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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000106_pilon:1105097..1109141- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13443.3.p1 ID=MSTRG.13443.3.p1|Name=MSTRG.13443.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4045bp|location=Sequence derived from alignment at sc0000106_pilon:1105097..1109141- (Clytia hemisphaerica_ch_hm2_pilon)
CACTTCAAAAAATATTTATTGAATCGATTATATTCATTATTTGCATTTCT
GAATAAGGAAATCCGAACAATCTTAAAGATTGAAACTTGAAATCCGAAAT
TAAATTTTACCGAGTTGACGGAAGAAGAAAAAAATGGACGAAGAAATATT
CCTTCGACAGAAACGCAAAAAATATCGTTTACGAAATTTCAATCTTCGAA
GTAAGAACATATGGTTTATTCGTCTTCGTCTTGTTTATTTATATGAAGTC
TTGGTATGAAAGAAATTAGTACAGTCGACCTCTCTATTTCGATTTTCAAG
GGACAGAACATCTTTTTCGAATTATAGAGATCTTCGAAATACTTTCCTGC
TGAAAGGGACCGACGTTTTAGCTCGAATTTTAAAAAGATTCGATCAATTA
AAGAGACTCGCGGAATAGAAGAGAGTTGACCGAACTTGAAGCCCCTTGGA
GTTCTGAACTTTTAAACTCAACGGTATGATAAATGTTCAATGTTCAATGT
TCAAATTTTAGCAGAACTCGAAAAATTCTACAAAACACGCTTTTTATATA
AGAATACCTACACTTTATAAGAATGTCCAATATGAAAATGGCCAAAAAAC
TAAGAATAATGCTAAGAATATCACCATCATGGAAGTTTGCTACTCAGGCT
AAGAATGCCATTTTTAGAGCATTTTCGATTATAAATTGTCAATTACCCCC
AAGACGCCAAGTAAGGCTTATTTCTTTCCCAAAATTGCCATTTTATGGTT
GAGAAGTATGTACTAAATGTTAAATCTAGTCTGAATTGGGATCCTATAAC
CTAAGAATGCTGTAAGAATATTTTAGGATGATTTCCCAAAAAAGTTAAGA
ATATCCATGATGAAATGGATTTACACCATTCTTATAAAAAAAAGCGTGTA
ACAAAACCATAGTATTTTCTAGAAATGTTTGCTAACAGCGTTTGTCTTCC
GCCTAAATCTTCTCTTAATTTGATAAAACTTTGGCTTGTAATCTTAAGTG
TTTTTTTGTTGAAAATAGTTAAAGGGAAATGGATTTCATGATGGAAACCA
TTTAACAAAGGTACCAGCACATTAGAGATCGTGAAAGTACATTAAATCTA
TTTAAAGGCTTCCATGTTCCATAAGGAACTCTATAATATGCACTCAGTCG
TGCTGTTCTAAATCAAGCAAGCCAAACGATATCTCGTGGTTCCTCTTGAA
GGGACAGATGAAATAGAAAAGACATTTTTACTAAGGTACGAATTATTTTT
ATGCGAAAAGATTGGTTACATGTTCAAAATGGTCACTAGGATCGAATCTT
GGTAGAAGCTTGCACTATTTCAACGGGTAAACTTTTATATTTTTGAAAGA
TCTACCGTACGTCGAATACTTAGAATAAGTATTGGAGTTACAACGCCATG
AAAATTAAGGAACTTGTAAAACATATTTTGAATTAGATTTTCTATTCCTC
AACTTTTTGTTTGAAAAAGAGGTTTAGGGAATAACCCTGCTTACAGCTCT
TTAATCTTGAATGCTTAACAAAGAGAATTTTGAAATCTGATGTTGTGAAA
ATGTTTGTCATTGGGCGGGAATCGCTCCCACAATCAATCAGTGAGGGAAC
CAATTGACTTTATCTCCATGACGTCCATATAACGTTTGAGTAAATGATTT
TGATATTTGGTACCCCACGAAATCAGGAAAGTTAAATTACTCTAATCAAC
AATTATACAATTGACCCGGAAGAACTGTATACTGGATCACTAATTATATC
GATAATTGCGTGAAGCATGTGCCAGTCGTAGATCTTTTTCTCTAGTGTTT
GACTTTGGTTTGTTTTAGTTTTGATTGTTTTTCTTTTACTTTTCTCATGT
GCTTTGACGTAGTTAAAATGTACAATTAAACAATGGGAACTTAGGGAGTC
TTCTTTTCAAGATTCTTTATTTATTAGGTGATAAAAATTTGGGCATGGTT
GAACCTTTGGGCGTGGCCCTAGCATGTGCTGTATATGTAGCGAAACGAAT
ATTATAATAAAATAGCTTGTATTTCAGTGATTTCCATTATTTCATTGTCG
ACTACGAAAACATTTAGGAAAATATCAAAACATCTTTTCATGGAGAAAAG
CCTTGCTCTAAATCTAATATAAACTTAGGAAAAACTGTTTTTGGCTCCTG
TCTGAACCTTTTTGCAATGCTTTACACGTCTCGTAGTTAATTTCAGTAAC
AACTTTCAAGATGTGAAAAGAAAAAACTTTGACAATTTATGTTTTTGTTC
GTTCTCAGGAGCAGAAGAAATGGTTGCCACAAAGAAATCACAAACTACAC
TCTGGATTTATTTGTATCGTTGTTCGAAACTCGGGCCTCGTTCTTTATGG
ATCAAACAATCGAATTGTGTCTTAGAAGAACTAACCAGAACGATATGCGA
TAAAGCGATTCGTCATCGAATGACAAAAGCCTCTATCGATCATTCTCCGA
TCAAAAGTCCGAAACTTTACGAAACGCCGTCCGAGAAAACAATGCAATGC
GTGAAAGATATGATTGATTTGATAGTCTCTTCACATCCGGAACTCTATAC
GGAAATCACATTCAAGTTAAACATACCGGTTCAAGACGAACGGACTGTAT
GCAGGACGTATAGGTGAGCATCATTATAAAGACCACACCCATACATTTAT
TGCCCCCCCCCCTGTTGTTTTGAAACTATATTGAACAATTCTAGTGGTTT
GTTTTGAGTCATTTCTAACTAATATTTCGTTTCGTATAAGGGATCTGTAG
CATGTAAGCTTGGTCAAAGTATTGTCTAACCAAAGGTATATAGGTGAAAT
GTCGTTGAAAAACATTGAGCTGTTTAGGTGTTGACTCTCTTTAAACTGGA
GACGGAGCAAAAAAAAAACATTTAAGGGCGGAGTTTGAATCGGGTGGAGA
TTACAGGAAATAAAGACACATCCGAGAATATTCATATATTCTTATAGGTT
GCACTTTATAGCCGAAGTTGCATTTTTAGCATATCCATTCCCATTCATTT
TATTTTAGTGAGTTTGCTGAGAATCTGTTCAAGCGAGGAGTTTCATGGCC
GCTCATCATTTCATTGTTGTCGTTTTCTGGAAGTCTAGCAGCGGAGTGTA
CGCGGAACGGGCGGAGTATTTTAGTACGGCGTATTTGTGATTGGGCAACG
TTATTTATCGTGATGAGACTGAAAGATTGGATACAAGATAATGGCGGATG
GGTGAGTTTAATGATATTCGTATTTCATATTTTTCGCCCTTTTTTTCCTA
TAACGGGCACAAATCGCAAAACAATTTCAAGTTGCAAGACTTTCTGTCTC
CACTTTCACGCGAAATGGGCGACAGTTTTTTTCTTAACCTTTTTTGCCTG
AAGAAAAATTTATGACATAAAAAAGTTTCGCGCGAACAAAAAAAAGTTGC
CTTCAACTTTTTTCAACCGTTACGTCAATGTTGACCAGTGGAATTGCTTC
ATTTTTCAACGGACCAATGACCTTACAAAAACTTTAAAAAGTTTTTGCTC
ATTTCGCGCGAAAGTGGAGACCGGCCTTATTACCAAATCAACTAATCAGT
GACATAGAAAGTAATTTGATTATTGAGCAAATTTTGGAGCGTTACGTTAA
CAGGTAACTTCGATAGTTCATGACCAATTTAAATCAGCGGGAGTTTTTTA
TGGACTGGTCTACAGTTAAATTCTTTATGGCAATTTTCTAAGCTTTTGTT
TAATTCCCTTTTTTAGGATGGAATGTACGAATTCTTTTACCAGCCTACAC
TCAACAATAATAGTGTGTTTCCTTCAGATAAACTCCAAACTCCAACAATT
AAATGAGTGGAAAATCGCCATTTCCAATGCAGTGAAACCTGAAAAGGCTG
CTCGTTTTGCACTGGGATTTTTCATATTCTTGGCTTTGTTACTAATAACA
TTCTTTAAAAGCACATCAACAGAGTGCAAATCTGGAGGCGTTAGAAGCAA
GTTTAGTATTTATAGAGACTGTTAAGTAGTGATTTTGAGCCATCTGAGTT
ATTAGAGTTATCGAATTAGGAATATTCCTTTTCTTGAATGAGAAT Coding sequence (CDS) from alignment at sc0000106_pilon:1105097..1109141- >MSTRG.13443.3.p1 ID=MSTRG.13443.3.p1|Name=MSTRG.13443.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2820bp|location=Sequence derived from alignment at sc0000106_pilon:1105097..1109141- (Clytia hemisphaerica_ch_hm2_pilon)
GATGGAATGTACGAATTCTTTTACCAGCCTACACTCAACAATAATAGTGT
GTTTCCTTCAGATAAACTCCAAACTCCAACAATTAAATGATGAGTTTGCT
GAGAATCTGTTCAAGCGAGGAGTTTCATGGCCGCTCATCATTTCATTGTT
GTCGTTTTCTGGAAGTCTAGCAGCGGAGTGTACGCGGAACGGGCGGAGTA
TTTTAGTACGGCGTATTTGTGATTGGGCAACGTTATTTATCGTGATGAGA
CTGAAAGATTGGATACAAGATAATGGCGGATGGGAGCAGAAGAAATGGTT
GCCACAAAGAAATCACAAACTACACTCTGGATTTATTTGTATCGTTGTTC
GAAACTCGGGCCTCGTTCTTTATGGATCAAACAATCGAATTGTGTCTTAG
AAGAACTAACCAGAACGATATGCGATAAAGCGATTCGTCATCGAATGACA
AAAGCCTCTATCGATCATTCTCCGATCAAAAGTCCGAAACTTTACGAAAC
GCCGTCCGAGAAAACAATGCAATGCGTGAAAGATATGATTGATTTGATAG
TCTCTTCACATCCGGAACTCTATACGGAAATCACATTCAAGTTAAACATA
CCGGTTCAAGACGAACGGACTGTATGCAGGACGTATAGATGGACGAAGAA
ATATTCCTTCGACAGAAACGCAAAAAATATCGTTTACGAAATTTCAATCT
TCGAAGATGGAATGTACGAATTCTTTTACCAGCCTACACTCAACAATAAT
AGTGTGTTTCCTTCAGATAAACTCCAAACTCCAACAATTAAATGATGAGT
TTGCTGAGAATCTGTTCAAGCGAGGAGTTTCATGGCCGCTCATCATTTCA
TTGTTGTCGTTTTCTGGAAGTCTAGCAGCGGAGTGTACGCGGAACGGGCG
GAGTATTTTAGTACGGCGTATTTGTGATTGGGCAACGTTATTTATCGTGA
TGAGACTGAAAGATTGGATACAAGATAATGGCGGATGGGAGCAGAAGAAA
TGGTTGCCACAAAGAAATCACAAACTACACTCTGGATTTATTTGTATCGT
TGTTCGAAACTCGGGCCTCGTTCTTTATGGATCAAACAATCGAATTGTGT
CTTAGAAGAACTAACCAGAACGATATGCGATAAAGCGATTCGTCATCGAA
TGACAAAAGCCTCTATCGATCATTCTCCGATCAAAAGTCCGAAACTTTAC
GAAACGCCGTCCGAGAAAACAATGCAATGCGTGAAAGATATGATTGATTT
GATAGTCTCTTCACATCCGGAACTCTATACGGAAATCACATTCAAGTTAA
ACATACCGGTTCAAGACGAACGGACTGTATGCAGGACGTATAGATGGACG
AAGAAATATTCCTTCGACAGAAACGCAAAAAATATCGTTTACGAAATTTC
AATCTTCGAAGATGGAATGTACGAATTCTTTTACCAGCCTACACTCAACA
ATAATAGTGTGTTTCCTTCAGATAAACTCCAAACTCCAACAATTAAATGA
TGAGTTTGCTGAGAATCTGTTCAAGCGAGGAGTTTCATGGCCGCTCATCA
TTTCATTGTTGTCGTTTTCTGGAAGTCTAGCAGCGGAGTGTACGCGGAAC
GGGCGGAGTATTTTAGTACGGCGTATTTGTGATTGGGCAACGTTATTTAT
CGTGATGAGACTGAAAGATTGGATACAAGATAATGGCGGATGGGAGCAGA
AGAAATGGTTGCCACAAAGAAATCACAAACTACACTCTGGATTTATTTGT
ATCGTTGTTCGAAACTCGGGCCTCGTTCTTTATGGATCAAACAATCGAAT
TGTGTCTTAGAAGAACTAACCAGAACGATATGCGATAAAGCGATTCGTCA
TCGAATGACAAAAGCCTCTATCGATCATTCTCCGATCAAAAGTCCGAAAC
TTTACGAAACGCCGTCCGAGAAAACAATGCAATGCGTGAAAGATATGATT
GATTTGATAGTCTCTTCACATCCGGAACTCTATACGGAAATCACATTCAA
GTTAAACATACCGGTTCAAGACGAACGGACTGTATGCAGGACGTATAGAT
GGACGAAGAAATATTCCTTCGACAGAAACGCAAAAAATATCGTTTACGAA
ATTTCAATCTTCGAAGATGGAATGTACGAATTCTTTTACCAGCCTACACT
CAACAATAATAGTGTGTTTCCTTCAGATAAACTCCAAACTCCAACAATTA
AATGATGAGTTTGCTGAGAATCTGTTCAAGCGAGGAGTTTCATGGCCGCT
CATCATTTCATTGTTGTCGTTTTCTGGAAGTCTAGCAGCGGAGTGTACGC
GGAACGGGCGGAGTATTTTAGTACGGCGTATTTGTGATTGGGCAACGTTA
TTTATCGTGATGAGACTGAAAGATTGGATACAAGATAATGGCGGATGGGA
GCAGAAGAAATGGTTGCCACAAAGAAATCACAAACTACACTCTGGATTTA
TTTGTATCGTTGTTCGAAACTCGGGCCTCGTTCTTTATGGATCAAACAAT
CGAATTGTGTCTTAGAAGAACTAACCAGAACGATATGCGATAAAGCGATT
CGTCATCGAATGACAAAAGCCTCTATCGATCATTCTCCGATCAAAAGTCC
GAAACTTTACGAAACGCCGTCCGAGAAAACAATGCAATGCGTGAAAGATA
TGATTGATTTGATAGTCTCTTCACATCCGGAACTCTATACGGAAATCACA
TTCAAGTTAAACATACCGGTTCAAGACGAACGGACTGTATGCAGGACGTA
TAGATGGACGAAGAAATATTCCTTCGACAGAAACGCAAAAAATATCGTTT
ACGAAATTTCAATCTTCGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106_pilon | genome | sc0000106_pilon:1105097..1109141 - |
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