|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000106_pilon:365701..368279+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13401.2.p1 ID=MSTRG.13401.2.p1|Name=MSTRG.13401.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2579bp|location=Sequence derived from alignment at sc0000106_pilon:365701..368279+ (Clytia hemisphaerica_ch_hm2_pilon)
TGGTATGAAAACAATTTGAAGTAAAAGGAACATTTATGCCATCAACCTTC
CCCTTTTGATTTGAGCTTTGACGACACAAGAgcttctttgatattttttg
agaattttctttCTGGAAGAATTAAATTTTCGATTTAAAGATGACTTCAG
GTAAGTTTGGAGAATAATATTACCTTgagattgaaaaaaacaacacctat
tttattgaataagaAAGCAACAGGTTGCAGAATATagaatttaaaagtaa
aatcaactaTCTGTTTTTTAATCTGTTTTAGTATGCATGACCAGTGAAAA
ACATCAATCATTCTAGGGTGAAAGAATTAGGAGTAATATGGTATCTTGTA
AAAAACGTCCtttttttAATGTCTCTCACTTTTAGAATCCAACGAACAAA
CTACTCGAGAAGTATCAACTTCTGCTTCAGAGACACCAAAGCAGGAGACT
CCCGAAGTTGAAGTAGTTCAAGCAGCACAGGCAGCGCTGCAACCAGAAGC
CCCTGCCGCAGAAGCAGCCCTACAACAAGAAGCTCCAGTCCCACAAGCAG
AGGCTTCTGTTGCTGAAGCAGCTCCACAACTAGAAGCTCCAGCCGCAGAA
GCAGAGGCTCCAGTTACAGAAGCAGTCCCTCAACCAGAAGCTCCAGTCGC
AGAAGCAACCCCTCAACCAGAAGCTCCAGTCACAGAAGCAGCCCCTCAAC
CAGAGGCTCCAGTCGCAGAAGCAGTCCCTCAACCAGAAGCTCCAGTCACA
GAAGCAGTCCCACAACCAGAAGCTCCAGCTCCACAAGCAGAGGCTCCTGT
CGCTGAAGCAGCCCCACAACCAGAAGCTCCAGCCCCACAACCAGAGACTC
CCATTGCAGTTCCACAAGCAGAGGCTCCAGTTGTTGAAGCAGCCCCACAA
CCAGAGGCTCCAGTCGCAGAAGCAGCCCCACAACTAGAAGCTCCAGCTGC
AGAAGCAGCCCTGGAAGCAAAGGCTCCAGTTGCAGAAGCAATCCCTCAAC
CAGAAGCTCCAGTCCCACAAGCAGAGGCTCTTGTTGCTGAAGCAGTCCCA
CAACCAGAGGCTCCCATTGCAGAAGCAGTTCCACAAGCACAGGCTCCAGT
TGTTGAAGCAGCCCCACAACCAGAGGCTTCAGTCGCAGAAGCAGCCCCAC
AACCAGAAACTCCAGCTGCAGAAACAGCCCTAGAAGCAGAGGCCCCAGTT
GCAGAAGCAGTCCCTCAACCAGAAGCTCCAGTCCCACAAGCAGAGGCTCT
TGTTGCTGAAGCAGCCCCACAATCAGAGACTCCCATTGCAGAAGCAGTTC
CACAAACACAAGCTCCAGTTGTTGAAGCAGCCCCACAACCAGAGGCTCCA
GTCGCAGAAGCAGCCCCACAACCAGAGGCTCCAGTTGCAGAAGCAGTTCC
ACAAACACAAGCTCCAGTTGTTGAAGCAGCCCCACAACCAGAGGCTCCAG
TCGCAGAAGCAGCCCCACAACCAGAGGCTCCAGTTGCAGAAGCTCCAGTT
GTAGAAGCAGTCCCTCAACCAGAAGCTCCAGTCGCTGAAGCAGCCCCTCA
ACCAGAAGTTCCAGTAGCAGAATCAGCTCCACAACCGAAGGCTCCTGCTG
CAGAAGTAGCCCCACAACCAGAAGCTCCAGTCCCACAATCAGAGGCTCCT
GTCGCTGAAGCAGTCCCACAACCAGAGGTTCCAGCCGCAGAATCTGCCCC
ACAAGCAGAGGCCCCAGCCGCAAAAGCAGCCTCACAAACAGAAACTCCTA
ACCAACAGCCAGAAGCAGCCCCTCAACCGGAAGCTCCAGCTGCAGAAGTA
TCCCAACCTTCAGAGCCAGTCGCATGACTCTGTGTGTGTTTATAGTATGA
TGTATGAGTATGATTAAATGAATACCCCTTAGTGCCTTAGCCGTTTTTCC
ATATAACCTTAAACCGTATTTGTTTTCTTAATGACTTTTAAACTTCTTTT
GAATGAATATATTGATGTATGAGGTACGGGGGTATCATTTGATTCCTTGT
ATATTCTTTGGAAAGCTGCTTGGATATCGGTGGAGaagagaaaattcaaa
aacgCTCCTCATCAATACTTTTGAATTTACTGCATCGACCTAAGGTTCCT
CCTTGATGCTCGCAAAGATTACTAAGCAACATTGGTTATTGTGAATTCAG
TTCCAATACAAATAACGTTGACCAGCTCATTGAGTTGAAGAACATAATTT
CTTGATAAATGGAAAATTTGTGAGAAATCATACAATAAGAAGCCATCCAA
AGACGGTAAAGTGAGCAACAGTTACACTTTATTGGGAAAAATAGTCGAAT
CGAGAATGAATGACATTTATAAgggatttatttttgaattagtTACCTGA
CTGAGAAAAATCTTGAATCTTTTTCCTGAACAGGAATTGTTTATTTGAAT
AACAAGTTTTTCGGTTTTGGTCATGGTAAAAAAGTAGTTTTTCTATTTCG
CACATTCTTTGTAATTATTGTTAAATAGATTATTTTATTTAAGAATATCA
ATTGTGACTTTTCCCtgttataaaaatatttaatgcctaattttcatcaa
atcaaaaaagtgaagaaacaGTTAATAAA Coding sequence (CDS) from alignment at sc0000106_pilon:365701..368279+ >MSTRG.13401.2.p1 ID=MSTRG.13401.2.p1|Name=MSTRG.13401.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3582bp|location=Sequence derived from alignment at sc0000106_pilon:365701..368279+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTCAGAATCCAACGAACAAACTACTCGAGAAGTATCAACTTCTGC
TTCAGAGACACCAAAGCAGGAGACTCCCGAAGTTGAAGTAGTTCAAGCAG
CACAGGCAGCGCTGCAACCAGAAGCCCCTGCCGCAGAAGCAGCCCTACAA
CAAGAAGCTCCAGTCCCACAAGCAGAGGCTTCTGTTGCTGAAGCAGCTCC
ACAACTAGAAGCTCCAGCCGCAGAAGCAGAGGCTCCAGTTACAGAAGCAG
TCCCTCAACCAGAAGCTCCAGTCGCAGAAGCAACCCCTCAACCAGAAGCT
CCAGTCACAGAAGCAGCCCCTCAACCAGAGGCTCCAGTCGCAGAAGCAGT
CCCTCAACCAGAAGCTCCAGTCACAGAAGCAGTCCCACAACCAGAAGCTC
CAGCTCCACAAGCAGAGGCTCCTGTCGCTGAAGCAGCCCCACAACCAGAA
GCTCCAGCCCCACAACCAGAGACTCCCATTGCAGTTCCACAAGCAGAGGC
TCCAGTTGTTGAAGCAGCCCCACAACCAGAGGCTCCAGTCGCAGAAGCAG
CCCCACAACTAGAAGCTCCAGCTGCAGAAGCAGCCCTGGAAGCAAAGGCT
CCAGTTGCAGAAGCAATCCCTCAACCAGAAGCTCCAGTCCCACAAGCAGA
GGCTCTTGTTGCTGAAGCAGTCCCACAACCAGAGGCTCCCATTGCAGAAG
CAGTTCCACAAGCACAGGCTCCAGTTGTTGAAGCAGCCCCACAACCAGAG
GCTTCAGTCGCAGAAGCAGCCCCACAACCAGAAACTCCAGCTGCAGAAAC
AGCCCTAGAAGCAGAGGCCCCAGTTGCAGAAGCAGTCCCTCAACCAGAAG
CTCCAGTCCCACAAGCAGAGGCTCTTGTTGCTGAAGCAGCCCCACAATCA
GAGACTCCCATTGCAGAAGCAGTTCCACAAACACAAGCTCCAGTTGTTGA
AGCAGCCCCACAACCAGAGGCTCCAGTCGCAGAAGCAGCCCCACAACCAG
AGGCTCCAGTTGCAGAAGCAGTTCCACAAACACAAGCTCCAGTTGTTGAA
GCAGCCCCACAACCAGAGGCTCCAGTCGCAGAAGCAGCCCCACAACCAGA
GGCTCCAGTTGCAGAAGCTCCAGTTCCAGAAGCAGCCCCTCAACCGGAAG
CTCCAGCTGCAGAAGTATCCCAACCTTCAGAGCCAGTCGCATGAATGACT
TCAGAATCCAACGAACAAACTACTCGAGAAGTATCAACTTCTGCTTCAGA
GACACCAAAGCAGGAGACTCCCGAAGTTGAAGTAGTTCAAGCAGCACAGG
CAGCGCTGCAACCAGAAGCCCCTGCCGCAGAAGCAGCCCTACAACAAGAA
GCTCCAGTCCCACAAGCAGAGGCTTCTGTTGCTGAAGCAGCTCCACAACT
AGAAGCTCCAGCCGCAGAAGCAGAGGCTCCAGTTACAGAAGCAGTCCCTC
AACCAGAAGCTCCAGTCGCAGAAGCAACCCCTCAACCAGAAGCTCCAGTC
ACAGAAGCAGCCCCTCAACCAGAGGCTCCAGTCGCAGAAGCAGTCCCTCA
ACCAGAAGCTCCAGTCACAGAAGCAGTCCCACAACCAGAAGCTCCAGCTC
CACAAGCAGAGGCTCCTGTCGCTGAAGCAGCCCCACAACCAGAAGCTCCA
GCCCCACAACCAGAGACTCCCATTGCAGTTCCACAAGCAGAGGCTCCAGT
TGTTGAAGCAGCCCCACAACCAGAGGCTCCAGTCGCAGAAGCAGCCCCAC
AACTAGAAGCTCCAGCTGCAGAAGCAGCCCTGGAAGCAAAGGCTCCAGTT
GCAGAAGCAATCCCTCAACCAGAAGCTCCAGTCCCACAAGCAGAGGCTCT
TGTTGCTGAAGCAGTCCCACAACCAGAGGCTCCCATTGCAGAAGCAGTTC
CACAAGCACAGGCTCCAGTTGTTGAAGCAGCCCCACAACCAGAGGCTTCA
GTCGCAGAAGCAGCCCCACAACCAGAAACTCCAGCTGCAGAAACAGCCCT
AGAAGCAGAGGCCCCAGTTGCAGAAGCAGTCCCTCAACCAGAAGCTCCAG
TCCCACAAGCAGAGGCTCTTGTTGCTGAAGCAGCCCCACAATCAGAGACT
CCCATTGCAGAAGCAGTTCCACAAACACAAGCTCCAGTTGTTGAAGCAGC
CCCACAACCAGAGGCTCCAGTCGCAGAAGCAGCCCCACAACCAGAGGCTC
CAGTTGCAGAAGCAGTTCCACAAACACAAGCTCCAGTTGTTGAAGCAGCC
CCACAACCAGAGGCTCCAGTCGCAGAAGCAGCCCCACAACCAGAGGCTCC
AGTTGCAGAAGCTCCAGTTCCAGAAGCAGCCCCTCAACCGGAAGCTCCAG
CTGCAGAAGTATCCCAACCTTCAGAGCCAGTCGCATGAATGACTTCAGAA
TCCAACGAACAAACTACTCGAGAAGTATCAACTTCTGCTTCAGAGACACC
AAAGCAGGAGACTCCCGAAGTTGAAGTAGTTCAAGCAGCACAGGCAGCGC
TGCAACCAGAAGCCCCTGCCGCAGAAGCAGCCCTACAACAAGAAGCTCCA
GTCCCACAAGCAGAGGCTTCTGTTGCTGAAGCAGCTCCACAACTAGAAGC
TCCAGCCGCAGAAGCAGAGGCTCCAGTTACAGAAGCAGTCCCTCAACCAG
AAGCTCCAGTCGCAGAAGCAACCCCTCAACCAGAAGCTCCAGTCACAGAA
GCAGCCCCTCAACCAGAGGCTCCAGTCGCAGAAGCAGTCCCTCAACCAGA
AGCTCCAGTCACAGAAGCAGTCCCACAACCAGAAGCTCCAGCTCCACAAG
CAGAGGCTCCTGTCGCTGAAGCAGCCCCACAACCAGAAGCTCCAGCCCCA
CAACCAGAGACTCCCATTGCAGTTCCACAAGCAGAGGCTCCAGTTGTTGA
AGCAGCCCCACAACCAGAGGCTCCAGTCGCAGAAGCAGCCCCACAACTAG
AAGCTCCAGCTGCAGAAGCAGCCCTGGAAGCAAAGGCTCCAGTTGCAGAA
GCAATCCCTCAACCAGAAGCTCCAGTCCCACAAGCAGAGGCTCTTGTTGC
TGAAGCAGTCCCACAACCAGAGGCTCCCATTGCAGAAGCAGTTCCACAAG
CACAGGCTCCAGTTGTTGAAGCAGCCCCACAACCAGAGGCTTCAGTCGCA
GAAGCAGCCCCACAACCAGAAACTCCAGCTGCAGAAACAGCCCTAGAAGC
AGAGGCCCCAGTTGCAGAAGCAGTCCCTCAACCAGAAGCTCCAGTCCCAC
AAGCAGAGGCTCTTGTTGCTGAAGCAGCCCCACAATCAGAGACTCCCATT
GCAGAAGCAGTTCCACAAACACAAGCTCCAGTTGTTGAAGCAGCCCCACA
ACCAGAGGCTCCAGTCGCAGAAGCAGCCCCACAACCAGAGGCTCCAGTTG
CAGAAGCAGTTCCACAAACACAAGCTCCAGTTGTTGAAGCAGCCCCACAA
CCAGAGGCTCCAGTCGCAGAAGCAGCCCCACAACCAGAGGCTCCAGTTGC
AGAAGCTCCAGTTCCAGAAGCAGCCCCTCAACCGGAAGCTCCAGCTGCAG
AAGTATCCCAACCTTCAGAGCCAGTCGCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106_pilon | genome | sc0000106_pilon:365701..368279 + |
|
