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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000106_pilon:472672..476339- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13405.1.p1 ID=MSTRG.13405.1.p1|Name=MSTRG.13405.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3668bp|location=Sequence derived from alignment at sc0000106_pilon:472672..476339- (Clytia hemisphaerica_ch_hm2_pilon)
AACAAATCATAAACAACAAAAAATCTGACAAAGAGGAAAAAAGGATTCTA
TTCTCGGAGAATCATGTTTAGAACTGTATTCTTAGGTATTCTGTGCATTT
ACTGGTGTGAATGTTCAAAACAAATTTGGAACCATGCTGCTATTGGTAAG
GCGTACGCCTGGCAGCCTTTTTACGAAGTATCTCTTATGGATGAGCGACA
ATGTTTTGGTCAATGCGTTTACAATGAAAAATGTCTCTCATTCGAGGTTT
ATCAAACAGTTCCTCGAAAAGTCGAATGTCGATTGTTTGATTTTGTGTAC
GAGTATTATACCAAATTCAAAGAGCTGGATACTAAAGTGGGGTCAAAGAT
CTATTCGAAACCGTTAGAAAAAGTTTGTACGACATGTAAAAGTTGTCTTG
ATTATTCAAAAAAAGGACACTTGAAAAATGGTGTTTACGAAGTTGATTTG
TTAGGAACACGACGTGGTGTTTATTGCTTCATGGAAGGCGAGGGCGGAGG
GTGGATGGCGTTTCAAAGGCGTTATGATGGTTCAGTTTCATTTGAAGATA
AAGAATGGGCAGAGTACAAAGATGGATTTGGAGATGGGTCAGGTAAGATA
TCTCTGACAAAAGCTTTTGTAATGAATAACAGAAAATCAAAATAAAAAAA
AATCAAGACAAAACTTGATGTTCATTTTACATTCGCAGCATTTAAAGAAG
TACTCGTTTTTTTATAAGAACATCCACAAATTTTGAAGCCTTCGGATGTT
CTTTACTTTTTGAGTTTCAAGCCTAAAAATGTTCTTAATATGTTCTTAAA
TTCCCCATTTTGTGAGTGTGAGTGCCAATTTTCTTAAGAAATCGGGTGTT
TTAGAGTCCACAAAGCCTTAACATATTTTCAACTTCTTAACATTTTAGCC
ATCGAAGCCTTATGTTCTTGTATAGTTTGTTTTTATTTTGAAAACGTGTA
GGATAAAGGAAACCTAAATACTCATAGTGCAGAGTTAAAGTTTTCTTCTT
ATTTCATCAAATTCACAGGAGAATATTGGTTAGGTCTTGAAACACTTCAT
CAGTTGACATCAACGCAATCATATGACTTATACGCGAGGGCGATGGATTT
TTCCGGTGTTTGGGAGAGCAAAAGATTCGCCGGTTTTACCATCGGCTCCG
AGTTAATGGAGAAATACAAATTCGACTTCCAGTCTATCTACAGTGGAACT
CAATACAGCAATCATAGTTTATTTGAAAGAGCGAAGGGCATGAAATTCAG
CACTCCGACCCGTGACAACGATTTGTACACACCAATTCCAACTTGTGCTA
TTAGGTTTCCAGGAGGCAAGCATTATACTCTAAGGTCCCAAATAGTAGGA
GGGGAGGGAGTCCGGATAAAAGGGAAGGGTCCCGAAATTTCTTTTGAACC
GCGAACCTAATTGGCGGGGCCAGTCCTGATAAGAAGAAGGGGAGAATTTC
ATATATTAATAAAGTTCTAATAAACGGGGGAAGGGGTGCGTTCTTTTCGA
GACCTTAGGGTAGGTGAATATTTTGAATTTGTGTCGAAAAAAGATATTTG
CCGTAATTTGGATTACAAACGGCCGTCTTTTAGGCTACGTCATGTTTTCC
TTCCTACTAGCGCTGTTTATTACGAAGACTGGTACCTTATCGGCTCTTTT
TACACCGGCCCTTATTGGCGTTATTTTTGGGCTTGTGGCGTAATAAGGGC
CGGCGTTAAAAGGGCCAAGATTTTGCAATTTTAACCTAAAAGCGGAGTTA
ATTTTTTATCATTATTTCTCAATTCAAAGGATTTTAGGTATGATTGGAAG
ACAAAAATTATTATCCATTGTTTTACTCCAAAATCAGGCTGTGATGTAAT
AAGGGCCGGCGTTTAATTAGAGCCGGCGTAAAAAGGGCCGATAAGGTAGT
CTTTTTGATCGACTATTCGAGATGTGTGAATCCTGACGTGCAATTTCTAC
TTATTGTTTTAAAGGTTGGTGGTTTAGCGATTGTCATTACGATTTCATGA
ACGGAGCCTACTCGCAACAGGAATCTTGTGATAGAGCAACTGGTATTCAT
TGGTACAGACGTTTCGGAGAAAATCACAATAAATGTTTAAAAGAAACTCT
CTTAATGATTAGAGAAAATTAATCAATATTCTACATTCTATAATAGAAAA
ATGTACGTCAAAGATTGTAAATTAGGGGTGATTTGACACACCTGGTACTT
GAGATGCTCTAAAGATGATAGTCGAAATCAAATGCTCTTTCCAACGGCAG
CTAGAGACTTTCTTTGTCCCGGATTAAATCCCCGGCGAGCTTATTTGAGT
GAGGGGCCAACATTTGGAGGCCAACATTTTCGAAAAAATGTCACCCACCA
TGGTTGGGCAACGAAGAAAATTTTTCACATTTTACACCCTCAAAACACCT
TAAAACGATTACCTAATTGGAGAGAATAATTGTTTTTGTGGTTTGATTTG
GTCTCAAACCAGCTTAAAATAGTAACTCTTTAAAACGTATGACATGGTCT
ACCAAAAAGTGGGGGGCCATGGACCCCCGCCCCCCGTTGACGGGGCCCAT
GCCAAGATAACACTATCCTGTACAAACTCGTATTTTGCCTTTTTGACGAA
TTTTACCGTGTGTCGGTCTGTTACGGTTAGAAATTCTGTGTCTCGTTAGT
ACCACTGACCTTTATATATCCCTGGACCAAGTTATTCAATGCCAGCCAAG
CAAAATATTATGATCGGAGTTTTTTTGAAATTGCTATTTGCCGTTAGGCA
AAGTTTCAAACACTACAATTGCTTCTTTGCCGGTACCAACTTTCAAAAAA
CTTCGATCAAAGATGGCGGATATAGCTTGGTCCAGGGACATATAAAGGTC
AGTGGTTAGTATCAACTTTCTGGTACTAAATTATCGAAAAACACGTGCGT
ACTCTTTAAAAAAACGAAAGATACCATTGCATTGAGGAGGATAAGGCAAT
GTCACTTATTTAAGGTAGTTCGAATGTTAAATTAAAACATCTCTCCATCG
CAGAGGCAGAAAATAGAGCACAGATGAAACGGTGGCCTTCCGTACTTCGC
GGTTATTTTCGCAAAGAAGAGTTTCGTACAGGCTAAGATAACACATGCAA
GGAAAGAGTTTGCTTAATTTCCGGAAGTTGAGAAATTTCAACAGGGGTAT
CGATAAAGTTTGGTTGAAATTTTCTTTCTTTTTTTCAAAAACTTTTAATA
GATCTTAGCAAGCAAAATCAGTATTTTTTTCAAGCCTCTTGAAATCTAAA
ATTTAAGATATTGCGATATTGATGATATTACCATCTGGACATTTTTTGGT
GTGAATGACGAATTTATGCACACAAGGACACACTGAAAGTAAAATGCTCA
AAAGAACTTTTTGAATTCCACGGCATTAAAAAATTTTCGGAGAAAATTTG
ACTTGGAAAGAAAAATAACACGAGATTATATACATAGATCACTGTGGTTG
TTGTGTATAATTTATTGAATTATTCATTATTAATTAATATTCGATTCTAA
TTCATTTCATTGTGATGTTATCTTTATTTTTTTGGTGTTTAGGGTGTCAG
AGTAAATTCAAAAAACTGTATATTGAGAACTGTAAATTCTTGAGGTCAGA
TCTCTGATTAATATTTAATTTCTAAATATATTTTGTGGAAATAATGGTAA
GAAATGAAAAATAAAATG Coding sequence (CDS) from alignment at sc0000106_pilon:472672..476339- >MSTRG.13405.1.p1 ID=MSTRG.13405.1.p1|Name=MSTRG.13405.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2952bp|location=Sequence derived from alignment at sc0000106_pilon:472672..476339- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGGTGGTTTAGCGATTGTCATTACGATTTCATGAACGGAGCCTACTCG
CAACAGGAATCTTGTGATAGAGCAACTGGTATTCATTGGTACAGACGTTT
CGGAGAAAATCACAATAAATGTTTAAAAGAAACTCTCTTAATGATTAGAG
AAAATTAAGAGAATATTGGTTAGGTCTTGAAACACTTCATCAGTTGACAT
CAACGCAATCATATGACTTATACGCGAGGGCGATGGATTTTTCCGGTGTT
TGGGAGAGCAAAAGATTCGCCGGTTTTACCATCGGCTCCGAGTTAATGGA
GAAATACAAATTCGACTTCCAGTCTATCTACAGTGGAACTCAATACAGCA
ATCATAGTTTATTTGAAAGAGCGAAGGGCATGAAATTCAGCACTCCGACC
CGTGACAACGATTTGTACACACCAATTCCAACTTGTGCTATTAGGTTTCC
AGGAGATGTTTAGAACTGTATTCTTAGGTATTCTGTGCATTTACTGGTGT
GAATGTTCAAAACAAATTTGGAACCATGCTGCTATTGGTAAGGCGTACGC
CTGGCAGCCTTTTTACGAAGTATCTCTTATGGATGAGCGACAATGTTTTG
GTCAATGCGTTTACAATGAAAAATGTCTCTCATTCGAGGTTTATCAAACA
GTTCCTCGAAAAGTCGAATGTCGATTGTTTGATTTTGTGTACGAGTATTA
TACCAAATTCAAAGAGCTGGATACTAAAGTGGGGTCAAAGATCTATTCGA
AACCGTTAGAAAAAGTTTGTACGACATGTAAAAGTTGTCTTGATTATTCA
AAAAAAGGACACTTGAAAAATGGTGTTTACGAAGTTGATTTGTTAGGAAC
ACGACGTGGTGTTTATTGCTTCATGGAAGGCGAGGGCGGAGGGTGGATGG
CGTTTCAAAGGCGTTATGATGGTTCAGTTTCATTTGAAGATAAAGAATGG
GCAGAGTACAAAGATGGATTTGGAGATGGGTCAGGTTGGTGGTTTAGCGA
TTGTCATTACGATTTCATGAACGGAGCCTACTCGCAACAGGAATCTTGTG
ATAGAGCAACTGGTATTCATTGGTACAGACGTTTCGGAGAAAATCACAAT
AAATGTTTAAAAGAAACTCTCTTAATGATTAGAGAAAATTAAGAGAATAT
TGGTTAGGTCTTGAAACACTTCATCAGTTGACATCAACGCAATCATATGA
CTTATACGCGAGGGCGATGGATTTTTCCGGTGTTTGGGAGAGCAAAAGAT
TCGCCGGTTTTACCATCGGCTCCGAGTTAATGGAGAAATACAAATTCGAC
TTCCAGTCTATCTACAGTGGAACTCAATACAGCAATCATAGTTTATTTGA
AAGAGCGAAGGGCATGAAATTCAGCACTCCGACCCGTGACAACGATTTGT
ACACACCAATTCCAACTTGTGCTATTAGGTTTCCAGGAGATGTTTAGAAC
TGTATTCTTAGGTATTCTGTGCATTTACTGGTGTGAATGTTCAAAACAAA
TTTGGAACCATGCTGCTATTGGTAAGGCGTACGCCTGGCAGCCTTTTTAC
GAAGTATCTCTTATGGATGAGCGACAATGTTTTGGTCAATGCGTTTACAA
TGAAAAATGTCTCTCATTCGAGGTTTATCAAACAGTTCCTCGAAAAGTCG
AATGTCGATTGTTTGATTTTGTGTACGAGTATTATACCAAATTCAAAGAG
CTGGATACTAAAGTGGGGTCAAAGATCTATTCGAAACCGTTAGAAAAAGT
TTGTACGACATGTAAAAGTTGTCTTGATTATTCAAAAAAAGGACACTTGA
AAAATGGTGTTTACGAAGTTGATTTGTTAGGAACACGACGTGGTGTTTAT
TGCTTCATGGAAGGCGAGGGCGGAGGGTGGATGGCGTTTCAAAGGCGTTA
TGATGGTTCAGTTTCATTTGAAGATAAAGAATGGGCAGAGTACAAAGATG
GATTTGGAGATGGGTCAGGTTGGTGGTTTAGCGATTGTCATTACGATTTC
ATGAACGGAGCCTACTCGCAACAGGAATCTTGTGATAGAGCAACTGGTAT
TCATTGGTACAGACGTTTCGGAGAAAATCACAATAAATGTTTAAAAGAAA
CTCTCTTAATGATTAGAGAAAATTAAGAGAATATTGGTTAGGTCTTGAAA
CACTTCATCAGTTGACATCAACGCAATCATATGACTTATACGCGAGGGCG
ATGGATTTTTCCGGTGTTTGGGAGAGCAAAAGATTCGCCGGTTTTACCAT
CGGCTCCGAGTTAATGGAGAAATACAAATTCGACTTCCAGTCTATCTACA
GTGGAACTCAATACAGCAATCATAGTTTATTTGAAAGAGCGAAGGGCATG
AAATTCAGCACTCCGACCCGTGACAACGATTTGTACACACCAATTCCAAC
TTGTGCTATTAGGTTTCCAGGAGATGTTTAGAACTGTATTCTTAGGTATT
CTGTGCATTTACTGGTGTGAATGTTCAAAACAAATTTGGAACCATGCTGC
TATTGGTAAGGCGTACGCCTGGCAGCCTTTTTACGAAGTATCTCTTATGG
ATGAGCGACAATGTTTTGGTCAATGCGTTTACAATGAAAAATGTCTCTCA
TTCGAGGTTTATCAAACAGTTCCTCGAAAAGTCGAATGTCGATTGTTTGA
TTTTGTGTACGAGTATTATACCAAATTCAAAGAGCTGGATACTAAAGTGG
GGTCAAAGATCTATTCGAAACCGTTAGAAAAAGTTTGTACGACATGTAAA
AGTTGTCTTGATTATTCAAAAAAAGGACACTTGAAAAATGGTGTTTACGA
AGTTGATTTGTTAGGAACACGACGTGGTGTTTATTGCTTCATGGAAGGCG
AGGGCGGAGGGTGGATGGCGTTTCAAAGGCGTTATGATGGTTCAGTTTCA
TTTGAAGATAAAGAATGGGCAGAGTACAAAGATGGATTTGGAGATGGGTC
AG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106_pilon | genome | sc0000106_pilon:472672..476339 - |
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