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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:42095..46097+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13451.1.p1 ID=MSTRG.13451.1.p1|Name=MSTRG.13451.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4003bp|location=Sequence derived from alignment at sc0000107_pilon:42095..46097+ (Clytia hemisphaerica_ch_hm2_pilon)
ccaggctcagccaaattttaggtgttctaaaaaaaaaaaaaacgtgtatt
actaaagaagaagaaaaatccaagaagaaaaatagtttggtttgtttgtt
ggcaaagaaagagaTATAAAGAAGAAGTATGGGTAGTCAAGGTAAAATGT
TTATACTTATTTAacgaacacccctgtctcaatgaccCGGTGAttttttt
AGTGGGGTCGAATGTTAGATTTGATACCAATGCAATGGGGACATAAGATT
GCTTGTTATAACATCTCTCTGTTTTAACGCTATAACGTCAATGGATTTCA
AATCATGCAGTTTAACATAGCTCGTAAATTAAGTGAGGGTTTTAAGAATT
accgaaaaaaatattacaagagGGATGAATACAGCTGATTCTCCATAATC
TCCATAATCTAATGCTTATTTTAACTTATCATTATCAAGTCAATAAAATA
TACAACAAACAGCCGGCCGGGCACTCAAGATAAGCGACGTTCGAAAGTGC
TCTTCATCAAGGGTTGAAATGAgagataagaaaaataaaaattttttggc
aaactttgggaaaatctgacaatttttagcttaaaataaataatACAAGA
AATCGCACCTTTTTCGCTTAAACTTACTCAAgttttgttaaactttttca
gCACTTTAAACAAATCACACATGCGCTAAATTTTCAGATCGCGTGAGGGA
GCAAACATTGCCTTAGCAATATTCGTAGAATTTTAAATGCAAAGTAATCA
CCTCTGTAACGTTAATTGGAAATAATTAAAGGCGTTTTCTTTGTACAGTA
AACTCTCACTTACccggctggcacacaacgttgttttaatgtccaaataa
cgttatttggacgttgtgaatgtcacatggacgttgttttgacgttgtgt
gccgtctgggaaTTCAAACTTCTATCATTTAAATCTTTCTATTATTCCCA
GTCCTTGTCAAGGAgaaaaccctcttaaaatactttctacaattcgaatc
tctctgtaaatTGATGAAATAAGATTCCCCGCCCGAGTTCGAGTTAACAC
AAGTCACCTGTATTTTGTACATTCTGCTACAATGTGTCCGGAAATCGACA
GAGaatttatcaataaaaatccataataattttgttactttttatgatgt
atTTGAACAAAGCAAAGTAGGAACTGGAATTTTCTCAGAGGCCCGGGCAA
AAAGGGTTACGgagatgtgccgctggtcagtgTACCATTTTCACCTCCAT
GAGTCcaaggtagggtcgcaaaaacgacaaaatagaaaaaagtagCCCGT
CGTAGGCTgcctttttggggaaaatttagaaaatagaGTTAAACTTAAGA
Aaactttggaatttcagtcccattcaggttcggaaattttggaaaaattt
tcccaaaaaacgagtcccacgtggGTTAGCATTTTTTGGACCCCCTGGGA
ATTCTATTGAATaaagaagtatttttttctatgaaattgagaatttttac
TTTATGCAAGATCTTTTCCCTCAGAACCCCGTCGGCCCACACCTAACCAT
TCCCTAAAAAACATTATCTTCTTCTTTTAGcaccaccatacaaccctgca
tcagcaccacagtacccacccacctcacaaccctacccaccaaccTCTCA
GCCTCAATATGCACCAACCTCTCAACCCTACTACCCACCCACTTCTCAAC
CGCAGTACCCACCTACCTCTCAACCAGGATATGGGTACCCACAAAACCAG
CAACCACCACCCAGTGGAAAATACCCCGAGCCTCCACCAGGGTATACTGC
TCAACAACCCATGCCTCAACAACATGTAAGTAgaaactttttattatttt
tggttgTGTAGTGTTCTCTACTGAAgggcttcatttttctttttcctagg
gCTAGATAATAAGTTAGAAGGGGTTGAAGCCGGAgtacaggcccggcgga
agcggggagcctggggagacttcagcctcctcacttttaagaaaatgaga
ttttttatcaaattcctagcaaatttctcattttgagccttcagtcTCCC
CAATCTTAccgttgttccgccgggcctggaGTAAGGATCTTTTCAATATC
CATCTatcattttttttcgtcactttcaaCGCTGTACTTATAATCATGAC
TGCAATCAGGCAATTAACATGGCAGATAGCCGTTTACTAAATTAACATAA
AAGCTCAACTATTCCAAAGGAGAGACACAAGTTTCTGAACAGATAGTTAT
AAGAAAAACTCTATAAATTATCTCACCTTCCTTTTTTAGCGCCTTTGTCT
AGTCCTACTAATCTAGACAAGTAGCAAGGTTTTTTAGCATTGAATTCATC
TCCGACTACATAAACCAAATCTCAGCTGCCACAGTGCACAGAGAACGTCG
TTAAAATATCCAGCTGAGGTCCctgatgaacgttgaaacgtgtgtcagct
gggattACTCAACATTGATAATTTACTTCTTTTCCCAGGAAAGGAATATT
TGGCCACTAAGATTTTGATGTTCACACCGTCCATAGAAAGTCTAAGAAAC
GttcaaacaacgttgtgtaccagctgggtttttttttctggtttAAAATT
TGATAATCCTTTTTCTCTCTAGCATCAACAGAGTAGTATGACTACAAATT
CAACCACCGTCATCATGGCTGGCGGTATGGCTCCACAACCGCAAATTGTG
CACCAAGCGGCACCACCAAATTACATGGCTTTATCATGGATTGTCTGTCT
GTTCTTTTGTTGGCCAATTGGTATCGCCGCCATTATGGCTTCCTCCGGGG
TAAGTTAAAGACTGTAGTTTACTGTTTGTTAATTGATGAAAACTAATGAA
AGCCTAGCTTCTGATGATGAAAAGCTTTTTGCTAAACCCtatgtaaaaaa
caaaaaaaatatataaactcgACCAATGAtggcttcaaaaagttttgccg
AACGTGTCGCAATTTTATTCCCGGTCACGGAAAATCATGCAATGTACCTA
TTAAGCTAATGAAATGCATTATGGGTTGACTCACTAAATCATTTCATCCA
CTAAGCAGACGCAATTTATCCTTAATGATTTAAACCAtggttctttattt
tcactcaGTTCTGACGTTATGTCACTGGCAAAAATTAGGATCCCCAAGTT
AAGATCTTTAAAACGTCAAACGATGGGTGTTGTAAACAGGGATGGTAAAT
TACATCATCACATGTCTCACAGCCACCTAGACAGGATCTAGACATTTTAT
TGTCCCTAATCGAAAATtctctacatgttttttttttatattgaatttca
aatagggATGGAAATACTGCTAAtagggctgaaattgtagggtatttgtC
TCACCGAGAACGGAATTTCTGCTAATTTTTCCGGTGGGGCGCACCCCTGG
GACACATGAGTGTCAAattgaaaatgcttcaaaatatcaaaagtcaTTTC
TGTTGTTTTACAGGTTGATTCGGCCGTAGCAGTTGGCAACTATGCTGAAG
CACAAAGTCAATCATCACGAGCAAAGGGTCTGGGAATAGCTGGTCTGGTC
TGTGGAATTAtcattattggtatcattgtgaTACATTTCACTGTTATCGT
GAAGTCGACTTCTTCGAGCTACTATAGCAAACAATGAGGACGATACTTGG
TGTTTTTATATGGAGTATATAAAAATCATTTATAGTTTATTAATGATATA
TACATTAGAGCATAATAGAGCATCTTTGAATTTCTTGTAATTAAAGAGAG
AACTTTAAATTTCTCTATCCTCGTTTTCAATCGAAAGCGTCAAAGTGGTT
TCAATTGTATTTTAATCGTATTCGTCATTTTTCCTGTCACTTTTCTTAAA
GAATTGCTCACTGTAAGCATAATTGgttccttttttgttttgatataatc
aaggataattttttttaccataaaaatcTGCTACTATTTTAACTGCTTAT
AAAAGTGGATTTCACttgtaaatattttaaacacttagtttttgggataa
ttt Coding sequence (CDS) from alignment at sc0000107_pilon:42095..46097+ >MSTRG.13451.1.p1 ID=MSTRG.13451.1.p1|Name=MSTRG.13451.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2436bp|location=Sequence derived from alignment at sc0000107_pilon:42095..46097+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTAGTCAAGcaccaccatacaaccctgcatcagcaccacagtaccc
acccacctcacaaccctacccaccaaccTCTCAGCCTCAATATGCACCAA
CCTCTCAACCCTACTACCCACCCACTTCTCAACCGCAGTACCCACCTACC
TCTCAACCAGGATATGGGTACCCACAAAACCAGCAACCACCACCCAGTGG
AAAATACCCCGAGCCTCCACCAGGGTATACTGCTCAACAACCCATGCCTC
AACAACATCATCAACAGAGTAGTATGACTACAAATTCAACCACCGTCATC
ATGGCTGGCGGTATGGCTCCACAACCGCAAATTGTGCACCAAGCGGCACC
ACCAAATTACATGGCTTTATCATGGATTGTCTGTCTGTTCTTTTGTTGGC
CAATTGGTATCGCCGCCATTATGGCTTCCTCCGGGGTTGATTCGGCCGTA
GCAGTTGGCAACTATGCTGAAGCACAAAGTCAATCATCACGAGCAAAGGG
TCTGGGAATAGCTGGTCTGGTCTGTGGAATTAtcattattggtatcattg
tgaTACATTTCACTGTTATCGTGAAGTCGACTTCTTCGAGCTACTATAGC
AAACAATGAATGGGTAGTCAAGcaccaccatacaaccctgcatcagcacc
acagtacccacccacctcacaaccctacccaccaaccTCTCAGCCTCAAT
ATGCACCAACCTCTCAACCCTACTACCCACCCACTTCTCAACCGCAGTAC
CCACCTACCTCTCAACCAGGATATGGGTACCCACAAAACCAGCAACCACC
ACCCAGTGGAAAATACCCCGAGCCTCCACCAGGGTATACTGCTCAACAAC
CCATGCCTCAACAACATCATCAACAGAGTAGTATGACTACAAATTCAACC
ACCGTCATCATGGCTGGCGGTATGGCTCCACAACCGCAAATTGTGCACCA
AGCGGCACCACCAAATTACATGGCTTTATCATGGATTGTCTGTCTGTTCT
TTTGTTGGCCAATTGGTATCGCCGCCATTATGGCTTCCTCCGGGGTTGAT
TCGGCCGTAGCAGTTGGCAACTATGCTGAAGCACAAAGTCAATCATCACG
AGCAAAGGGTCTGGGAATAGCTGGTCTGGTCTGTGGAATTAtcattattg
gtatcattgtgaTACATTTCACTGTTATCGTGAAGTCGACTTCTTCGAGC
TACTATAGCAAACAATGAATGGGTAGTCAAGcaccaccatacaaccctgc
atcagcaccacagtacccacccacctcacaaccctacccaccaaccTCTC
AGCCTCAATATGCACCAACCTCTCAACCCTACTACCCACCCACTTCTCAA
CCGCAGTACCCACCTACCTCTCAACCAGGATATGGGTACCCACAAAACCA
GCAACCACCACCCAGTGGAAAATACCCCGAGCCTCCACCAGGGTATACTG
CTCAACAACCCATGCCTCAACAACATCATCAACAGAGTAGTATGACTACA
AATTCAACCACCGTCATCATGGCTGGCGGTATGGCTCCACAACCGCAAAT
TGTGCACCAAGCGGCACCACCAAATTACATGGCTTTATCATGGATTGTCT
GTCTGTTCTTTTGTTGGCCAATTGGTATCGCCGCCATTATGGCTTCCTCC
GGGGTTGATTCGGCCGTAGCAGTTGGCAACTATGCTGAAGCACAAAGTCA
ATCATCACGAGCAAAGGGTCTGGGAATAGCTGGTCTGGTCTGTGGAATTA
tcattattggtatcattgtgaTACATTTCACTGTTATCGTGAAGTCGACT
TCTTCGAGCTACTATAGCAAACAATGAATGGGTAGTCAAGcaccaccata
caaccctgcatcagcaccacagtacccacccacctcacaaccctacccac
caaccTCTCAGCCTCAATATGCACCAACCTCTCAACCCTACTACCCACCC
ACTTCTCAACCGCAGTACCCACCTACCTCTCAACCAGGATATGGGTACCC
ACAAAACCAGCAACCACCACCCAGTGGAAAATACCCCGAGCCTCCACCAG
GGTATACTGCTCAACAACCCATGCCTCAACAACATCATCAACAGAGTAGT
ATGACTACAAATTCAACCACCGTCATCATGGCTGGCGGTATGGCTCCACA
ACCGCAAATTGTGCACCAAGCGGCACCACCAAATTACATGGCTTTATCAT
GGATTGTCTGTCTGTTCTTTTGTTGGCCAATTGGTATCGCCGCCATTATG
GCTTCCTCCGGGGTTGATTCGGCCGTAGCAGTTGGCAACTATGCTGAAGC
ACAAAGTCAATCATCACGAGCAAAGGGTCTGGGAATAGCTGGTCTGGTCT
GTGGAATTAtcattattggtatcattgtgaTACATTTCACTGTTATCGTG
AAGTCGACTTCTTCGAGCTACTATAGCAAACAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:42095..46097 + |
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