATGTCAATGCTGGTGACAGCGTTGTCCAACAGGATGAAGTGCCACTTAA
CCAAGAGACTCCAGTAGGAAAATCCAACATCACCAAAGAAAATGCCACCG
CACTACCACCAAAGCAAAGTCAGAATAGTGTTGACCAAGACCAAACCAAA
TCTGAGGAGTCAATACCACAGAACCGTGAAAGTTCAGAAGGGGAATCCAA
AAGTGATACAGAAAATGCCACCGTATCCTTAGGAGAGTGTTCCAACTCGA
AAGAAAGTGCCACCGCGACACCAAAACGTAGTTGGACGAAAGTAAACCCA
AGTCAAAACACAGAGGAAGGACTCGAGTATGTTGTTTATGATATTTTGAA
AGACGTCGATCGAAACGAAGGTTTCTATTGTGAAGACTCGACAAATGCGA
GAGAATTAGAACAACGTCGTGCCGCTAGACAATTGAAGAGGGCTTTAGAA
GTTGAAAGACTTGCACTGTCGAAATCACTCGAAACCCAGATGGCACGGAG
ACGGTCTGCCACTATGAAGGTACAACGGCAGGCCGAGGAATTTCAAAAGA
GAATGGAAGAGATACAAGAGATGGATGTTAACTTTGAGAACCATCCTGAA
CTGTACGCTGCTGAAGCGATCATAGATGAAGAATCGGATGATTCGGAGCC
CGAAATTGCCGAGACCGATGACGGTGGTGTTTACGCCGACGTCTTTCAGT
TGGTAGACATGACCCCGATTAGTACATTCGGGGCACTACCGGCACCCGAA
GAGGTCAACTTCACGGAATGGCAGACTCCGATTTCAATGTTCATCGATTG
CTACTTATACAAACGAGAAATATTGCGAGGAAGATTCCCTGTCAAGAGAA
TGAGGTACCGTTCACCTAGCTTTTTCTTCCCGCCAAAAGTAATTCTTGCT
AAGTCAATTAAATTTTTCTACACATTTCTTTTAAGTTACAGTATCCAAAA
TTTAACAAATATTTTCCTCCTTTTTTGTAAATACTGCAAAATAGTTACAG
TGGAGTCTCTTTAACTCGAACCTCGAGAAGTCTCCTTGGCTCGAACATGT
CTTATGGTCCCTAGTTAACAATTCCTTTTAAACCTTTCTCCGCAACTCGA
AATTTCCTTTGGCTTAACTCGAAGAGATTTGTGTCCCCCGTTCGAGTTAT
GGAGACTCGACTGTATAAATAAAAGGGTAATTCGCCAAAATTAATCATCA
TACATTTTCCTGATTCTTTTCAAAGCCATTGTATTCTTCTTAATAAGGTA
CATCAAACAAAAAGCCGCCGAGCGTAGAAAGAGGTCGAAAGAAGAACGAG
ACGCGAAAAAGAATAACGCGTTGTGTTTAGCGGATTTACGAGCCGAAGGA
GAGATTATCGAAGACCAATGCCAGATGATCGACAGGGAACGTAGAATACA
TTTGTATACGGTAAATATTTCTCCCTCATTTGTTCAGCTGAATGTGATGT
AGACAATTATCTTACCAAGTTTCTAAGAATGAGCACTTCAATGAAAGATG
GTTGTAATCTACAAGGATTCGAAGGCGTAATGTAGCATTTTGACATAAAC
TGAGCTTGTTTCGTAGGGAAGATTTCATTTCAAAAACGCTTGAAAAAACA
CTAAACATTCCTTCTTTCATCTTCAAAAAAAAATAAATAAGATCTCCAAA
GTACTTGATACAATTTTTACAGTTATTTAGCATTGTGCATTTGCCTGATA
AAAATAGGTTCCTTTTTTACTACTTAATACAAAAAATAAAACTACCCTCT
TTGTCTCATTCTGTTTTTAGGACAAACCAAAGATGGCTCAGAACATCCAA
TCGAACACGGGGCCAGTCATTAACGAGACTGCAAATGTCAAACGCCCCAG
CAGATGGAAGAGGGTAAAGCGTGCCATTAGGAATTGTCTAAAGCTTAGAG
GACACAGCCGAAGACGTGTGTCAGACGACGAAATTATTGATCGAAAATTG
AAGGAAGTTAAACGGCTTTTGGATGGCCTTTCGGAATGAGTACATGGGTG
GAGATGCCGTGAAAAATCTAATTTTTTTAAATATCTCTATTTTAAAATTT
TTGGGAGCTAGATAGTTTTTATATAACATGAGGTGCTATTTGACGTGTCA
ACTCCATCGGGCAACATAGAAGGGCGTTAGGATGGAGTTTGTTAACTGTA
AGGTGTTCAATTTCGACAGTTAAAAAGTGTTCATAATGTAAATCCGAATC
CACTCTCTACCCAAGGTTGCAAAGT Coding sequence (CDS) from alignment at sc0000107_pilon:520862..523836- >MSTRG.13481.1.p1 ID=MSTRG.13481.1.p1|Name=MSTRG.13481.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5598bp|location=Sequence derived from alignment at sc0000107_pilon:520862..523836- (Clytia hemisphaerica_ch_hm2_pilon)
GACAAACCAAAGATGGCTCAGAACATCCAATCGAACACGGGGCCAGTCAT
TAACGAGACTGCAAATGTCAAACGCCCCAGCAGATGGAAGAGGGTAAAGC
GTGCCATTAGGAATTGTCTAAAGCTTAGAGGACACAGCCGAAGACGTGTG
TCAGACGACGAAATTATTGATCGAAAATTGAAGGAAGTTAAACGGCTTTT
GGATGGCCTTTCGGAATGAGTACATCAAACAAAAAGCCGCCGAGCGTAGA
AAGAGGTCGAAAGAAGAACGAGACGCGAAAAAGAATAACGCGTTGTGTTT
AGCGGATTTACGAGCCGAAGGAGAGATTATCGAAGACCAATGCCAGATGA
TCGACAGGGAACGTAGAATACATTTGTATACGATGGAGAACGCAGGAGCT
TTGGACATGTCGGCGAAACGGCTAGCCGGAGACGCCGTGCTTCAATCCGA
AAGGGAAGAGGAAGAAATCATTGACCGTTTGGCTGCCAAAGTAATAGGAG
ATTCGTTTAGAGAAGGGCTCGATACGACGGCGAAAAGACTTTCTGAAGAA
GAGGTTTTACAACAATCAGTGAGCGAAAAAGCTGAAATCGTTACTACGGC
GAGACGGATATCTGATTTAGTTTTAGAACAGTCAATCCGGGAAGTCGAAA
CGGAAATCGATATGGAGGCGAAACTTCTTGCTAGTAAGATACTGGCACAC
GTAATTAACGACGAAGTAGGACTTGCTGCTGCAAATAATATGATGGATGG
TTACGCATCTATGTCAGACCCATACCATTCAGTGGATACTACGGCGAAAC
ATCATACCTCAAAAGAAGTTCAGTGTGTAAACAACAAGATTGTTATTGCG
GCGAAAAAGACTTCTCCAAGTCCAATAGATGTCGAAGGTTTGAACTGTGA
CGAAGAGCTTCTAAATCTGACAGTGAAAACGATTATAGATAAAGTGCTGA
AAAAAGTTGTCGAGGAAGATATTCTCAATTCCATAAACAACACCAAGAAA
AAAGGAGACGATAATGTCAATGCTGGTGACAGCGTTGTCCAACAGGATGA
AGTGCCACTTAACCAAGAGACTCCAGTAGGAAAATCCAACATCACCAAAG
AAAATGCCACCGCACTACCACCAAAGCAAAGTCAGAATAGTGTTGACCAA
GACCAAACCAAATCTGAGGAGTCAATACCACAGAACCGTGAAAGTTCAGA
AGGGGAATCCAAAAGTGATACAGAAAATGCCACCGTATCCTTAGGAGAGT
GTTCCAACTCGAAAGAAAGTGCCACCGCGACACCAAAACGTAGTTGGACG
AAAGTAAACCCAAGTCAAAACACAGAGGAAGGACTCGAGTATGTTGTTTA
TGATATTTTGAAAGACGTCGATCGAAACGAAGGTTTCTATTGTGAAGACT
CGACAAATGCGAGAGAATTAGAACAACGTCGTGCCGCTAGACAATTGAAG
AGGGCTTTAGAAGTTGAAAGACTTGCACTGTCGAAATCACTCGAAACCCA
GATGGCACGGAGACGGTCTGCCACTATGAAGGTACAACGGCAGGCCGAGG
AATTTCAAAAGAGAATGGAAGAGATACAAGAGATGGATGTTAACTTTGAG
AACCATCCTGAACTGTACGCTGCTGAAGCGATCATAGATGAAGAATCGGA
TGATTCGGAGCCCGAAATTGCCGAGACCGATGACGGTGGTGTTTACGCCG
ACGTCTTTCAGTTGGTAGACATGACCCCGATTAGTACATTCGGGGCACTA
CCGGCACCCGAAGAGGTCAACTTCACGGAATGGCAGACTCCGATTTCAAT
GTTCATCGATTGCTACTTATACAAACGAGAAATATTGCGAGGAAGATTCC
CTGTCAAGAGAATGAGGACAAACCAAAGATGGCTCAGAACATCCAATCGA
ACACGGGGCCAGTCATTAACGAGACTGCAAATGTCAAACGCCCCAGCAGA
TGGAAGAGGGTAAAGCGTGCCATTAGGAATTGTCTAAAGCTTAGAGGACA
CAGCCGAAGACGTGTGTCAGACGACGAAATTATTGATCGAAAATTGAAGG
AAGTTAAACGGCTTTTGGATGGCCTTTCGGAATGAGTACATCAAACAAAA
AGCCGCCGAGCGTAGAAAGAGGTCGAAAGAAGAACGAGACGCGAAAAAGA
ATAACGCGTTGTGTTTAGCGGATTTACGAGCCGAAGGAGAGATTATCGAA
GACCAATGCCAGATGATCGACAGGGAACGTAGAATACATTTGTATACGAT
GGAGAACGCAGGAGCTTTGGACATGTCGGCGAAACGGCTAGCCGGAGACG
CCGTGCTTCAATCCGAAAGGGAAGAGGAAGAAATCATTGACCGTTTGGCT
GCCAAAGTAATAGGAGATTCGTTTAGAGAAGGGCTCGATACGACGGCGAA
AAGACTTTCTGAAGAAGAGGTTTTACAACAATCAGTGAGCGAAAAAGCTG
AAATCGTTACTACGGCGAGACGGATATCTGATTTAGTTTTAGAACAGTCA
ATCCGGGAAGTCGAAACGGAAATCGATATGGAGGCGAAACTTCTTGCTAG
TAAGATACTGGCACACGTAATTAACGACGAAGTAGGACTTGCTGCTGCAA
ATAATATGATGGATGGTTACGCATCTATGTCAGACCCATACCATTCAGTG
GATACTACGGCGAAACATCATACCTCAAAAGAAGTTCAGTGTGTAAACAA
CAAGATTGTTATTGCGGCGAAAAAGACTTCTCCAAGTCCAATAGATGTCG
AAGGTTTGAACTGTGACGAAGAGCTTCTAAATCTGACAGTGAAAACGATT
ATAGATAAAGTGCTGAAAAAAGTTGTCGAGGAAGATATTCTCAATTCCAT
AAACAACACCAAGAAAAAAGGAGACGATAATGTCAATGCTGGTGACAGCG
TTGTCCAACAGGATGAAGTGCCACTTAACCAAGAGACTCCAGTAGGAAAA
TCCAACATCACCAAAGAAAATGCCACCGCACTACCACCAAAGCAAAGTCA
GAATAGTGTTGACCAAGACCAAACCAAATCTGAGGAGTCAATACCACAGA
ACCGTGAAAGTTCAGAAGGGGAATCCAAAAGTGATACAGAAAATGCCACC
GTATCCTTAGGAGAGTGTTCCAACTCGAAAGAAAGTGCCACCGCGACACC
AAAACGTAGTTGGACGAAAGTAAACCCAAGTCAAAACACAGAGGAAGGAC
TCGAGTATGTTGTTTATGATATTTTGAAAGACGTCGATCGAAACGAAGGT
TTCTATTGTGAAGACTCGACAAATGCGAGAGAATTAGAACAACGTCGTGC
CGCTAGACAATTGAAGAGGGCTTTAGAAGTTGAAAGACTTGCACTGTCGA
AATCACTCGAAACCCAGATGGCACGGAGACGGTCTGCCACTATGAAGGTA
CAACGGCAGGCCGAGGAATTTCAAAAGAGAATGGAAGAGATACAAGAGAT
GGATGTTAACTTTGAGAACCATCCTGAACTGTACGCTGCTGAAGCGATCA
TAGATGAAGAATCGGATGATTCGGAGCCCGAAATTGCCGAGACCGATGAC
GGTGGTGTTTACGCCGACGTCTTTCAGTTGGTAGACATGACCCCGATTAG
TACATTCGGGGCACTACCGGCACCCGAAGAGGTCAACTTCACGGAATGGC
AGACTCCGATTTCAATGTTCATCGATTGCTACTTATACAAACGAGAAATA
TTGCGAGGAAGATTCCCTGTCAAGAGAATGAGGACAAACCAAAGATGGCT
CAGAACATCCAATCGAACACGGGGCCAGTCATTAACGAGACTGCAAATGT
CAAACGCCCCAGCAGATGGAAGAGGGTAAAGCGTGCCATTAGGAATTGTC
TAAAGCTTAGAGGACACAGCCGAAGACGTGTGTCAGACGACGAAATTATT
GATCGAAAATTGAAGGAAGTTAAACGGCTTTTGGATGGCCTTTCGGAATG
AGTACATCAAACAAAAAGCCGCCGAGCGTAGAAAGAGGTCGAAAGAAGAA
CGAGACGCGAAAAAGAATAACGCGTTGTGTTTAGCGGATTTACGAGCCGA
AGGAGAGATTATCGAAGACCAATGCCAGATGATCGACAGGGAACGTAGAA
TACATTTGTATACGATGGAGAACGCAGGAGCTTTGGACATGTCGGCGAAA
CGGCTAGCCGGAGACGCCGTGCTTCAATCCGAAAGGGAAGAGGAAGAAAT
CATTGACCGTTTGGCTGCCAAAGTAATAGGAGATTCGTTTAGAGAAGGGC
TCGATACGACGGCGAAAAGACTTTCTGAAGAAGAGGTTTTACAACAATCA
GTGAGCGAAAAAGCTGAAATCGTTACTACGGCGAGACGGATATCTGATTT
AGTTTTAGAACAGTCAATCCGGGAAGTCGAAACGGAAATCGATATGGAGG
CGAAACTTCTTGCTAGTAAGATACTGGCACACGTAATTAACGACGAAGTA
GGACTTGCTGCTGCAAATAATATGATGGATGGTTACGCATCTATGTCAGA
CCCATACCATTCAGTGGATACTACGGCGAAACATCATACCTCAAAAGAAG
TTCAGTGTGTAAACAACAAGATTGTTATTGCGGCGAAAAAGACTTCTCCA
AGTCCAATAGATGTCGAAGGTTTGAACTGTGACGAAGAGCTTCTAAATCT
GACAGTGAAAACGATTATAGATAAAGTGCTGAAAAAAGTTGTCGAGGAAG
ATATTCTCAATTCCATAAACAACACCAAGAAAAAAGGAGACGATAATGTC
AATGCTGGTGACAGCGTTGTCCAACAGGATGAAGTGCCACTTAACCAAGA
GACTCCAGTAGGAAAATCCAACATCACCAAAGAAAATGCCACCGCACTAC
CACCAAAGCAAAGTCAGAATAGTGTTGACCAAGACCAAACCAAATCTGAG
GAGTCAATACCACAGAACCGTGAAAGTTCAGAAGGGGAATCCAAAAGTGA
TACAGAAAATGCCACCGTATCCTTAGGAGAGTGTTCCAACTCGAAAGAAA
GTGCCACCGCGACACCAAAACGTAGTTGGACGAAAGTAAACCCAAGTCAA
AACACAGAGGAAGGACTCGAGTATGTTGTTTATGATATTTTGAAAGACGT
CGATCGAAACGAAGGTTTCTATTGTGAAGACTCGACAAATGCGAGAGAAT
TAGAACAACGTCGTGCCGCTAGACAATTGAAGAGGGCTTTAGAAGTTGAA
AGACTTGCACTGTCGAAATCACTCGAAACCCAGATGGCACGGAGACGGTC
TGCCACTATGAAGGTACAACGGCAGGCCGAGGAATTTCAAAAGAGAATGG
AAGAGATACAAGAGATGGATGTTAACTTTGAGAACCATCCTGAACTGTAC
GCTGCTGAAGCGATCATAGATGAAGAATCGGATGATTCGGAGCCCGAAAT
TGCCGAGACCGATGACGGTGGTGTTTACGCCGACGTCTTTCAGTTGGTAG
ACATGACCCCGATTAGTACATTCGGGGCACTACCGGCACCCGAAGAGGTC
AACTTCACGGAATGGCAGACTCCGATTTCAATGTTCATCGATTGCTACTT
ATACAAACGAGAAATATTGCGAGGAAGATTCCCTGTCAAGAGAATGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:520862..523836 - |
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