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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:27361..32654+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13449.2.p1 ID=MSTRG.13449.2.p1|Name=MSTRG.13449.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5294bp|location=Sequence derived from alignment at sc0000107_pilon:27361..32654+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCAAAAATAAAGCTGTTAAAATCGATCTTCGTTTTGGTCAAAATGTGGG
AAAAGGTGGAGAATTACCAATAATGACTTTGGTTTGTGATGATAAACAGC
TGTTACAAGATGCTAAACAGTATATCAATCAATTAATGTGTTGTGAAAAG
CCTTCAGGCAATGATAGCGATAGCGTTCTGTGTCATTTTTGTCGAAAGAC
AATCGCCTTTGATAATGCCAGGCCACCAAGGAAGGTGAATCAAGCTGTGG
GAGAGAATAAACAAGAATCGGATGAACAATCGGATATGGAGAAGAAACAA
AAGGTGTGTATCTTTTTAATAACCCTACATTGGGTAAAATCGAAATCCAA
ATGggaaatatagaaaaagaaccctgtgccacagacccactgggacccca
gccccactggtaaatttggcaaaaatttcgtccccggtgggaaaataact
ttgatttcatccccactcgaaattccatgtttaaaaattgtactccaaaa
ccatccccactggatcattaaccttggaacaatagaattatCCTcatcgg
gatttcaataggaatttttattcccactgaggaaaaaagttccagatggg
ctgtgagacaggggtgtagaaaAATAAAGACATTTTTCACGATTCTAGAC
CCCAGATTTTAAGGGCTGTTTGGTTCATTCATGTTTTGGTTCCTCATATT
ggccaaaattaattccaaaAGCTTGtccacaaaaatttttaatGCTAAAT
GTTTACTTTATATCTTTATTTCTAAAGCCTTGTATAAAATCATTCTGAAG
TCACAGCCTACAGTACTTGGATGCGATTACAGTATATATCTTTTACTCGA
CGGACTGTCTTCTTAggtaactcgaacaagttttcttgtctcTTTAGTTA
TTAATCTTAcaccataactcgaaattcTCGTAACTCAAACAAGTTCTCCG
TGTGTggttgagttatggagactcaattATAcaggagtctgctaaatcac
gtgccacgcgtgccagcgtgccatcgGTTTTTAAGCGTGCATGTGTCAGC
GTGCCATGCGAGCACGCCGGATGGCatgccgaaattcggatggcacgcca
aaattcggatggcacgccaaaattcggatggcacgccgaaattttaatgg
cacgccaaatttggatggcacgctggcacgttggcacgctaaAGCACGTT
GGTacgctggcacgttggcacgccaaggcGCGTTAGCATGCAGGCACATA
GGCACGCTGGCATGcgtggcacgcgatttagcagactcattatacagtgg
agtctccataattcgaacacgcaaggggaacacaaatttgttcgagttaa
ggaaatttcgagttatagagttaaGTCTATAAGGccttgttaactgaagg
gacgagaaatcTCGCTTGAGTTAAAAAGAcaatcgagttatagaggtttg
gagactcaattgtactaaaataacaaaaatcacATTTCTTTAAGGATGGC
AAGATTGTCGAGAATGAAGCAATAGTTGTTGGTGACGTTGGAGTTCGATT
GCTTTTATGTGGGTGTACCTTTTGTGTGGAATGCTTGAAATGGTATATCA
ATGGAACATTGGAAAACCAAGAAGGTATGTAATAGGATATACAGTAGTAC
TTTAAGGGCAAAAACTTTCGTGTTAcgtgttttatgagtttttgttagca
aaaaggtaaattttatatgacACCCTtgcctctgtgacccagtgggatcc
accccactcgtcaccccagtgaaaaatatttccaaaaatcgCCCATTTTT
TCACCCCATTAGATAAATCACTCACCCCACTGGAATACTGTAACTGAAAA
TGACCCCATTGAAAGATACGAAGAATCCGCACATACCCCActcaaaattt
tatgattttgactTACCCCAGTAGAATTCTCACATCAAAAGGGTCACCCC
ACTAGAATCTCCCCTTCTCTTATGAAATCCACTTTTTAAATTAACGAAAA
TGCATAAAAAGGCTCAATTTCTTTGCTTGCTTCGCTCGCAATCAAAATTG
CATAATTGTTCATATCACCGCGTCGTCAAAAGTAGTAGCAAGTTATGATC
TAAAAAGATGGTCTAGAGTATATCCACTATGTATGAAAGTCCTTATCTTT
AATAAAAAGGCAAGAGCAAAATGACTCGTGTTTTTCCGTTTTTCAGTCAA
GCTTCAAGATCTTTGAtcggattaatcggattcaattttccttgttttag
tcaacttttaggaaattaactgagaagaaatgctttctttttcttttatc
ctttagaggacaaatataagtacattctgtgaaaatttcaagtctctagc
actttcctatccggaattatcttgattccaatttagagggatctcaagcg
ggatgaggacgggatagagggatctctcgaaaacgaaagtgcccaataac
tggtgaataattttatgtatcaaaaaactttttttcctacttttacattg
ctataaggatactttatataccaaatttcatctccttatgagcactactt
aaggagatacaagggatattagccaaaataatcccgattttgcaaaagtt
ccaatgaaagatcactCAAAAGATAGGTCGGTCGTGGGTCGATCATTCAA
GTTCGTGAATCAGAAGCGAAAATAATGATGACTTTCAGGTAGTCTTGATG
ACTagagaaaaattgatgaagatgCAAGTTGCTcggttaaataaaaatga
agcatgAAAACTTTGATGGACATAAATAAATtagttgaaattgtttttgt
ttttttaatttttcaaaattgcaaaattcgAAATAAAGGAGTGATTTTAG
CCTAAACAAgagaatcaaaaatcaaatatttttcccgtcggtgcaaacca
tggttgcgccacCTTTGTCACtacatctttttaaaattaagttttgtcgg
tcaattttaaaatcattcGGTTAAAAGTTGATAAATGCatttatctttcc
attgattcatttttagcttccccttttgccccaatttcccccttttttAC
TTCAAGGTTGACGTTGTATAGACGTTGAATGAATGTCGCTCTTGCAAAAT
CGTCTCTCCTTTGGGAGACGTCTCCCAAACGGGATGCGTCTTCCGATCGA
AGTATATTGCCTTATTGTTAGTAATGGATGATGTTTCGTGTTTATATGAT
TAAAAGTCTTATACCTCACCGTTTCAACGCAGTTGAATAATATATTCCCT
ATCAGTAGCCTCAGTACATTCACAATTCTGTGAAAGTGTAACAACGACTC
CGCACTACATTTTATAATTTAACATTTGACTAGCAATGCCATCTACTCTA
CCTCAGAATAAACTTTCAGAAAGATTTTCTTCACCCCAGTGATAACCGAG
CAAAAATTGGTCACCCTActcaattttttgggaaatatATCTTGTACCCC
AGtggatttcagatttttcacaTCCCACCCCACTGGATGTTTCTTTCACA
CCCACtggggcacagagacaggggtgttatatgAATTCGCAAAAgttcta
tctgtgaaatttcggctaaaaccataattcACGAAACTTAAATTCgttaa
atttcgcgactttttgacaacacacccttgtctcacagccTCGGAGAAAC
TTTCCCCACAGCGGCGATAAAACTTTCTATCGAAATACCATTTGGGATca
gaaattctattgctcccAGCTTATAAAAATCCAGTACACGGGTgattttg
gagtgtaattttttttacattcaatTTCAAATGGAAATTGAAAGTCtatt
tcccagtgggtctgaaattgtaaagtatttttccaaccgggacgaaattt
ttgccaaattttccactATGAGGCTGGGCTCCCATCAAGtctttgacaca
ggggtgttgaGAAACTGGTTACAGGTTAATTCATTAGATCTTATCGgagc
ttttgatttttctaaaaaagagatGCAttatgggattgtttcgggggtat
tacaatagaattccctcgaggaatccctaagagatttctattgtaatact
cccgaaacaatcccacaatgcatcgctttttttagaaaaataaaaaactc
cgatgaGATCTATAATGTGATAATGCTTAGTAAGCTATGCACAGTTTGTT
CAAAGATTTAAGATTGGGTATGTTTATAAGCATTGTGCtcaccaaaaaaa
aacttctttgaAATATTCTGATTTCCTTTTCCTTCAATTTATAGTTCAAA
AGATACACGAACCAATCCACTGTCCAAAGTGTAACAAGGTCCTTATGATT
AAAGATCTCAACATACTACCAAACTACCTCAAAGAAAAAATCTGTAGAAA
GATCTTTACCAATTACCTTCGAGCTCGACAAAAGAATGGAAGAAACCGAG
AAAGATTCGATATCTGCAGAGAATGTAAAAGTATCTTTATTTACGACGTC
GCCGATAAAGGAATCTTCCGTTGCTGGAACGATAAATGTCGTCTTATGTC
GTGCAGTGTTTGTAAAAGACGTGTGATGAGCAATAATGAAATTGATTTCG
AACAACACAGGTCCTGTTGGAACGATGCAGTAGAAAGATGTGGTAAGTAT
TGAACAGAATACGTTCTCGTTGTGGGaaaaaaaCTATAGGTGAAATTAGG
AGGCTTCAAAGTACCTGTaacctaaaaataaagtttctAGTCCCAAAAGA
ATGAAAAGCtcattaccttatcggccaaaacttagtcggtcttaatttta
gtcggccttaattattagtcggccctaattttagtcacctcgtcaaaatt
tagtcgctaagggccgactaataattaagaccgactaaaaatttgggcaa
tttctaaatttacatgCATATGGAAAATAGACACCTTTTAATGATAATTC
ACTATAGTCACTTTAGGGcagactaagttttggccgataaggtactttct
tcattatcttcattttttccgaaATTAGAGTGCTctgaaatatcttttca
acggtatttaatttttcagaattgaaacttttgctgaaaaggggTAAGAC
AGAATATCATGGTACATTTATATCGAATGGACTTCAGCACTCAACTGTTA
ATacttttaatgggataaactttcgtagggattaaatttcgtgtaTGAGC
TCGTCCGCGAAATTTAAAGATTTCCCGGGGATTTCGCAGATGGCACTAAG
GAGACATTATTTTCACGATCTTGTGCCTATTACTGTCAAATTATGCATGT
CGGTTgctgaaatacgcattattagcgcttctttaaTGCCagta Coding sequence (CDS) from alignment at sc0000107_pilon:27361..32654+ >MSTRG.13449.2.p1 ID=MSTRG.13449.2.p1|Name=MSTRG.13449.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3588bp|location=Sequence derived from alignment at sc0000107_pilon:27361..32654+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCAAAAATAAAGCTGTTAAAATCGATCTTCGTTTTGGTCAAAATGTGGG
AAAAGGTGGAGAATTACCAATAATGACTTTGGTTTGTGATGATAAACAGC
TGTTACAAGATGCTAAACAGTATATCAATCAATTAATGTGTTGTGAAAAG
CCTTCAGGCAATGATAGCGATAGCGTTCTGTGTCATTTTTGTCGAAAGAC
AATCGCCTTTGATAATGCCAGGCCACCAAGGAAGGTGAATCAAGCTGTGG
GAGAGAATAAACAAGAATCGGATGAACAATCGGATATGGAGAAGAAACAA
AAGGATGGCAAGATTGTCGAGAATGAAGCAATAGTTGTTGGTGACGTTGG
AGTTCGATTGCTTTTATGTGGGTGTACCTTTTGTGTGGAATGCTTGAAAT
GGTATATCAATGGAACATTGGAAAACCAAGAAGTTCAAAAGATACACGAA
CCAATCCACTGTCCAAAGTGTAACAAGGTCCTTATGATTAAAGATCTCAA
CATACTACCAAACTACCTCAAAGAAAAAATCTGTAGAAAGATCTTTACCA
ATTACCTTCGAGCTCGACAAAAGAATGGAAGAAACCGAGAAAGATTCGAT
ATCTGCAGAGAATGTAAAAGTATCTTTATTTACGACGTCGCCGATAAAGG
AATCTTCCGTTGCTGGAACGATAAATGTCGTCTTATGTCGTGCAGTGTTT
GTAAAAGACGTGTGATGAGCAATAATGAAATTGATTTCGAACAACACAGG
TCCTGTTGGAACGATGCAGTAGAAAGATGTGaattgaaacttttgctgaa
aaggggTAAGACAGAATATCATGGTACATTTATATCGAATGGACTTCAGC
ACTCAACTGTTAATacttttaatgggataaactttcgtagggattaaAGC
AAAAATAAAGCTGTTAAAATCGATCTTCGTTTTGGTCAAAATGTGGGAAA
AGGTGGAGAATTACCAATAATGACTTTGGTTTGTGATGATAAACAGCTGT
TACAAGATGCTAAACAGTATATCAATCAATTAATGTGTTGTGAAAAGCCT
TCAGGCAATGATAGCGATAGCGTTCTGTGTCATTTTTGTCGAAAGACAAT
CGCCTTTGATAATGCCAGGCCACCAAGGAAGGTGAATCAAGCTGTGGGAG
AGAATAAACAAGAATCGGATGAACAATCGGATATGGAGAAGAAACAAAAG
GATGGCAAGATTGTCGAGAATGAAGCAATAGTTGTTGGTGACGTTGGAGT
TCGATTGCTTTTATGTGGGTGTACCTTTTGTGTGGAATGCTTGAAATGGT
ATATCAATGGAACATTGGAAAACCAAGAAGTTCAAAAGATACACGAACCA
ATCCACTGTCCAAAGTGTAACAAGGTCCTTATGATTAAAGATCTCAACAT
ACTACCAAACTACCTCAAAGAAAAAATCTGTAGAAAGATCTTTACCAATT
ACCTTCGAGCTCGACAAAAGAATGGAAGAAACCGAGAAAGATTCGATATC
TGCAGAGAATGTAAAAGTATCTTTATTTACGACGTCGCCGATAAAGGAAT
CTTCCGTTGCTGGAACGATAAATGTCGTCTTATGTCGTGCAGTGTTTGTA
AAAGACGTGTGATGAGCAATAATGAAATTGATTTCGAACAACACAGGTCC
TGTTGGAACGATGCAGTAGAAAGATGTGaattgaaacttttgctgaaaag
gggTAAGACAGAATATCATGGTACATTTATATCGAATGGACTTCAGCACT
CAACTGTTAATacttttaatgggataaactttcgtagggattaaAGCAAA
AATAAAGCTGTTAAAATCGATCTTCGTTTTGGTCAAAATGTGGGAAAAGG
TGGAGAATTACCAATAATGACTTTGGTTTGTGATGATAAACAGCTGTTAC
AAGATGCTAAACAGTATATCAATCAATTAATGTGTTGTGAAAAGCCTTCA
GGCAATGATAGCGATAGCGTTCTGTGTCATTTTTGTCGAAAGACAATCGC
CTTTGATAATGCCAGGCCACCAAGGAAGGTGAATCAAGCTGTGGGAGAGA
ATAAACAAGAATCGGATGAACAATCGGATATGGAGAAGAAACAAAAGGAT
GGCAAGATTGTCGAGAATGAAGCAATAGTTGTTGGTGACGTTGGAGTTCG
ATTGCTTTTATGTGGGTGTACCTTTTGTGTGGAATGCTTGAAATGGTATA
TCAATGGAACATTGGAAAACCAAGAAGTTCAAAAGATACACGAACCAATC
CACTGTCCAAAGTGTAACAAGGTCCTTATGATTAAAGATCTCAACATACT
ACCAAACTACCTCAAAGAAAAAATCTGTAGAAAGATCTTTACCAATTACC
TTCGAGCTCGACAAAAGAATGGAAGAAACCGAGAAAGATTCGATATCTGC
AGAGAATGTAAAAGTATCTTTATTTACGACGTCGCCGATAAAGGAATCTT
CCGTTGCTGGAACGATAAATGTCGTCTTATGTCGTGCAGTGTTTGTAAAA
GACGTGTGATGAGCAATAATGAAATTGATTTCGAACAACACAGGTCCTGT
TGGAACGATGCAGTAGAAAGATGTGaattgaaacttttgctgaaaagggg
TAAGACAGAATATCATGGTACATTTATATCGAATGGACTTCAGCACTCAA
CTGTTAATacttttaatgggataaactttcgtagggattaaAGCAAAAAT
AAAGCTGTTAAAATCGATCTTCGTTTTGGTCAAAATGTGGGAAAAGGTGG
AGAATTACCAATAATGACTTTGGTTTGTGATGATAAACAGCTGTTACAAG
ATGCTAAACAGTATATCAATCAATTAATGTGTTGTGAAAAGCCTTCAGGC
AATGATAGCGATAGCGTTCTGTGTCATTTTTGTCGAAAGACAATCGCCTT
TGATAATGCCAGGCCACCAAGGAAGGTGAATCAAGCTGTGGGAGAGAATA
AACAAGAATCGGATGAACAATCGGATATGGAGAAGAAACAAAAGGATGGC
AAGATTGTCGAGAATGAAGCAATAGTTGTTGGTGACGTTGGAGTTCGATT
GCTTTTATGTGGGTGTACCTTTTGTGTGGAATGCTTGAAATGGTATATCA
ATGGAACATTGGAAAACCAAGAAGTTCAAAAGATACACGAACCAATCCAC
TGTCCAAAGTGTAACAAGGTCCTTATGATTAAAGATCTCAACATACTACC
AAACTACCTCAAAGAAAAAATCTGTAGAAAGATCTTTACCAATTACCTTC
GAGCTCGACAAAAGAATGGAAGAAACCGAGAAAGATTCGATATCTGCAGA
GAATGTAAAAGTATCTTTATTTACGACGTCGCCGATAAAGGAATCTTCCG
TTGCTGGAACGATAAATGTCGTCTTATGTCGTGCAGTGTTTGTAAAAGAC
GTGTGATGAGCAATAATGAAATTGATTTCGAACAACACAGGTCCTGTTGG
AACGATGCAGTAGAAAGATGTGaattgaaacttttgctgaaaaggggTAA
GACAGAATATCATGGTACATTTATATCGAATGGACTTCAGCACTCAACTG
TTAATacttttaatgggataaactttcgtagggattaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:27361..32654 + |
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