|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:384861..389869+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13469.1.p2 ID=MSTRG.13469.1.p2|Name=MSTRG.13469.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5009bp|location=Sequence derived from alignment at sc0000107_pilon:384861..389869+ (Clytia hemisphaerica_ch_hm2_pilon)
CATGTTTCACttcctttcaaagaaaattctgaACCTTTGGGAGATAATTA
CAGAACCGCTAAAAAACGTTTACAACACCTGCATGAACAGTTTTCGAAAG
ATAAACAACTTTTTGCAGATTATGAGCAAATTATAAATGAACAAAGAAAC
TTGAAAGTTATTGAAGAATGTGAGAAATATTCTATTGGCACCTCCCATTA
TTTAAGTCATCGTGGGGTTATAAGAACTGATAAACAAACAACACCCCTTC
GTATTGTTTTCGACGCTAGTTGCAAAAGTCGAGTGGGCGGACCCTCTTTA
AATGATGTTTTGTATACTGGTCCAACAATAACCGCTCCTCTGTTGGACGT
TTTGATTAAATTGAGAGCACATAATTTCGTTATTTCCGGTGATCTTGAAA
AAGCATTTTGGCAAATCACATTGTTTGAAGAAGATAAAAACTTTGTGAGA
TTTCTTTGGTTCAAAGACACCGAAAATTTTGACTTCgaaaaatttgagaa
caatGAACTTATTGAATTACGATTTACACGTGTTATTTTTGGTTTGAATT
CCTCGCCCTTTTTATTGCAAGCGACACTTCAAAAACACATCGAAACCCAT
TGTGAGGAtgatttgaaagaaactttgaaaGGAGCTCTTCATGTTGATGA
TCTCAATAGTGGTgcaaaaacaatcaaacaagcTGAATCTCTTTACGTCA
CCGCGAAGGAGTGTCTTGAGAAGGGAGGAtttaatttaagaaaatttcgt
tCAAACAGTGATGAGCTTGagagaaagatttttgaacGTTTCCCTGACGA
CAAACGATATAACGGGGAAGAGAAAATTTTAGGGATTAAATGGGATAAAA
ATTCCGACAAGATTATTTTAACTTTGCTGAAATGAGATCAAAGTTTACAC
AAAATGCAACTCGAAGGTCGCTTTTAGCTTCGATTGCTTCTATTTATGAT
CCCTTGGGACTGATAAGCCCAATCACAGTCAAAATGAGAATTTTGCATCA
GAAAGTTTGTAATGCAAAATGTAAGTGGGATGAACTGTTACCCCCTGACC
TCATGAAAGAGTGGAAGTCCGTTTTGAATGAATTTAAGGAGATAGACTTC
ATTGAAATTGATCGAAATTATTGCTTCGACGACCCCAACGACCCTATTAC
GAATGTACAGATCCACAGCTTCAGTGACGCCTCCGAAAATATGATTGCTG
CTACAATTTATGGCCGGTTTAAGCTTAAATCCGGGGAGGTCAAAACTGCT
ATTATTTTAAGTCGACACCGCATCATATCTTCTCAAgtgaaaaagtcgaa
aaagaATAGCGTCCCTCGAGGTGAATTAAACGGGTTATTGCTTCTGTCAG
AATTAAGCCCTATTGTGgagaataatttgaaaaaggtgTACGACGTTCAA
AAAACTATTTATTGGGTCGATTCTACATCTGCTTATTCGTGGGCTCAAAA
CGAAAGTGTAGATTATGACAAATATATACAAGAACGGGTTGAAAGTATTA
GAAACAGTATTGATATTGACAGTTTGAAATTGGTGCCATCTAAACTTAAT
CCAGCAGATATAGGGACTCGCGGTTATAGCCCCTCAACTTTGATTAACTC
TGAACTTTGGTTTCACGGCCCAGATTTTCTTAAGCTGAATGAAGAATACT
GGCCTAATCTCAGGTGTGGTGACAAGTTTTCTGATTATAAGCCCGGGAGC
TGTCCTCCTGACGGGCCACCTGATGATTTATTTGCTGATTTAAAGCCCGA
GGCTGAGACTAACTCTACCTGTCTCAGTTCTCCTAGGCACCCTGTTACTG
AAAAGTTATTAGTTAcacaaattcaagaaaaagaagatttaGTTTCAACG
AGTACCATGGGTGCTTTAATCCAAACAGAGAGGTTCTCCTCTCTGTCCAA
GTTGGTCCGCGTGACCGCTTGGGTCCTTAGatatataaggaaactaagaa
caaaagcaagaaacaagaaacaaaaagtaaataatacaaataaaacaaaa
atcaatGGTATCAATGGTGGTATCAATGGCATCAATGGTGGTATCACTGG
AGAAGAAATGTTGGAAGCCAAGCTGTTATGGTTGAAGGATGCACAAAGCT
CCTTACAAAGCAAAAAGAACTTTACAAATTTACAGAGACAGTTGAATTTA
TTTGTTGATGATAATGGCTTGTTTCGTTGTAGAGGGAGAATAGACAATGC
TGAACTCCCGTATGATTCAAAGTATCCAATTTTACTGTCAAAAACGAAAT
TTACCGAACTCGTCGTCTTGAAATCACACAAAGACGTTATGCACCGAGGG
GTAAAAGAAACCCTCAATCACATCAGACAAGAGTATTGGATAACGCAGCC
GAGAAACTTTATTAAACGAATTTTGAGTAAATGTCCTACTTGTAGATATT
ATGAAGGACAGAATTACGATTACCCAGAGGCAGGTCCGCTGCCAAAAGAA
CGAGTATCTTACGATAACGCATTTTCACACGTTGGAATAGATTACGCCGG
TCCAGTACATGTAACAAACATTTACGATTCAGATGGCTCGACTTACAAAG
CATGGATAGCGATCATCACTTGTGCCAGCTCCAGAGCAGTTTATTTGGAC
TTAGCTACTGACTGCTCTGGTCCAGCGTGCGTAAACATACTCAAACGTTA
CACGAACATTTTTGGATGTCCGAAAACTGTTATTTCAGACAATGGTACGA
ACTTCATTTCGTCAGACGTACAAGACTTCATGACAAGTAAAGGTGTtatt
tggaaattcaatattgaGAGTTCACCGTGGACAGGTGGATTTTTTGAAAG
AGTCGTAAAGATGGTCAAACGATGCTTACGAAAAGTGTTACGTAAAGCGA
TATTGAACTTTAACGACGTAGTTACTCTATTGAAAGAGATACAATGTATA
TTGAACAATCGACCCTTAACTTACCTTTATTCGGACGAGGTTAATGAAAT
TCTAACACCCAACAAACTGTTGTACGGTAGAAACATTGTGAATGAAGTGC
AATTACCAGATTCAGAAACCGAAAATCTCGAACCTTCCGAACAGTTATCA
CGGGTTCGAGAACTTGTTGatcatttttggactttatgGCAAAACGAATA
CCTTCTTGAACTACGAGAACATCAAAGACGTAAAAAGTCGAACAGTAGTT
TACACGCAAACAAAGGCGATGTAGTATTGATTAAAGATGAACGATTGAAA
CGTAGTCAATGGAGACTCGGTCGAGTTAAGAAACTTATTCGCAgtaaaga
ctttaaaattcgtGCTGCAGAAGTAAACGTTATTACCAACGGTCGTAAAC
TACAAACTTTGAAAAGACCGGTAAGTAAACTCTATCCGGTAGAATTTGAA
GAACAAAGAGACCAAAAGGACAAAagccaaattaaattcacaAGTGACGA
AGACACAATCACTTTCCTTTGTTTTGGGGGAGTGTGAAGAACAAAGATGA
GTTATATAACTATAAGTAGTCACGGGTCACGTGATTAGCACGTGACCCgc
tcttttattttttacagtCCTCTTTTGTATTTATATTTTAGTTGCTCGGA
AAGACTCATCGGAGACGGTCATAAAGACCTATACTATCTCAAATTATTAG
TCTGAACATTCAGTCATGTGAACGACGATAGATATTCACCACCCAAATAC
ATATGACACTTTCTGACCGTTTTCTTTTATAATCGATTTATTCTGTATAT
TCTATATTCGATACATTCTAACTGATTTTATCtttagtgaaaaaaaaaca
aacacaaatgaacaataatttgaaaaagatgacaaaagagaataaaaaca
cgcaaacaaaaaGTTTCATTTGCTTCACGTGTCGACAAACGGGCCATAAG
AAAGCCGAATGTCCTTTGAAATCCAATAATACTTGGTCAGCGGTTTCTGG
GCCAACACCTAAAGCACAGAACCATGGTAATATTAGAAGTAAAGCACCAG
ATTTTACATTTAAGGTTGAAAATGAACTGGAAATTGATATTGGGAATCGA
TGTTATGATGGGTATCTGAGAGATGACTTGTCTTTAGTCGATTTGTTGAA
AAACAGTCATGATAAGTTCTGTCAAAATAACGTAGACTCTGGTGAAATTC
CAATGTCAGATCGAGGTTACGATGGTTTGATCCACGATGATCCATCTCTG
GACAAGGATTTACTGACGTACAATAACAATTTTTATGGTCATGAGAAATA
CTATAAAATGAATGCTATTGGAATCATTAACTCTGGAGAAATCCTAAGTC
AGAATATGTCAGAACGAAGTTATGATGGTTCTATCCAAGATGATCTATCA
CTGGCAAAAGGTTTGGTAATGAATAATAATAATGACTTTCAACGAAACTA
TGATGGTTTAATCCAAGATGACCCATCTTTGGCAAACGAAATCTTAAGCA
GTAACAACAAATATGAACCTATTCAAAACATGTTCGTTGATCATGGTGGT
ATTAAAGTTGAAGAAGGTTCAAGAGAGGTGTTACAAGGTGAAGTTAATGT
AAAGAAGGAACAAAACTTAGGTCAAACACTGATGCAGTCATGGTATTGAA
AGAATGGTAGTGCTTTTTGTCGTGTTTTGTCGGTTATTacaaattaacat
tttcaagacCGATGAcacggatatatccgacatggGGTGTTAAGGGGCGA
GGCCCTTCTGTAAAGCCCGTTTTGGAGTTGAGATTTTTTGGTCATCATTT
ATACGAAGAGTATTTTGGTTCGTATTTAGTGAACGAGCGAGTCAAAAGCC
GCAAAATTTGGATCGttttttttAGATTCTCTCATCTAGTGAATTAATTT
GAAGTCCCTtctagttctggagatataacGGTTTAAAATTGGACCTTAGG
CATGGTATGAAcccccccAGAgattaggggggacctaattttttttttac
catattctgGCTGGGGGctggcaaaatttaattttttagggggtacctat
attgttggggggacctacaACTGCATGTGAAAGATCTGGGGGCTGGCTTT
GTTTAAAAT Coding sequence (CDS) from alignment at sc0000107_pilon:384861..389869+ >MSTRG.13469.1.p2 ID=MSTRG.13469.1.p2|Name=MSTRG.13469.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=885bp|location=Sequence derived from alignment at sc0000107_pilon:384861..389869+ (Clytia hemisphaerica_ch_hm2_pilon)
CATGTTTCACttcctttcaaagaaaattctgaACCTTTGGGAGATAATTA
CAGAACCGCTAAAAAACGTTTACAACACCTGCATGAACAGTTTTCGAAAG
ATAAACAACTTTTTGCAGATTATGAGCAAATTATAAATGAACAAAGAAAC
TTGAAAGTTATTGAAGAATGTGAGAAATATTCTATTGGCACCTCCCATTA
TTTAAGTCATCGTGGGGTTATAAGAACTGATAAACAAACAACACCCCTTC
GTATTGTTTTCGACGCTAGTTGCAAAAGTCGAGTGGGCGGACCCTCTTTA
AATGATGTTTTGTATACTGGTCCAACAATAACCGCTCCTCTGTTGGACGT
TTTGATTAAATTGAGAGCACATAATTTCGTTATTTCCGGTGATCTTGAAA
AAGCATTTTGGCAAATCACATTGTTTGAAGAAGATAAAAACTTTGTGAGA
TTTCTTTGGTTCAAAGACACCGAAAATTTTGACTTCgaaaaatttgagaa
caatGAACTTATTGAATTACGATTTACACGTGTTATTTTTGGTTTGAATT
CCTCGCCCTTTTTATTGCAAGCGACACTTCAAAAACACATCGAAACCCAT
TGTGAGGAtgatttgaaagaaactttgaaaGGAGCTCTTCATGTTGATGA
TCTCAATAGTGGTgcaaaaacaatcaaacaagcTGAATCTCTTTACGTCA
CCGCGAAGGAGTGTCTTGAGAAGGGAGGAtttaatttaagaaaatttcgt
tCAAACAGTGATGAGCTTGagagaaagatttttgaacGTTTCCCTGACGA
CAAACGATATAACGGGGAAGAGAAAATTTTAGGGATTAAATGGGATAAAA
ATTCCGACAAGATTATTTTAACTTTGCTGAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:384861..389869 + |
|
