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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000106_pilon:143830..146742+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.13388.1.p1 ID=MSTRG.13388.1.p1|Name=MSTRG.13388.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2913bp|location=Sequence derived from alignment at sc0000106_pilon:143830..146742+ (Clytia hemisphaerica_ch_hm2_pilon)
ttttgaccATAAAAGTACACGAGAAGAGAAAGTTAATCGATTCCGTGTCG
ATATCAACAACAATTATATCGATTTCTAGACAGGGAAATTCTTAAGGGAA
TTCCAAAACGAACTTCCAAACACATTATATAAAGCTGCTGGTTTTGGTGA
ATATTTCAAAACGCTTTTTGATGGATCAGAGAAGATTGGGAGAGAAAATT
GTGTTGTGGaaaagtaagtttttatttctcaaaatatgcGAACATATTGC
CCTCTAGACGAGCTGACCCAAAATGCAACCACTTTTGAGTAGCCTGAATA
TCCAGGCTGTAGAATTTTTTGGTTTATCGCCTTGAAAGCGCtttggattt
taaaatttcaaatcagtagcattttccaatttttggctGGTTTGTAAAAT
ACACGACACCGACAGAAGAGTAAAAATGTATGTCACGTGGATTTGCTTca
caaaatttgaccaaaaaagaTGAATGCGAGAAAAAGTTATATGGGCCTAG
ATACGAAGTCATATTTGGTGACAATTTGCAAATTATGaacatttcaaaag
ttatgaagatcGATGGAAAAGTGACGCATTTGgttaaagataagaaaaat
tgCACAATATTCTTAATTATCTTTTGAATTTCACGCAGTATTAATAGTGG
ATACGTCTACAAACCCTTAGCGGGCGGCGTACTCGTCAAAAACCCTCTTC
CCCTTGCAAGGCGATCGCTGCCTTAGGTGTTTATAACAGTAAACATAATT
CTCATTAACAGATCATGAGTCAAAAAGAGAGAGACATTGCTGCTTTGGCG
AAAACCATTTATGGAGAAGCAAGAGGGGAAACGCGAGAGGGACAGTATGC
AGTTGCACATTCTGTTGTCAACCGATTCCATTCTAATAAGTCATGGTTGA
AAGGTTGGTATATCTTATTTTATGTGTGGTAATTAAACCAGTAGAAATCT
AAATGTCTTGAAATCTCGTTGAGAGTAGAACAGCGATCTATCTTCATAAT
GTACAGTGCCGTAgggaagcattttgatattgtaaattttgaaatctaga
gctctaaattggctaaaaacatactcaaaaaataaataaaaaaataaata
ataaaatgattcgaataaaggcaaattttaaaggtaaaatactccatttt
atgaaaaatcactcttatttttaattactggggagggggtctaaGCCCTC
CCTAGCCCCCTAGCACTCTCTTTATACAAACACTAAGTAAATCTTTCAAT
TTAGGAGACACAATCGAGGCAACATGTAAAAAACCACAACAATATTCATG
CTGGAATTCTAATGACATCAACGCAAGTAAACTCCAAAATGCCGGCGCCG
AATTCTATCAAATTGCGAAAGAAGTTATTGATGGACATCACCATGACAAT
ACAAGAGGGGCGTTACATTACCATGCTGATTACGCCAAGGCGGCACACCA
ATGGGCAGATAACAAAACACCGTGTGCGACTATCGGTGCCCATATGTTTT
ATAATAATAtagattgatttgaaaaatcttttatttacacccctgtctca
cagccccggtggaactttttcccacaatGGGGATAAAAGTTTCTATCAaa
gtcccaatggggatagaaattctattgttctcgaGCTTAAAATATCCCAG
aatatccagtggggatggttttggacagcaaatttttgcattgaatttcg
aatggggatgaaatcaaagtcaatttcccagtggggctgaaattgtaggg
tattttgtccaccggggataaaattttagctaaatttttcagtggggcta
tGGGGTCCCAgcgagtctgtgacacaggggtctTTCATTCTTTCTTACAG
TCAGTGTACTAATTTTGTCAAGATGGTACATTTGAGGGTGAGCTGCAAAA
AGTCATACAGTATAAATTGAAATTGtgatcgtaagaacatttatcAGAGG
TCAAATCGAGGGTTCTTTCCTCATTGAATATCCAGATATTTCATTGTTGA
CTGAATGATACTTAACTATATTATCGGCCTTTTATTTTTTACCAGACCAA
AGAGATAATTGAGGTGACACGGAAAGAAAATTTAGGGCTGTATAAATTAC
TCTTGTTTGCCATTGCTATTTTCTTTACTGTAGAATCTTTTGTGTAATTA
GatccgaaaaatattttccccgatCAGGGGCACTATACGTTTTCctactt
ttattacaaaaacaTACATAATGGGGTGGCTCAACTCTCAAATCTCTAAC
AGAGTgcatctcacgtttatcgtttgTAGTACataccagacgtaattaat
caaACAGTTCGTTCGATTACCAGAACTTATCAAACCTTGTCGAACTTATT
AATCGGACAACAaatgacaaagttcgattaaaaataccgttcgattggtt
cgattaattacaTCTGGTATATAGtgcggcaatgaattttgagatTCGTT
CGATAAAGttctttgaatttttatgaTTAGGTTTGTTAAACctaaagaaa
ttcttaaaatgttACTCCTAAAgtgactttttacaaaaatttctttgctc
tcgtggaaaaaatattttagtttttgaaaaaaaatcttttttaatttttt
atgaataatattgttttttAACATGGAAATTGATTAACCAGATCAGCCTG
CTAACTGAGCTGGCTCTATTTTCTAAGCAAATCAATTGACCAGTAGTTTT
AAAactgggaaaaaaaattttcttcagtgGATTTCTTTTCTTTCGCGAGC
GACAGTTCGATTTTGATCGAGGTTTCGATCGTAAATCGATCGATTGACAC
attcctgtctcacagccccggtggtaCTTTtttacTcAgTgggtatgtaa
aaattcttattgaaatcccacattgggatagaaattccattgttcaaaga
ataaaaaatccag Coding sequence (CDS) from alignment at sc0000106_pilon:143830..146742+ >MSTRG.13388.1.p1 ID=MSTRG.13388.1.p1|Name=MSTRG.13388.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=804bp|location=Sequence derived from alignment at sc0000106_pilon:143830..146742+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTCAAAAAGAGAGAGACATTGCTGCTTTGGCGAAAACCATTTATGG
AGAAGCAAGAGGGGAAACGCGAGAGGGACAGTATGCAGTTGCACATTCTG
TTGTCAACCGATTCCATTCTAATAAGTCATGGTTGAAAGGAGACACAATC
GAGGCAACATGTAAAAAACCACAACAATATTCATGCTGGAATTCTAATGA
CATCAACGCAAGTAAACTCCAAAATGCCGGCGCCGAATTCTATCAAATTG
CGAAAGAAGTTATTGATGGACATCACCATGACAATACAAGAGGGGCGTTA
CATTACCATGCTGATTACGCCAAGGCGGCACACCAATGGGCAGATAACAA
AACACCGTGTGCGACTATCGGTGCCCATATGTTTTATAATAATAtagatt
gaATGAGTCAAAAAGAGAGAGACATTGCTGCTTTGGCGAAAACCATTTAT
GGAGAAGCAAGAGGGGAAACGCGAGAGGGACAGTATGCAGTTGCACATTC
TGTTGTCAACCGATTCCATTCTAATAAGTCATGGTTGAAAGGAGACACAA
TCGAGGCAACATGTAAAAAACCACAACAATATTCATGCTGGAATTCTAAT
GACATCAACGCAAGTAAACTCCAAAATGCCGGCGCCGAATTCTATCAAAT
TGCGAAAGAAGTTATTGATGGACATCACCATGACAATACAAGAGGGGCGT
TACATTACCATGCTGATTACGCCAAGGCGGCACACCAATGGGCAGATAAC
AAAACACCGTGTGCGACTATCGGTGCCCATATGTTTTATAATAATAtaga
ttga
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106_pilon | genome | sc0000106_pilon:143830..146742 + |
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