MSTRG.13467.1.p1 (mRNA) -

Overview
NameMSTRG.13467.1.p1
Unique NameMSTRG.13467.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000107_pilon:366457..368157-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.13467.1.p1 ID=MSTRG.13467.1.p1|Name=MSTRG.13467.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1701bp|location=Sequence derived from alignment at sc0000107_pilon:366457..368157- (Clytia hemisphaerica_ch_hm2_pilon)
CCAGGATAAAGACAGAGGGACCCAGAGAGGACTAATTATCTTTTCATTAT AACATTGTCTCTCTAAGAGGAAAAAGAATTCGGCCACTCTTTGTTGTTTG TAGGTCTGAGATGAGAAAACATTTTATTTTTTCATACTATATATATGCTG CTCTGCCACCCAAATCTCCTGAAAGAAATTCTTTGAATTTCTTCACATAT ATTATGTATTTGATAAAAAAAATTCGTTTTCCATGGAACTGGGCTAAAAT AAAAGTTACACCGCATCACTTTTATAATACAGGTCATAATATGAATTTAT TTTCGAATCCAAAGCAAAAAACTAAACATAAATCCGAGTTTCATGCACTT TGTACAATCGTCAGATGTCTTCTGATGTTATCGGGCGATTGGACAAAGTG CATGAAACTCGGATTTATGTTTTATTTTTTTGGATTTGAAAATAATTCAT ATTGAAAAAAGCTCTGTGTGTTCACCATTTATTATTAATACAGGTTACAT TAATAATAACAATTCAACCAAAGAAATAATGCCCAAGTCCGGAAAGTACA AGCTTGGTGGCCCTGTGGTAAGTACATTGTTTCAAAAATCTAAGGTGTTA TAACTGTCATAATTTGGGCTTATTTCAAAAATCTTCTTCTTGCAAATAAA CTGTATAAGCCTGTAAGCCCTTTATATTAGAATGTTTTGTTTTAACTTCA ATTTCGTTCGTTTTTACAGATTGATCGTAGCAAACAAAGTGGAACCTGCC GTGTCAAAGATTGTAAATATTATCACAAGTTTCTCAAAAATTTGAAAGGG CATATCGAGCGTACGCACAGTTTGACGTTGGCAGAACATAAAAAATTGCC TCCGTCATTGCTGGGTATTGCCATAAAACAAAACGAGGGTAAAGATTATA TGAGGTACAGGGTAGCAGAACCGTGCCAAATTGAGGGCTGTAAAAAATTT ATGAAGCCTTTTAATGATCTTACCCGACACTTAAGAATTTCGCACGATCT TACTAGAAAAGAGTATAATGAAAAAAGGTATTTTTGGGTTTTACTAACTT CTACTACTTTTCAGTTCTAAAATTCAGCGTTTTCAAGTATTACAATTTCG AAAGAATTAAAATGATTATAATGTATGCAAAACTTTTAGCTCTACTCTAT TCGTACTAAGGGAGGGGGTGTTCATGATGTGGGACTGATAGCTACTGAAA TAAAAATGCTATGCCAAGAATATTTTGTGTCTTTTCCTAACGAATAAGGT TAAATCAATTTATCTTTTTTTAGAAAACTTTCCATGGCCAAGGACGTTAT TATTAACGAAAATATGAATGCTTCAATAACAGGTGATTTTCAATAATTTA GCTATGTGAATTTAAATTTAAAGAATCTCGCTATTGCAACAATGAGTTTC TTTAAAATAAAATTCTTGTCGTTTGACTGGAAAAATAGTTTTAAACTAGT TCATTTGTATTGTAATTATACACTCCTTCTACTATGGTTTTATAGGTATG CCAAGTGAAACGAACAATCAGGACTTGACAGCGGTTGACTCGGAAAACCA AAGTGATCCGGATTCGGACAAAGAAAGTCTAGATTCAGACGAACGGAGTG TGTTGGATTCAGATGTCCCTCCTTCTTCACCATTCAACCCGGAAGAATAT ATATTTTTTAGGTGATTTGATTCGATCAATAATATCTTGAAAAGAAAAAA A

Coding sequence (CDS) from alignment at sc0000107_pilon:366457..368157-

>MSTRG.13467.1.p1 ID=MSTRG.13467.1.p1|Name=MSTRG.13467.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2304bp|location=Sequence derived from alignment at sc0000107_pilon:366457..368157- (Clytia hemisphaerica_ch_hm2_pilon)
GTATGCCAAGTGAAACGAACAATCAGGACTTGACAGCGGTTGACTCGGAA
AACCAAAGTGATCCGGATTCGGACAAAGAAAGTCTAGATTCAGACGAACG
GAGTGTGTTGGATTCAGATGTCCCTCCTTCTTCACCATTCAACCCGGAAG
AATATATATTTTTTAGGTGAAAAACTTTCCATGGCCAAGGACGTTATTAT
TAACGAAAATATGAATGCTTCAATAACAGATTGATCGTAGCAAACAAAGT
GGAACCTGCCGTGTCAAAGATTGTAAATATTATCACAAGTTTCTCAAAAA
TTTGAAAGGGCATATCGAGCGTACGCACAGTTTGACGTTGGCAGAACATA
AAAAATTGCCTCCGTCATTGCTGGGTATTGCCATAAAACAAAACGAGGGT
AAAGATTATATGAGGTACAGGGTAGCAGAACCGTGCCAAATTGAGGGCTG
TAAAAAATTTATGAAGCCTTTTAATGATCTTACCCGACACTTAAGAATTT
CGCACGATCTTACTAGAAAAGAGTATAATGAAAAAAGATGCCCAAGTCCG
GAAAGTACAAGCTTGGTGGCCCTGTGGTATGCCAAGTGAAACGAACAATC
AGGACTTGACAGCGGTTGACTCGGAAAACCAAAGTGATCCGGATTCGGAC
AAAGAAAGTCTAGATTCAGACGAACGGAGTGTGTTGGATTCAGATGTCCC
TCCTTCTTCACCATTCAACCCGGAAGAATATATATTTTTTAGGTGAAAAA
CTTTCCATGGCCAAGGACGTTATTATTAACGAAAATATGAATGCTTCAAT
AACAGATTGATCGTAGCAAACAAAGTGGAACCTGCCGTGTCAAAGATTGT
AAATATTATCACAAGTTTCTCAAAAATTTGAAAGGGCATATCGAGCGTAC
GCACAGTTTGACGTTGGCAGAACATAAAAAATTGCCTCCGTCATTGCTGG
GTATTGCCATAAAACAAAACGAGGGTAAAGATTATATGAGGTACAGGGTA
GCAGAACCGTGCCAAATTGAGGGCTGTAAAAAATTTATGAAGCCTTTTAA
TGATCTTACCCGACACTTAAGAATTTCGCACGATCTTACTAGAAAAGAGT
ATAATGAAAAAAGATGCCCAAGTCCGGAAAGTACAAGCTTGGTGGCCCTG
TGGTATGCCAAGTGAAACGAACAATCAGGACTTGACAGCGGTTGACTCGG
AAAACCAAAGTGATCCGGATTCGGACAAAGAAAGTCTAGATTCAGACGAA
CGGAGTGTGTTGGATTCAGATGTCCCTCCTTCTTCACCATTCAACCCGGA
AGAATATATATTTTTTAGGTGAAAAACTTTCCATGGCCAAGGACGTTATT
ATTAACGAAAATATGAATGCTTCAATAACAGATTGATCGTAGCAAACAAA
GTGGAACCTGCCGTGTCAAAGATTGTAAATATTATCACAAGTTTCTCAAA
AATTTGAAAGGGCATATCGAGCGTACGCACAGTTTGACGTTGGCAGAACA
TAAAAAATTGCCTCCGTCATTGCTGGGTATTGCCATAAAACAAAACGAGG
GTAAAGATTATATGAGGTACAGGGTAGCAGAACCGTGCCAAATTGAGGGC
TGTAAAAAATTTATGAAGCCTTTTAATGATCTTACCCGACACTTAAGAAT
TTCGCACGATCTTACTAGAAAAGAGTATAATGAAAAAAGATGCCCAAGTC
CGGAAAGTACAAGCTTGGTGGCCCTGTGGTATGCCAAGTGAAACGAACAA
TCAGGACTTGACAGCGGTTGACTCGGAAAACCAAAGTGATCCGGATTCGG
ACAAAGAAAGTCTAGATTCAGACGAACGGAGTGTGTTGGATTCAGATGTC
CCTCCTTCTTCACCATTCAACCCGGAAGAATATATATTTTTTAGGTGAAA
AACTTTCCATGGCCAAGGACGTTATTATTAACGAAAATATGAATGCTTCA
ATAACAGATTGATCGTAGCAAACAAAGTGGAACCTGCCGTGTCAAAGATT
GTAAATATTATCACAAGTTTCTCAAAAATTTGAAAGGGCATATCGAGCGT
ACGCACAGTTTGACGTTGGCAGAACATAAAAAATTGCCTCCGTCATTGCT
GGGTATTGCCATAAAACAAAACGAGGGTAAAGATTATATGAGGTACAGGG
TAGCAGAACCGTGCCAAATTGAGGGCTGTAAAAAATTTATGAAGCCTTTT
AATGATCTTACCCGACACTTAAGAATTTCGCACGATCTTACTAGAAAAGA
GTATAATGAAAAAAGATGCCCAAGTCCGGAAAGTACAAGCTTGGTGGCCC
TGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.13467MSTRG.13467Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13467.1.p1MSTRG.13467.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.13467.1.p1.exon4MSTRG.13467.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13467.1.p1.exon3MSTRG.13467.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13467.1.p1.exon2MSTRG.13467.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.13467.1.p1.exon1MSTRG.13467.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107_pilongenomesc0000107_pilon:366457..368157 -