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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000106_pilon:845087..847206- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13422.1.p1 ID=MSTRG.13422.1.p1|Name=MSTRG.13422.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2120bp|location=Sequence derived from alignment at sc0000106_pilon:845087..847206- (Clytia hemisphaerica_ch_hm2_pilon)
CATTTATGATGGATTAGCGAGGATCACAATGGCGAATAGAAGACTGGTGA
GGGCAATCACTGAAAATATTAACCAAGGTAGTAGCGTTTCATTGGTCGAT
CAGAATAACAATGGATTGCGCTCTAAACAATTTCAAGAGGCATCTTGCTG
TTCGAGTAAACAAAAGAGCTGTAATGGTAAGTTGGTTGAAAATTGTTATT
TATATAAGGGCAATGTTTATACGAACATAAAAAAGGACCGATGTCCAAAT
CTAAGAGCATTCTAAAGACTGTGGCACATAAAAACCAAAATCTCAATAAA
ATGCTTAAAATTTTAGTTTCAAATTCAAAGAGTTTATAAGTTGCTCTCGA
TTTGATTTTATGTTTTTACCAAAATGAAGTCCCTCAAATGAAACAGTATT
CGCGTCCAGGGGAGACCAAAAGACAACTCCTAGTAAAGAATGCTTCGACT
TAATAATCTCACAACGAAAAAGAGAATTTATAAGAATAACAATGGATTCA
GAATCTATATGAACTTTGTTTTCCAATTTTTAGTTATCACTGAGCGTAAG
ACAAATGTAATTAAGCGTCTTTGGCGACGCTTGAAAGGGAACAAACCACA
AAAGAAGCAAACTGTCAACCGAGAAACTGCAGACGAAGTAGTAAAATCAG
AAAAAGTGGAACAAAAATGGTACCATAAGCTGTCATGGTGTGGTAATGAC
AAAAATACGGATACCGAGAACAAAGTCAAAGAAGACTGGGAATTAGCCGT
GACCGGTGAATGCGATTACTCAAAAGGCGATGCATTTCAAGTGAACAGTA
GCGAGACTTTAATAATTGGTAAGGTCATTAGTTTATCTATTTTAGGAAAT
TACAAAGTTATCGACGTAGTGGTGTAGTGGTCTTTGTCCTTACCGTGTGT
GAAGTCTGAGTTCGATTCCCACTCAGTGCTAGTGCTAGTTTAATCCCTAG
CAGTAGCCTCACATTACATGGGTTGACCCAGGGCCTGGCTCTCAAAGATT
GAAAGTGCGATGATATATGAATCAAATGTTATACTTTATTTACAGCTGAT
AACACATTCATCGTCATTGGAAACAAAATTTTAAAAACACCTGTAGAAAA
AGTTGATGCAGGTGTTGAGGAAAATCGATTAGCCAACGAAAACGAATATC
ACCGCACAGGGATTGGTTCAATAGTGGATTTCGCATCCCCTAAACGAGGA
TTCCCTATGGTAGATGTTGATTCGTCAGGGTCATTCAAACCAGTATCAGA
GCCACGTGCTGCTAAGCGTGTAACAACATTTTGTAAGCTACAGCCGGTTC
CGACTACTACACAAAAGCAAGACTCCAGAGTGAGGCCGTCTGTAGATAGC
GGCATCGGAGGTTCGAACCCCAGCAACGGTCTGTCGGCTGAAAAGAATAG
ACCTAGCCCTCTGCTTATCGATACCACTCCCAAAAGGTATTCAAAAGAGG
AGATTAACGTAACACTAAAGAACTCGAAAAATGTTGCCTCAGCTATTTTT
AAACAAGTTAGTCGTTTATCTCTTAATGGCGCGTCAACAAGTGTTGATAA
AGATGATAGTTATGACAATGGCGCACTGTCAGTTGAGGACGAGGTCGACG
AGGAGATCGAGCGAGCCATGAATCAAGTACGTGTTCAACCCAAAGGAAAG
GGTGAATTTCAAATTGAACGCGAGAAACGCATGTTCAATCCGTTCATGTT
GCGACAGACACCAAACCTATCTGAAGGGGCGTCCGGTATGTGTTGGTCTT
TGTCACACCGGATGCCCGGCGAAGGCGGGTTTCGCTCGGCTACCCCAAAA
CCGAAACTCCCCGTTGCAAGGAAAAAGAGCATGAGGGAAGTACTATTACG
TCATGAGCACGCTAAAAGCGTAAAAGCCAAGAAAGATCAACGTAAACTGG
AGAAAATTACGCGTAGAAACCAGAGAGTGCTCGATGTTAGACAAAGCTTG
GAGGATAAGCTACAAGCTATGGCTTCTGGACAGGAAGCAAAAACTGAACA
AACGAGACGACGGCGTCAAGATTTACATACTGCACGTGTTGGCAAAACGG
ATCGCCGGTTGGAACTGGCGCGACAACGCCGCAAAGAAATAGCAGCCACC
GAAAAGAAAACAAAGAAAAC Coding sequence (CDS) from alignment at sc0000106_pilon:845087..847206- >MSTRG.13422.1.p1 ID=MSTRG.13422.1.p1|Name=MSTRG.13422.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4518bp|location=Sequence derived from alignment at sc0000106_pilon:845087..847206- (Clytia hemisphaerica_ch_hm2_pilon)
CTGATAACACATTCATCGTCATTGGAAACAAAATTTTAAAAACACCTGTA
GAAAAAGTTGATGCAGGTGTTGAGGAAAATCGATTAGCCAACGAAAACGA
ATATCACCGCACAGGGATTGGTTCAATAGTGGATTTCGCATCCCCTAAAC
GAGGATTCCCTATGGTAGATGTTGATTCGTCAGGGTCATTCAAACCAGTA
TCAGAGCCACGTGCTGCTAAGCGTGTAACAACATTTTGTAAGCTACAGCC
GGTTCCGACTACTACACAAAAGCAAGACTCCAGAGTGAGGCCGTCTGTAG
ATAGCGGCATCGGAGGTTCGAACCCCAGCAACGGTCTGTCGGCTGAAAAG
AATAGACCTAGCCCTCTGCTTATCGATACCACTCCCAAAAGGTATTCAAA
AGAGGAGATTAACGTAACACTAAAGAACTCGAAAAATGTTGCCTCAGCTA
TTTTTAAACAAGTTAGTCGTTTATCTCTTAATGGCGCGTCAACAAGTGTT
GATAAAGATGATAGTTATGACAATGGCGCACTGTCAGTTGAGGACGAGGT
CGACGAGGAGATCGAGCGAGCCATGAATCAAGTACGTGTTCAACCCAAAG
GAAAGGGTGAATTTCAAATTGAACGCGAGAAACGCATGTTCAATCCGTTC
ATGTTGCGACAGACACCAAACCTATCTGAAGGGGCGTCCGGTATGTGTTG
GTCTTTGTCACACCGGATGCCCGGCGAAGGCGGGTTTCGCTCGGCTACCC
CAAAACCGAAACTCCCCGTTGCAAGGAAAAAGAGCATGAGGGAAGTACTA
TTACGTCATGAGCACGCTAAAAGCGTAAAAGCCAAGAAAGATCAACGTAA
ACTGGAGAAAATTACGCGTAGAAACCAGAGAGTGCTCGATGTTAGACAAA
GCTTGGAGGATAAGCTACAAGCTATGGCTTCTGGACAGGAAGCAAAAACT
GAACAAACGAGACGACGGCGTCAAGATTTACATACTGCACGTGTTGGCAA
AACGGATCGCCGGTTGGAACTGGCGCGACAACGCCGCAAAGAAATAGCAG
CCACCGAAAAGAAAACAAAGAAATTATCACTGAGCGTAAGACAAATGTAA
TTAAGCGTCTTTGGCGACGCTTGAAAGGGAACAAACCACAAAAGAAGCAA
ACTGTCAACCGAGAAACTGCAGACGAAGTAGTAAAATCAGAAAAAGTGGA
ACAAAAATGGTACCATAAGCTGTCATGGTGTGGTAATGACAAAAATACGG
ATACCGAGAACAAAGTCAAAGAAGACTGGGAATTAGCCGTGACCGGTGAA
TGCGATTACTCAAAAGGCGATGCATTTCAAGTGAACAGTAGCGAGACTTT
AATAATTGATGGCGAATAGAAGACTGGTGAGGGCAATCACTGAAAATATT
AACCAAGGTAGTAGCGTTTCATTGGTCGATCAGAATAACAATGGATTGCG
CTCTAAACAATTTCAAGAGGCATCTTGCTGTTCGAGTAAACAAAAGAGCT
GTAATGCTGATAACACATTCATCGTCATTGGAAACAAAATTTTAAAAACA
CCTGTAGAAAAAGTTGATGCAGGTGTTGAGGAAAATCGATTAGCCAACGA
AAACGAATATCACCGCACAGGGATTGGTTCAATAGTGGATTTCGCATCCC
CTAAACGAGGATTCCCTATGGTAGATGTTGATTCGTCAGGGTCATTCAAA
CCAGTATCAGAGCCACGTGCTGCTAAGCGTGTAACAACATTTTGTAAGCT
ACAGCCGGTTCCGACTACTACACAAAAGCAAGACTCCAGAGTGAGGCCGT
CTGTAGATAGCGGCATCGGAGGTTCGAACCCCAGCAACGGTCTGTCGGCT
GAAAAGAATAGACCTAGCCCTCTGCTTATCGATACCACTCCCAAAAGGTA
TTCAAAAGAGGAGATTAACGTAACACTAAAGAACTCGAAAAATGTTGCCT
CAGCTATTTTTAAACAAGTTAGTCGTTTATCTCTTAATGGCGCGTCAACA
AGTGTTGATAAAGATGATAGTTATGACAATGGCGCACTGTCAGTTGAGGA
CGAGGTCGACGAGGAGATCGAGCGAGCCATGAATCAAGTACGTGTTCAAC
CCAAAGGAAAGGGTGAATTTCAAATTGAACGCGAGAAACGCATGTTCAAT
CCGTTCATGTTGCGACAGACACCAAACCTATCTGAAGGGGCGTCCGGTAT
GTGTTGGTCTTTGTCACACCGGATGCCCGGCGAAGGCGGGTTTCGCTCGG
CTACCCCAAAACCGAAACTCCCCGTTGCAAGGAAAAAGAGCATGAGGGAA
GTACTATTACGTCATGAGCACGCTAAAAGCGTAAAAGCCAAGAAAGATCA
ACGTAAACTGGAGAAAATTACGCGTAGAAACCAGAGAGTGCTCGATGTTA
GACAAAGCTTGGAGGATAAGCTACAAGCTATGGCTTCTGGACAGGAAGCA
AAAACTGAACAAACGAGACGACGGCGTCAAGATTTACATACTGCACGTGT
TGGCAAAACGGATCGCCGGTTGGAACTGGCGCGACAACGCCGCAAAGAAA
TAGCAGCCACCGAAAAGAAAACAAAGAAATTATCACTGAGCGTAAGACAA
ATGTAATTAAGCGTCTTTGGCGACGCTTGAAAGGGAACAAACCACAAAAG
AAGCAAACTGTCAACCGAGAAACTGCAGACGAAGTAGTAAAATCAGAAAA
AGTGGAACAAAAATGGTACCATAAGCTGTCATGGTGTGGTAATGACAAAA
ATACGGATACCGAGAACAAAGTCAAAGAAGACTGGGAATTAGCCGTGACC
GGTGAATGCGATTACTCAAAAGGCGATGCATTTCAAGTGAACAGTAGCGA
GACTTTAATAATTGATGGCGAATAGAAGACTGGTGAGGGCAATCACTGAA
AATATTAACCAAGGTAGTAGCGTTTCATTGGTCGATCAGAATAACAATGG
ATTGCGCTCTAAACAATTTCAAGAGGCATCTTGCTGTTCGAGTAAACAAA
AGAGCTGTAATGCTGATAACACATTCATCGTCATTGGAAACAAAATTTTA
AAAACACCTGTAGAAAAAGTTGATGCAGGTGTTGAGGAAAATCGATTAGC
CAACGAAAACGAATATCACCGCACAGGGATTGGTTCAATAGTGGATTTCG
CATCCCCTAAACGAGGATTCCCTATGGTAGATGTTGATTCGTCAGGGTCA
TTCAAACCAGTATCAGAGCCACGTGCTGCTAAGCGTGTAACAACATTTTG
TAAGCTACAGCCGGTTCCGACTACTACACAAAAGCAAGACTCCAGAGTGA
GGCCGTCTGTAGATAGCGGCATCGGAGGTTCGAACCCCAGCAACGGTCTG
TCGGCTGAAAAGAATAGACCTAGCCCTCTGCTTATCGATACCACTCCCAA
AAGGTATTCAAAAGAGGAGATTAACGTAACACTAAAGAACTCGAAAAATG
TTGCCTCAGCTATTTTTAAACAAGTTAGTCGTTTATCTCTTAATGGCGCG
TCAACAAGTGTTGATAAAGATGATAGTTATGACAATGGCGCACTGTCAGT
TGAGGACGAGGTCGACGAGGAGATCGAGCGAGCCATGAATCAAGTACGTG
TTCAACCCAAAGGAAAGGGTGAATTTCAAATTGAACGCGAGAAACGCATG
TTCAATCCGTTCATGTTGCGACAGACACCAAACCTATCTGAAGGGGCGTC
CGGTATGTGTTGGTCTTTGTCACACCGGATGCCCGGCGAAGGCGGGTTTC
GCTCGGCTACCCCAAAACCGAAACTCCCCGTTGCAAGGAAAAAGAGCATG
AGGGAAGTACTATTACGTCATGAGCACGCTAAAAGCGTAAAAGCCAAGAA
AGATCAACGTAAACTGGAGAAAATTACGCGTAGAAACCAGAGAGTGCTCG
ATGTTAGACAAAGCTTGGAGGATAAGCTACAAGCTATGGCTTCTGGACAG
GAAGCAAAAACTGAACAAACGAGACGACGGCGTCAAGATTTACATACTGC
ACGTGTTGGCAAAACGGATCGCCGGTTGGAACTGGCGCGACAACGCCGCA
AAGAAATAGCAGCCACCGAAAAGAAAACAAAGAAATTATCACTGAGCGTA
AGACAAATGTAATTAAGCGTCTTTGGCGACGCTTGAAAGGGAACAAACCA
CAAAAGAAGCAAACTGTCAACCGAGAAACTGCAGACGAAGTAGTAAAATC
AGAAAAAGTGGAACAAAAATGGTACCATAAGCTGTCATGGTGTGGTAATG
ACAAAAATACGGATACCGAGAACAAAGTCAAAGAAGACTGGGAATTAGCC
GTGACCGGTGAATGCGATTACTCAAAAGGCGATGCATTTCAAGTGAACAG
TAGCGAGACTTTAATAATTGATGGCGAATAGAAGACTGGTGAGGGCAATC
ACTGAAAATATTAACCAAGGTAGTAGCGTTTCATTGGTCGATCAGAATAA
CAATGGATTGCGCTCTAAACAATTTCAAGAGGCATCTTGCTGTTCGAGTA
AACAAAAGAGCTGTAATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000106_pilon | genome | sc0000106_pilon:845087..847206 - |
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