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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:495736..497659+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13478.1.p1 ID=MSTRG.13478.1.p1|Name=MSTRG.13478.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1924bp|location=Sequence derived from alignment at sc0000107_pilon:495736..497659+ (Clytia hemisphaerica_ch_hm2_pilon)
tttcattttagctaacaaaaaaataaataaaaatggaatTTGATGACGAC
ATCGATTGTTTCCAAGACAACTTTGAAGAAGAGGAATGGAACGAATCTTT
GCTTGATGTCCCAAATACATGTCTCGATGTCAACATCACACCAAATCGTA
CAAAATGTCACGAACGTTGCATCATTCATATTGATattgattgtttttat
gctCAAGTTGAGATGATCAAAAATCCAGGACTGCGTGATAAACCGATAGG
CGTTAAGCAGAAAAATCTGGTAGTGACTACAAACTATGCCGCCCGTAATG
CGGGCGTTCCGAAAAGTTGCTGGATTCCGGAAGCAATGAGAGCCTGTCcg
gatttgattttgataaacgGTGAAGATTTACACGATTATCGACAATATTC
GCAAaagatttttgatgttttgaaatCATTCAAAGTTCCAGTTGAGAAAT
TGGGTATGGATGAGAACTATATGGATGTGACTAAGCTAGTTGAAAAAGAA
GTTGGAATCCAAGCTATGTTGCAGGGACATTACTTATTTAGTCCTGATGA
GAAAGTCTGCATTTGTGGTTGTGACGAAAGACTTAAAATAGCTTCAAACA
TAGCTCAAAAAGTTCGTTCAAAATTATACGAAGAACTATCGATTACGTCA
TCAGCTGGTATCGGTCATAACAAATTGTTAGCGAAAATGGTCGGTAGTCG
GCACAAACCGAACGATCAAACGACTATTTTTCCGTGCGATATCAACAAAT
TTTTAATGGAATTTGACGACGTTAAGAAACTGCCTGGTATTGGGTctgca
atggtttcaaaattgaaagaacATGAACTCAGTAAAATAAGTGCTGTTCA
ACAAACTTCAAAGCAACTACTTTGTGAGATTTTTGATTCCACAACTGCTA
ACAAAATATGGGATTTTTGTCACGGTGTTGATGACACTGAGGTTAAAATG
TCTCTACCATCCAAAAGTATTGGTGTTGAAGATCGTTTTAAAGGGATTAC
TAATCGAGACCAAAGTGTCAAACATATGGAATGGTTACTTGATCGTTTGT
CGTTACTTTTGCACGAAGATGGCCGACTACCGAGCGTTCTTCGTATAACA
GCACGTGACCATAACAAAGCGAAAGTTGTCAACAAGTTCATGAGAGAATC
ACGACAGACGAAAATCTCACCTGAACTTTTCCGCTCATTATCCAACGATA
AGACACTCGAAATTAAAGCGCGATCTAAAGTTCTTTCAATGGCTGTCGAT
CTACTTGGTAAAATGATACAATTGGATTCTAAATTTCATATGACTTTATT
GGGTATATCAGTAACTGGTTTTAATGAGATTACTAATAAAAACATTGTAT
CATTTTTCAAACAGCCTACAAGCACTTCTACTGGGTTACCTTTTTCCAAT
GGAGTTTCAAACCCTTCGAAAAAGCGTTCAACACCTGAATCCACACTAAA
CCAACCTGCTTCCAAACAAGCACGCGTTTCGGACGGAAAGTGTACGTCGA
ATAATGCTGTTGagagcaaaacaaacttttttcgtAAGTCGAACAAAACG
AAAAACGATAGAGAGAACACATCAAATTCGTCCCGTAACCTGCAACCTGA
AATTCCATTCGGTTGGGATAAAGACGTTTTTAAGGAGCTTCCATCTGATA
TTCAACAAGAACTCTTAGCTTCGAATCAAGTTCGACCATTGTCTAATAAG
AAAGTGCTAtcaccaaaaaaagaaaaaccgaaaaagaaaaataatttata
caattattttggtaaaaattaactagtttttagaatttttatcagatttt
gtttacatttccaTCTTTCTTTCCTTGTTGTgttcattgaaaaataattt
tgccaacATCAAGTTggtttttaatcatttttttccaagtggtttattac
agttttattaaataaaaagtattt Coding sequence (CDS) from alignment at sc0000107_pilon:495736..497659+ >MSTRG.13478.1.p1 ID=MSTRG.13478.1.p1|Name=MSTRG.13478.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1740bp|location=Sequence derived from alignment at sc0000107_pilon:495736..497659+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaatTTGATGACGACATCGATTGTTTCCAAGACAACTTTGAAGAAGA
GGAATGGAACGAATCTTTGCTTGATGTCCCAAATACATGTCTCGATGTCA
ACATCACACCAAATCGTACAAAATGTCACGAACGTTGCATCATTCATATT
GATattgattgtttttatgctCAAGTTGAGATGATCAAAAATCCAGGACT
GCGTGATAAACCGATAGGCGTTAAGCAGAAAAATCTGGTAGTGACTACAA
ACTATGCCGCCCGTAATGCGGGCGTTCCGAAAAGTTGCTGGATTCCGGAA
GCAATGAGAGCCTGTCcggatttgattttgataaacgGTGAAGATTTACA
CGATTATCGACAATATTCGCAAaagatttttgatgttttgaaatCATTCA
AAGTTCCAGTTGAGAAATTGGGTATGGATGAGAACTATATGGATGTGACT
AAGCTAGTTGAAAAAGAAGTTGGAATCCAAGCTATGTTGCAGGGACATTA
CTTATTTAGTCCTGATGAGAAAGTCTGCATTTGTGGTTGTGACGAAAGAC
TTAAAATAGCTTCAAACATAGCTCAAAAAGTTCGTTCAAAATTATACGAA
GAACTATCGATTACGTCATCAGCTGGTATCGGTCATAACAAATTGTTAGC
GAAAATGGTCGGTAGTCGGCACAAACCGAACGATCAAACGACTATTTTTC
CGTGCGATATCAACAAATTTTTAATGGAATTTGACGACGTTAAGAAACTG
CCTGGTATTGGGTctgcaatggtttcaaaattgaaagaacATGAACTCAG
TAAAATAAGTGCTGTTCAACAAACTTCAAAGCAACTACTTTGTGAGATTT
TTGATTCCACAACTGCTAACAAAATATGGGATTTTTGTCACGGTGTTGAT
GACACTGAGGTTAAAATGTCTCTACCATCCAAAAGTATTGGTGTTGAAGA
TCGTTTTAAAGGGATTACTAATCGAGACCAAAGTGTCAAACATATGGAAT
GGTTACTTGATCGTTTGTCGTTACTTTTGCACGAAGATGGCCGACTACCG
AGCGTTCTTCGTATAACAGCACGTGACCATAACAAAGCGAAAGTTGTCAA
CAAGTTCATGAGAGAATCACGACAGACGAAAATCTCACCTGAACTTTTCC
GCTCATTATCCAACGATAAGACACTCGAAATTAAAGCGCGATCTAAAGTT
CTTTCAATGGCTGTCGATCTACTTGGTAAAATGATACAATTGGATTCTAA
ATTTCATATGACTTTATTGGGTATATCAGTAACTGGTTTTAATGAGATTA
CTAATAAAAACATTGTATCATTTTTCAAACAGCCTACAAGCACTTCTACT
GGGTTACCTTTTTCCAATGGAGTTTCAAACCCTTCGAAAAAGCGTTCAAC
ACCTGAATCCACACTAAACCAACCTGCTTCCAAACAAGCACGCGTTTCGG
ACGGAAAGTGTACGTCGAATAATGCTGTTGagagcaaaacaaactttttt
cgtAAGTCGAACAAAACGAAAAACGATAGAGAGAACACATCAAATTCGTC
CCGTAACCTGCAACCTGAAATTCCATTCGGTTGGGATAAAGACGTTTTTA
AGGAGCTTCCATCTGATATTCAACAAGAACTCTTAGCTTCGAATCAAGTT
CGACCATTGTCTAATAAGAAAGTGCTAtcaccaaaaaaagaaaaaccgaa
aaagaaaaataatttatacaattattttggtaaaaattaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:495736..497659 + |
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