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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000106_pilon:733210..736363- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13415.1.p1 ID=MSTRG.13415.1.p1|Name=MSTRG.13415.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3154bp|location=Sequence derived from alignment at sc0000106_pilon:733210..736363- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAGAAGAAGTTGTATTACATCCGCCAGGTATCCAGAAAAAAAAATTAG
ATAGTTTTGAAATTTTCAAAAGATTGGACGTGATTAATCAAAGACCTGTG
GATATTCCTAATCAATCAAAAAATGTTTCGTTTTTCAGTTGTCAGAGATG
ATTCTGATTCACCACAATCGCAAGTGAAACGTGAAAGCCAGGGAGTAGGC
GAAGACATCAACGACGCCAATAAACAAATTCAAACCAAAGATGTTACAAA
CGCTGAAAAGCCAACAACGCAGTCAGATGAAGCTTTTCTAATGAGCCGTG
GCTACTTTTTACTTTCCAAAGGTATTTTAGGAGAAGGCACTTATTCTAAA
GTCAAGAGAGCTTATTCTAAATTTCGTAGTCATGATGTCGCTGTGAAAAT
CGTTAACCGTAAAATCGCACCAAAGGATTTCTTGAAACGCTTTTTACCAC
GCGAGTTGCAAATTATTGGACAAGTTAACCATCCTAACATTTGCAAATAC
TATGAAGTACTCGATGTTGGTCACAAAGTATTTATTATCATGCAACACGC
ACCAAGAGGCGATTTATTAGAATTCATACAATGCAATAGATTTTTGAAGG
AGAATGTAGCTAGACCAATGTTTTTACAGGTATGAACAAAAAAATATTTT
ATAGACCCCGATGAAGAAAGTCATTTTTACCTTTGTTCCATCAAGTCAAC
CCCCCCTTTTGACAATAATTACATGTTTTTTAAAGTTAGTGTACCAAAAA
CTGCTTACAGAATAAAACACGTATGTGCTCCTTTGCTCCTATGGAGTAAA
ACAAACCCAAATAAAAAATCTACAAACTCAGTGATCGGCCATAAACACAA
GGGAAAGTATTAAAGGTTTTATTTTTACATAAGTGTTCCCGTTTCATATC
AGACACATATTTCATACCAGGACAGTTTCTGTCTATTGTTATATTATGCT
GATATAAGCATAAAAAGGTTTTTCTTTTCCTCTTTCTGACCAATCTTGCT
CCACAATCATGTCAATCCAATATGGAAAAGCTTGTGAATTAAAATTGATG
AGTAAGCAAACGATATCACTCTCATTTAAAAACAAAACCTTTAAGGTAAA
AATGGGTTACACTGTCTGCCAAGGAATTCATATTTTATAAAGAATATTCG
GGTATTCAAAAAAACTCATGCTAAAAATATTTACAATTTAAAATTAAAAA
TGCGTTTAAAAATAAATATACATACAAATAAGAAAATTAATGTTAGGGAT
ATACTTGCTCCTTTGCCAGAGTCTAAATATAACCTCGAATTTGGACTGCA
GTAAATGACCTTTGAAATAATCCAGCATTTCTTATTTCAGTTTTGGATTC
TTAGTATAGTTATGGTTTACGTCGAAACATCAATTTGAATTTTTTCCTAT
TCTTCATCAACTCCCTTTTCACAGACCAACTGAGAAAAATTCATCAACTC
CCTTCTCACAGAAGGCCAAAATATTGGGGTAAGACTGTATAACTAACCTA
TTCAATGTTTCTGTTGTTATAGATTGCCCATGCTCTGGCGTACCTACACT
CGTACAACATCTTACACAGAGATTTAAAATGTGAAAACATCTTATTAAGC
CATGATTTGAAACCACTTCTAACAGACTTTGGATTTGCTAAACATTTACC
AAAATTCCATGAACTGAACAAGACGTTTTGTGGAAGTTCAGCATATGCTC
CCATCGAAATTTTAAAAGGTGAGATTTGTTTTGCATGACTTTAAAAATTT
TCCTTAACAAAATCCAGGGGAAGTTAGGCAAAAATAGGCTTGGTATGTGC
ATTTCTAAGCGTTTCAAAAATAACAAAAAGTCTCCCTAAGGATTTTTCGA
AAATCGTCCTGTTAGGGTCACTTTTTCTCTAAAGTTTGGTCTCTCTAAGG
GTCGGTCTTCTGAGGTCTGGTCAGCACATTTTCTCCAGCCCTCCCTCATC
CCCTGTACGAAATAAACTCTTTTCTTGAGATACTGTAAACTATTTCAGAG
TCTATTTTTCATAGGTTTATGTTCTTGCTCAAGTAACTCGTCGGATCGTG
TCTTTGTATCAAACATTGCTAACAAAATACATTAAATTTCTGTAACTATC
CTTTCAAATTCTCTTGAAGGGTGAAGTCGAGTCATCGATTCTCAGTCCAA
TATATAGAAAAAATAATAAGTTGATTCAATATCCTTATAGGAATTCCTTA
CGATGGACCCAGTGCTGAAGTTTGGAGTTTGGGTTGCATTCTATACATCA
TTTCAACAGGCACTATGCCTTTCGACGATTCAAACAAAGCAGATCAAATC
CGACAAATGAAAAAAGGTCCAAACTTCACAAGAACAAAACAGATGGTATC
GAATGAGTTACGTTCTTTAATAATGTCCATGTTGGAAACTAATCCACAAA
AACGAATCACTTTGAATGAAATCCCAAACCAAGAATGGTCTAAGAAAATT
GCAGAAACGAACAATACAGCTGATAACGATCAAAACCAATCAGAAAATTT
ATGAAAAATATTTAACCATTTAACTTATCTTTCTTAGTATACTTTTGTAA
ATATTACCTTTTCTCTATATGTTTTTTAATTTCGAATTATATAATTGCAT
TTTTAATAAACTGCAAATCTCAATTTCTTCCTCCTTCCTAACAGTAACGT
TGTGTCCCCTCGCTAAAGCACCCGTTTTTTGGGACCAAAAGATTCTCTGG
TCACACTTACTTAGCGCGTCTTTCCTATTCACACTCTCCTCCGAAATAGC
AGTACTAAGCCAAAAGAGGACAATTTCTAGCTTGTTTTGCTCACATGTCT
AACTGGATGGGCGCCAAAATACAAACTTGGAAATTTGCCTCCGAATTAGC
CAATTTTGGATTGAATGTACATCATCAAAACTATTATCCCACTTTTCGAA
CTCAATGTTTCGATTTCAAAATTATCTTGCTATATTTTACCGGGGTCCAA
AAATTCCTGACGAAATATTTTCAGTGGCGGAACCACGAGGTTTCGTAATA
GGGCCTTGGAAACATTTTTTTCTCGAATAGAAATCAAGAAAAACTTTTAA
AAGTGACACCATAAAAAACCTCCGGTTTCTTGAAAAATCAAACATTACAT
GTTTTTTTTTTTATAAGCATTGCACTTATAAGCATATCTAGGCTCAGATG
TGGG Coding sequence (CDS) from alignment at sc0000106_pilon:733210..736363- >MSTRG.13415.1.p1 ID=MSTRG.13415.1.p1|Name=MSTRG.13415.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3051bp|location=Sequence derived from alignment at sc0000106_pilon:733210..736363- (Clytia hemisphaerica_ch_hm2_pilon)
GAATTCCTTACGATGGACCCAGTGCTGAAGTTTGGAGTTTGGGTTGCATT
CTATACATCATTTCAACAGGCACTATGCCTTTCGACGATTCAAACAAAGC
AGATCAAATCCGACAAATGAAAAAAGGTCCAAACTTCACAAGAACAAAAC
AGATGGTATCGAATGAGTTACGTTCTTTAATAATGTCCATGTTGGAAACT
AATCCACAAAAACGAATCACTTTGAATGAAATCCCAAACCAAGAATGGTC
TAAGAAAATTGCAGAAACGAACAATACAGCTGATAACGATCAAAACCAAT
CAGAAAATTTATGAATTGCCCATGCTCTGGCGTACCTACACTCGTACAAC
ATCTTACACAGAGATTTAAAATGTGAAAACATCTTATTAAGCCATGATTT
GAAACCACTTCTAACAGACTTTGGATTTGCTAAACATTTACCAAAATTCC
ATGAACTGAACAAGACGTTTTGTGGAAGTTCAGCATATGCTCCCATCGAA
ATTTTAAAAGATGTTTCGTTTTTCAGTTGTCAGAGATGATTCTGATTCAC
CACAATCGCAAGTGAAACGTGAAAGCCAGGGAGTAGGCGAAGACATCAAC
GACGCCAATAAACAAATTCAAACCAAAGATGTTACAAACGCTGAAAAGCC
AACAACGCAGTCAGATGAAGCTTTTCTAATGAGCCGTGGCTACTTTTTAC
TTTCCAAAGGTATTTTAGGAGAAGGCACTTATTCTAAAGTCAAGAGAGCT
TATTCTAAATTTCGTAGTCATGATGTCGCTGTGAAAATCGTTAACCGTAA
AATCGCACCAAAGGATTTCTTGAAACGCTTTTTACCACGCGAGTTGCAAA
TTATTGGACAAGTTAACCATCCTAACATTTGCAAATACTATGAAGTACTC
GATGTTGGTCACAAAGTATTTATTATCATGCAACACGCACCAAGAGGCGA
TTTATTAGAATTCATACAATGCAATAGATTTTTGAAGGAGAATGTAGCTA
GACCAATGTTTTTACAGGAATTCCTTACGATGGACCCAGTGCTGAAGTTT
GGAGTTTGGGTTGCATTCTATACATCATTTCAACAGGCACTATGCCTTTC
GACGATTCAAACAAAGCAGATCAAATCCGACAAATGAAAAAAGGTCCAAA
CTTCACAAGAACAAAACAGATGGTATCGAATGAGTTACGTTCTTTAATAA
TGTCCATGTTGGAAACTAATCCACAAAAACGAATCACTTTGAATGAAATC
CCAAACCAAGAATGGTCTAAGAAAATTGCAGAAACGAACAATACAGCTGA
TAACGATCAAAACCAATCAGAAAATTTATGAATTGCCCATGCTCTGGCGT
ACCTACACTCGTACAACATCTTACACAGAGATTTAAAATGTGAAAACATC
TTATTAAGCCATGATTTGAAACCACTTCTAACAGACTTTGGATTTGCTAA
ACATTTACCAAAATTCCATGAACTGAACAAGACGTTTTGTGGAAGTTCAG
CATATGCTCCCATCGAAATTTTAAAAGATGTTTCGTTTTTCAGTTGTCAG
AGATGATTCTGATTCACCACAATCGCAAGTGAAACGTGAAAGCCAGGGAG
TAGGCGAAGACATCAACGACGCCAATAAACAAATTCAAACCAAAGATGTT
ACAAACGCTGAAAAGCCAACAACGCAGTCAGATGAAGCTTTTCTAATGAG
CCGTGGCTACTTTTTACTTTCCAAAGGTATTTTAGGAGAAGGCACTTATT
CTAAAGTCAAGAGAGCTTATTCTAAATTTCGTAGTCATGATGTCGCTGTG
AAAATCGTTAACCGTAAAATCGCACCAAAGGATTTCTTGAAACGCTTTTT
ACCACGCGAGTTGCAAATTATTGGACAAGTTAACCATCCTAACATTTGCA
AATACTATGAAGTACTCGATGTTGGTCACAAAGTATTTATTATCATGCAA
CACGCACCAAGAGGCGATTTATTAGAATTCATACAATGCAATAGATTTTT
GAAGGAGAATGTAGCTAGACCAATGTTTTTACAGGAATTCCTTACGATGG
ACCCAGTGCTGAAGTTTGGAGTTTGGGTTGCATTCTATACATCATTTCAA
CAGGCACTATGCCTTTCGACGATTCAAACAAAGCAGATCAAATCCGACAA
ATGAAAAAAGGTCCAAACTTCACAAGAACAAAACAGATGGTATCGAATGA
GTTACGTTCTTTAATAATGTCCATGTTGGAAACTAATCCACAAAAACGAA
TCACTTTGAATGAAATCCCAAACCAAGAATGGTCTAAGAAAATTGCAGAA
ACGAACAATACAGCTGATAACGATCAAAACCAATCAGAAAATTTATGAAT
TGCCCATGCTCTGGCGTACCTACACTCGTACAACATCTTACACAGAGATT
TAAAATGTGAAAACATCTTATTAAGCCATGATTTGAAACCACTTCTAACA
GACTTTGGATTTGCTAAACATTTACCAAAATTCCATGAACTGAACAAGAC
GTTTTGTGGAAGTTCAGCATATGCTCCCATCGAAATTTTAAAAGATGTTT
CGTTTTTCAGTTGTCAGAGATGATTCTGATTCACCACAATCGCAAGTGAA
ACGTGAAAGCCAGGGAGTAGGCGAAGACATCAACGACGCCAATAAACAAA
TTCAAACCAAAGATGTTACAAACGCTGAAAAGCCAACAACGCAGTCAGAT
GAAGCTTTTCTAATGAGCCGTGGCTACTTTTTACTTTCCAAAGGTATTTT
AGGAGAAGGCACTTATTCTAAAGTCAAGAGAGCTTATTCTAAATTTCGTA
GTCATGATGTCGCTGTGAAAATCGTTAACCGTAAAATCGCACCAAAGGAT
TTCTTGAAACGCTTTTTACCACGCGAGTTGCAAATTATTGGACAAGTTAA
CCATCCTAACATTTGCAAATACTATGAAGTACTCGATGTTGGTCACAAAG
TATTTATTATCATGCAACACGCACCAAGAGGCGATTTATTAGAATTCATA
CAATGCAATAGATTTTTGAAGGAGAATGTAGCTAGACCAATGTTTTTACA
G
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106_pilon | genome | sc0000106_pilon:733210..736363 - |
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